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Lag0035615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr3:25523042..25529941
RNA-Seq ExpressionLag0035615
SyntenyLag0035615
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054064.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-1552.13Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA
        MNDVD DQ +K MDLEM+S+YFNS+W+LV+L +GV  +  K        +S G+V+   +++  V K HG+ LSKE CP+TPQ+VEDMR+ PYA
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA

KAA0062799.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-1240.52Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEA-------------------SSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPET
        + DVD D+ IK M+LE++S+YFNS+WDLV+ LDGV  +  K +                   +  +      + E T S V+    MHG+ LSKE CP+T
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEA-------------------SSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPET

Query:  PQDVEDMRYKPYAVGI
        PQDVE+MR+ PYA  +
Subjt:  PQDVEDMRYKPYAVGI

KAA0067075.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-1250Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA
        MNDV  DQ +K MDLEM+S+YFNS+W LV+L +GV  +  K        +S G+V+   +++  V K HG+ LSKE CP+TPQ+VEDMR   YA
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA

TYJ96755.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-1240.52Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEA-------------------SSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPET
        + DVD D+ IK M+LE++S+YFNS+WDLV+ LDGV  +  K +                   +  +      + E T S V+    MHG+ LSKE CP+T
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEA-------------------SSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPET

Query:  PQDVEDMRYKPYAVGI
        PQDVE+MR+ PYA  +
Subjt:  PQDVEDMRYKPYAVGI

TYJ96859.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-1552.13Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA
        MNDVD DQ +K MDLEM+S+YFNS+W+LV+L +GV  +  K        +S G+V+   +++  V K HG+ LSKE CP+TPQ+VEDMR+ PYA
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA

TrEMBL top hitse value%identityAlignment
A0A5A7UFT7 Gag/pol protein1.2e-1552.13Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA
        MNDVD DQ +K MDLEM+S+YFNS+W+LV+L +GV  +  K        +S G+V+   +++  V K HG+ LSKE CP+TPQ+VEDMR+ PYA
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA

A0A5D3BCS4 Gag/pol protein1.2e-1552.13Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA
        MNDVD DQ +K MDLEM+S+YFNS+W+LV+L +GV  +  K        +S G+V+   +++  V K HG+ LSKE CP+TPQ+VEDMR+ PYA
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA

A0A5D3BE74 Gag/pol protein2.8e-1240.52Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEA-------------------SSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPET
        + DVD D+ IK M+LE++S+YFNS+WDLV+ LDGV  +  K +                   +  +      + E T S V+    MHG+ LSKE CP+T
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEA-------------------SSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPET

Query:  PQDVEDMRYKPYAVGI
        PQDVE+MR+ PYA  +
Subjt:  PQDVEDMRYKPYAVGI

A0A5D3DA15 Gag/pol protein2.8e-1239.1Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGV---------------------VLLTL----------KEASSSFPNESLGEVELTLSQVSYVY---
        MNDVD DQ +K MDLEM+S+YFNS+W+LV+L +GV                     +LL++           +  ++F N +L E  + +SQ+       
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGV---------------------VLLTL----------KEASSSFPNESLGEVELTLSQVSYVY---

Query:  --KMHGILLSKELCPETPQDVEDMRYKPYAVGI
          K HG+ LSKE CP+TPQ+VEDMR  PYA  +
Subjt:  --KMHGILLSKELCPETPQDVEDMRYKPYAVGI

A0A5D3DS77 Gag/pol protein7.4e-1350Show/hide
Query:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA
        MNDV  DQ +K MDLEM+S+YFNS+W LV+L +GV  +  K        +S G+V+   +++  V K HG+ LSKE CP+TPQ+VEDMR   YA
Subjt:  MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATGTTGACAACGACCAGAGGATTAAAGTCATGGACCTGGAAATGAAGTCTTTGTATTTCAATTCCATCTGGGATCTTGTAAATTTGCTTGATGGGGTTGTCTT
ACTGACATTAAAAGAGGCTAGCAGCTCATTTCCAAATGAAAGTTTGGGAGAAGTTGAGCTAACCTTGTCTCAAGTGTCTTATGTCTACAAGATGCATGGAATTCTGTTGT
CTAAGGAACTGTGTCCTGAGACACCTCAAGATGTTGAGGACATGAGATATAAGCCCTATGCAGTAGGGATTGTCAGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTT
CTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGAGCCAGAGAGGATAGCAGGGCAATCTTGTGGTGGTGTCCCAAGATTTCATTT
TTGGTCCCTTGCATTCAAGAAGGCGTTCTTGAAGAATTCAGAGTCGTCAGACGACGAAAACAGAGGGAAACTGGAAATTACCCAAAAATGCGACCGCATTTTTGGGAAGG
CTAATTTCAAATACGACCGCATTTCTGGAAAAACAGAGGTCGTTTTGAGTTCGTCGCGGGTCGTTTTGAACGAGACTTTTGCGCACCTAACCGACCGTTTTGACCCCGAA
AATGACTGGGTTACCTACCAGCACTTATTTCGTGGCTCCTCAACCACTCCCCACACTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATGTTGACAACGACCAGAGGATTAAAGTCATGGACCTGGAAATGAAGTCTTTGTATTTCAATTCCATCTGGGATCTTGTAAATTTGCTTGATGGGGTTGTCTT
ACTGACATTAAAAGAGGCTAGCAGCTCATTTCCAAATGAAAGTTTGGGAGAAGTTGAGCTAACCTTGTCTCAAGTGTCTTATGTCTACAAGATGCATGGAATTCTGTTGT
CTAAGGAACTGTGTCCTGAGACACCTCAAGATGTTGAGGACATGAGATATAAGCCCTATGCAGTAGGGATTGTCAGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTT
CTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGAGCCAGAGAGGATAGCAGGGCAATCTTGTGGTGGTGTCCCAAGATTTCATTT
TTGGTCCCTTGCATTCAAGAAGGCGTTCTTGAAGAATTCAGAGTCGTCAGACGACGAAAACAGAGGGAAACTGGAAATTACCCAAAAATGCGACCGCATTTTTGGGAAGG
CTAATTTCAAATACGACCGCATTTCTGGAAAAACAGAGGTCGTTTTGAGTTCGTCGCGGGTCGTTTTGAACGAGACTTTTGCGCACCTAACCGACCGTTTTGACCCCGAA
AATGACTGGGTTACCTACCAGCACTTATTTCGTGGCTCCTCAACCACTCCCCACACTATATAA
Protein sequenceShow/hide protein sequence
MNDVDNDQRIKVMDLEMKSLYFNSIWDLVNLLDGVVLLTLKEASSSFPNESLGEVELTLSQVSYVYKMHGILLSKELCPETPQDVEDMRYKPYAVGIVRIPPSHWPERDF
LFTGWTINRLFIRGALVLKEPERIAGQSCGGVPRFHFWSLAFKKAFLKNSESSDDENRGKLEITQKCDRIFGKANFKYDRISGKTEVVLSSSRVVLNETFAHLTDRFDPE
NDWVTYQHLFRGSSTTPHTI