| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN74198.1 hypothetical protein VITISV_005765 [Vitis vinifera] | 8.0e-66 | 40.56 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW++Q++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+ L+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V++ +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VRY+P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| RVW17810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.6e-66 | 40.85 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V++ +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| RVW62119.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 6.1e-66 | 40.85 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V + +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| RVW73393.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.6e-66 | 40.85 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V++ +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| TKS02608.1 hypothetical protein D5086_0000161380 [Populus alba] | 1.4e-65 | 37.99 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +FGYWKMQ++D L KK+H L +P++M E+W+ LD + + IR+ LS VA V E + KLMEAL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT-----
++M E+ SV ++N T+ NQL SV+IEF DE+ + LL LP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ G AL +
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT-----
Query: ---------------------------------KGHFKYQCRKFKEDQKRKPEANI--VEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSF
GHF C K K+ + A V++ ++ V+S +WILDS AS H + ++
Subjt: ---------------------------------KGHFKYQCRKFKEDQKRKPEANI--VEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSF
Query: TGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYIC--QLNVAKGS
GG HG+V + +G K GIGDV +KT G L++VR+VP +K LIS+G+L D G+ F K+ + V+A G TL +L V++ +
Subjt: TGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYIC--QLNVAKGS
Query: KKQWMSVK
+ +W ++K
Subjt: KKQWMSVK
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9GZ72 Uncharacterized protein | 2.1e-67 | 40.26 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +FGYWKMQ++D L KK+H L ++P +M D +W LD + + IR+ LS +A V ETT V LM AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMTKGHFK
++M+E A+V ++NE T+ NQL SV+IEF DE+ + +L LP+SWE M+ AVSNS G LK+ ++ DL ++EE+RR+ + ++ G A V +
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMTKGHFK
Query: YQCRKFKEDQKRKPEANIVEE--VVLACVESDTKY-NNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLR
+ + K D ++ A + +E VVL+ E ++ +N +W++DSAA+ H+ + LFT++ G G V+MGN SK GIGDV +KT G ++L+
Subjt: YQCRKFKEDQKRKPEANIVEE--VVLACVESDTKY-NNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLR
Query: DVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYICQLNVAKGSKKQWMSVKAADGSCRGTVQPAARI
+VR+VP++ NLIS + GY G+ + KL VVA G LY+ ++ K KK++ +V G+ + T+Q +
Subjt: DVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYICQLNVAKGSKKQWMSVKAADGSCRGTVQPAARI
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| A0A438C3I2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-66 | 40.85 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V++ +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| A0A438FQ91 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-66 | 40.85 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V + +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| A0A438GME7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-66 | 40.85 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW+MQ++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+AL+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V++ +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VR++P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| A5B5N4 Integrase catalytic domain-containing protein | 3.9e-66 | 40.56 | Show/hide |
Query: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
G+ KFDG +F YW++Q++D L +K+H L +P+ M E+W LD + + IR+ LS VA V E T LM+ L+ YEKPS NNKV+L+KKLFN
Subjt: GVMKFDGKNFGYWKMQVKDCLSCKKVH-KSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKLFN
Query: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
++M+E+ASV ++NE T+ NQL SV+I+F DE+ + +L LP+SWE M+ AVSNSTG LK++++ DL +AEEIRR+ + + S G AL + +G
Subjt: MQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGPALVMT---KG
Query: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
HFK QC +K ED V++ +L V+S DW+LDS AS H R + ++ G G V + +G G+GDV + G
