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Lag0035633 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035633
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr3:26003211..26005582
RNA-Seq ExpressionLag0035633
SyntenyLag0035633
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2711776.1 hypothetical protein I3760_04G092800 [Carya illinoinensis]1.9e-0852.73Show/hide
Query:  MANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        M + L  +E +VTA MNE LL P+  +++E A+KQMHPSKAPGP+G   +F+QK+
Subjt:  MANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.9e-0853.45Show/hide
Query:  EDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        EDV    L  I+ KVT+ MNE L+A FT +++ +A+K+M+P+KAPG +G PA+FYQKF
Subjt:  EDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

XP_042950087.1 uncharacterized protein LOC122282202 [Carya illinoinensis]5.0e-0952.38Show/hide
Query:  ERRDEEDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        +R D EDV    L  +E +VTA MNE+LL P+  +++E A+KQMHPS+APGP+G P +F+QK+
Subjt:  ERRDEEDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

XP_042962672.1 uncharacterized protein LOC122296942 [Carya illinoinensis]3.9e-0953.97Show/hide
Query:  ERRDEEDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        +R D EDV    L  +E +VTA MNE LL P+  +++E A+KQMHPSKAPGP+G P +F+QK+
Subjt:  ERRDEEDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

XP_042974784.1 uncharacterized protein LOC122306423 [Carya illinoinensis]5.0e-0954.55Show/hide
Query:  MANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        M + L  +E +VTA MNE LL P+  +++E A+KQMHPSKAPGPNG   +F+QK+
Subjt:  MANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

TrEMBL top hitse value%identityAlignment
A0A2N9F6W2 Reverse transcriptase domain-containing protein3.5e-0859.62Show/hide
Query:  ALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        A+ DI K VT  MN  L+  F  D++E+AIKQM PSKAPGP+G P IFYQK+
Subjt:  ALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

A0A2N9J3U0 Reverse transcriptase domain-containing protein3.5e-0848.48Show/hide
Query:  HGEERRDEEDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        H   R      +A  +  + K VT  MN+ LLAPFT ++I  A+ QMHP+KAPGP+G  A+FYQKF
Subjt:  HGEERRDEEDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

A0A5B6W2F7 Reverse transcriptase2.7e-0856.86Show/hide
Query:  LQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        L+ IE+ + A  NE L  PFT D+++RA+K M P+KAPGP+GFPAIF+QK+
Subjt:  LQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

A0A803NHG3 Uncharacterized protein7.1e-0953.57Show/hide
Query:  VMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        V+   LQ ++ KV+  MNE LL PF  +++ +AIK+MHP+KAPG +G PA+FYQKF
Subjt:  VMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

A0A803P3X4 Uncharacterized protein1.6e-0848.28Show/hide
Query:  EDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF
        E +    L+ ++ KVT++MN+ L+   T +D+ RA+K M+P+KAPGP+G PA+FYQKF
Subjt:  EDVMANALQDIEKKVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCTACAGAGTCCGTCAATTTCACGAAACCTCGAGGGCGTCAATTTCACAACCCTCGACTTAGCTGTGGAGACTCGCCGCCGCGACCAGCTGAAGGAGAAGAAAC
CCACGCGTCAAAACACCTGCAGCCGAGCCGTACAAGTGCCGAGATCGCCGGAAGCTTGCCGTCGTTGCTGTCGCCAGTGAGGGGACTTGCCGGAAACTCAGTGAACCCAC
GGTTTGGAGAAGAAAATCGCAAAAAGAGGGGCTGGTCGGCTGCTACTCATGGAGAAGAAAGGAGGGATGAAGAAGATGTCATGGCTAATGCTTTACAAGACATAGAGAAG
AAGGTCACTGCGAACATGAATGAAAAGTTGTTAGCACCCTTTACATGGGATGATATTGAAAGAGCAATAAAGCAGATGCACCCATCAAAGGCACCTGGCCCAAATGGATT
TCCAGCAATCTTCTATCAAAAGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCTACAGAGTCCGTCAATTTCACGAAACCTCGAGGGCGTCAATTTCACAACCCTCGACTTAGCTGTGGAGACTCGCCGCCGCGACCAGCTGAAGGAGAAGAAAC
CCACGCGTCAAAACACCTGCAGCCGAGCCGTACAAGTGCCGAGATCGCCGGAAGCTTGCCGTCGTTGCTGTCGCCAGTGAGGGGACTTGCCGGAAACTCAGTGAACCCAC
GGTTTGGAGAAGAAAATCGCAAAAAGAGGGGCTGGTCGGCTGCTACTCATGGAGAAGAAAGGAGGGATGAAGAAGATGTCATGGCTAATGCTTTACAAGACATAGAGAAG
AAGGTCACTGCGAACATGAATGAAAAGTTGTTAGCACCCTTTACATGGGATGATATTGAAAGAGCAATAAAGCAGATGCACCCATCAAAGGCACCTGGCCCAAATGGATT
TCCAGCAATCTTCTATCAAAAGTTCTAG
Protein sequenceShow/hide protein sequence
MSPTESVNFTKPRGRQFHNPRLSCGDSPPRPAEGEETHASKHLQPSRTSAEIAGSLPSLLSPVRGLAGNSVNPRFGEENRKKRGWSAATHGEERRDEEDVMANALQDIEK
KVTANMNEKLLAPFTWDDIERAIKQMHPSKAPGPNGFPAIFYQKF