Subjt: HFKYQC---RKFKEDQKRKPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
+L VRY+P+++ NLIS+G+L D+G+ F K+ ++V+A G TLY+
Subjt: VLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTLYI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-41 | 31.95 | Show/hide |
Query: VMKFDGKN-FGYWKMQVKDCLSCKKVHKSL---KERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKL
V KF+G N F W+ +++D L + +HK L ++P M EDW LDE A + IR+ LS DV + + E TA + L + Y + NK+YL K+L
Subjt: VMKFDGKN-FGYWKMQVKDCLSCKKVHKSL---KERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVYLVKKL
Query: FNMQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGPALVM---
+ + MSE + ++N LI QL ++ ++ +E I LL LP S++ + T + + G T++ +V L + E++R++ N+ G AL+
Subjt: FNMQMSEDASVNFYINEVTTLINQLKSVKIEFSDEVNVIPLLTFLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGPALVM---
Query: -----------------------------------TKGHFKYQC---RKFK-EDQKRKPEANIV------EEVVLACVESD--TKYNNHSSDWILDSAAS
GHFK C RK K E +K + N + VVL E + + S+W++D+AAS
Subjt: -----------------------------------TKGHFKYQC---RKFK-EDQKRKPEANIV------EEVVLACVESD--TKYNNHSSDWILDSAAS
Query: VHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTL
H R LF + G G V+MGN SK GIGD+ +KT G LVL+DVR+VP+++MNLIS L DGY F +++ +L S V+A G + TL
Subjt: VHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFRSQVVAVGHTKSTL
Query: YICQLNVAKG
Y + +G
Subjt: YICQLNVAKG
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| P25601 Putative transposon Ty5-1 protein YCL075W | 2.6e-06 | 36.78 | Show/hide |
Query: CVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
C+ S T SS+WI D+ + H+ DRS+F+SFT G G + G G V++ G + L DV YVP++ +NLIS+
Subjt: CVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-06 | 37.29 | Show/hide |
Query: SSDWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLAD-DGYMCEFGSRQCKLK
S++W+LDS A+ HI SD SL +TGG V + +G T G SL T+ L L ++ YVPNI NLIS+ +L + +G EF ++K
Subjt: SSDWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLAD-DGYMCEFGSRQCKLK
Query: FRSQVVAV--GHTKSTLY
+ V + G TK LY
Subjt: FRSQVVAV--GHTKSTLY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.2e-05 | 35.29 | Show/hide |
Query: HSSDWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYM-CEFGSRQCKL
++++W+LDS A+ HI SD S +TGG V + +G T G SL T L L V YVPNI NLIS+ +L + + EF ++
Subjt: HSSDWILDSAASVHIASD---RSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLADDGYM-CEFGSRQCKL
Query: KFRSQVVAV--GHTKSTLY
K + V + G TK LY
Subjt: KFRSQVVAV--GHTKSTLY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G20980.1 Gag-Pol-related retrotransposon family protein | 1.5e-06 | 30.28 | Show/hide |
Query: NIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKT-----RGIGDVSLKTECGGKLVLRDVRYVPNIKMNLIS
+++ EV E +KY H + W++ S S H+ FT+ V+ +G S+T GIGDV+ T G K +++V YVP I+ N +S
Subjt: NIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKT-----RGIGDVSLKTECGGKLVLRDVRYVPNIKMNLIS
Query: IGKLADDGY
+ +L +G+
Subjt: IGKLADDGY
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| AT3G21000.1 Gag-Pol-related retrotransposon family protein | 2.6e-06 | 20.45 | Show/hide |
Query: RPKEMSD-EDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVY-----LVKKLFNMQMSEDASVNFYINEVTTLINQLKSVK
+P+E+S D+ D +A+ ++ L+ V ++A + + L E+ + L K+L +++M + S + Y+++ ++ +L K
Subjt: RPKEMSD-EDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKVY-----LVKKLFNMQMSEDASVNFYINEVTTLINQLKSVK
Query: IEFSDEVNVIPLLTFLPDSWETMKTA------VSNSTGNNTLKF---------SEVCDLAIAEEIRRQGSNKESTVGPALVMTKGHFKYQCRKFKEDQKR
+E SD + T L S++ + + V T + +++ +E + +++R + S E G L H + C+ K
Subjt: IEFSDEVNVIPLLTFLPDSWETMKTA------VSNSTGNNTLKF---------SEVCDLAIAEEIRRQGSNKESTVGPALVMTKGHFKYQCRKFKEDQKR
Query: KPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
+ E IV + L V + WI+ A +++ FT+ V +G G GDV ++ + G K +R+V +VP + N++S
Subjt: KPEANIVEEVVLACVESDTKYNNHSSDWILDSAASVHIASDRSLFTSFTGGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
Query: GKLADDGYMCEFG
GK+ Y G
Subjt: GKLADDGYMCEFG
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| AT3G29785.1 unknown protein | 1.8e-10 | 37.5 | Show/hide |
Query: KFDGKNFGYWKMQVKDCLSCKKVHKSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKV
K DG ++ + +M+++D L KK+H+ L ++ + MS +DW L + + IR+ +S ++A VA E + LM+ L++ Y+KPSTNN V
Subjt: KFDGKNFGYWKMQVKDCLSCKKVHKSLKERPKEMSDEDWEALDEEAIATIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSTNNKV
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