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Lag0035642 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035642
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor bHLH19-like isoform X1
Genome locationchr3:26200547..26201049
RNA-Seq ExpressionLag0035642
SyntenyLag0035642
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022963167.1 transcription factor bHLH19-like [Cucurbita moschata]4.9e-2457.14Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN
        MEISS +W+SEWEMEDAP FM+EF++NPF+FSFDE KFE+      +FYG     S             +K    GA  Q FAPKA+SSSSSSHIISFE 
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN

Query:  SNYCKSGKGFGVNGTIQPKIEMAYES
         N CK+GKG  V G+++PKIEMAYES
Subjt:  SNYCKSGKGFGVNGTIQPKIEMAYES

XP_023004094.1 transcription factor bHLH19-like isoform X1 [Cucurbita maxima]2.6e-2559.06Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQL--KAADGGAKCQIFAPKANSSSSSSHIISF
        MEISS +W+SEWEMEDAP FM+EF+++PF+FSFDE KFE+      +FYG    ++   +AVA+R  KQL  +    GA  Q FAPKA+SSSSSSHIISF
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQL--KAADGGAKCQIFAPKANSSSSSSHIISF

Query:  ENSNYCKSGKGFGVNGTIQPKIEMAYE
        E  N CK+GKG  V G+++PKIEMAYE
Subjt:  ENSNYCKSGKGFGVNGTIQPKIEMAYE

XP_023004095.1 transcription factor bHLH19-like isoform X2 [Cucurbita maxima]5.4e-2355.2Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN
        MEISS +W+SEWEMEDAP FM+EF+++PF+FSFDE KFE+      +FYG            +  P   ++    GA  Q FAPKA+SSSSSSHIISFE 
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN

Query:  SNYCKSGKGFGVNGTIQPKIEMAYE
         N CK+GKG  V G+++PKIEMAYE
Subjt:  SNYCKSGKGFGVNGTIQPKIEMAYE

XP_023518686.1 transcription factor bHLH19-like [Cucurbita pepo subsp. pepo]1.1e-2356.35Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN
        MEISS +W+SEWEMEDAP FM+EF++NPF+FSFDE KFE+      +FYG     S             +K    GA  Q FAPKA+SSSSSSHIISF+ 
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN

Query:  SNYCKSGKGFGVNGTIQPKIEMAYES
         N CK+GKG  V G+++PKIEMAYES
Subjt:  SNYCKSGKGFGVNGTIQPKIEMAYES

XP_038883438.1 transcription factor bHLH18-like [Benincasa hispida]2.4e-2353.96Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQ---TDWMALEFYGPAAQTSTSTTAVAQRPAKQLK-AADGGAKCQIFAP--KANSSSSSSH
        MEISSARW+SEWE+ED P FM+EF+++PFDFS DEFKFE+     W   +FY    ++    +AV +RP KQLK A DGG KCQIF    KA+SSSS+S 
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQ---TDWMALEFYGPAAQTSTSTTAVAQRPAKQLK-AADGGAKCQIFAP--KANSSSSSSH

Query:  IISFENSNYCKSGKGFGVNGTIQPKIEMAYESLEEGERF
        IISFEN +  K GK     G++  KIEM YES+   E +
Subjt:  IISFENSNYCKSGKGFGVNGTIQPKIEMAYESLEEGERF

TrEMBL top hitse value%identityAlignment
A0A6J1BY31 transcription factor bHLH19-like3.2e-2152.24Show/hide
Query:  ISSARWMSEWEMEDAPFMNEFELNPFDFSFDEFKFEQTDWMA--------LEFYGPAAQTSTSTTAVAQRPAKQLK-AADGGAKCQIFA--PKANSSSSS
        ISSARW+SEWEME+  F++E +++PF+FSFDEFKFEQ+D           +  YGP+A        V +RPAKQLK AA  GA CQIFA  PKA+SSSSS
Subjt:  ISSARWMSEWEMEDAPFMNEFELNPFDFSFDEFKFEQTDWMA--------LEFYGPAAQTSTSTTAVAQRPAKQLK-AADGGAKCQIFA--PKANSSSSS

Query:  SHIISFENSNYCKSGKGFGVNGTIQPKIEMAYES
        SHII F++SN   S         ++PK+EM +ES
Subjt:  SHIISFENSNYCKSGKGFGVNGTIQPKIEMAYES

A0A6J1HEG9 transcription factor bHLH19-like2.4e-2457.14Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN
        MEISS +W+SEWEMEDAP FM+EF++NPF+FSFDE KFE+      +FYG     S             +K    GA  Q FAPKA+SSSSSSHIISFE 
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN

Query:  SNYCKSGKGFGVNGTIQPKIEMAYES
         N CK+GKG  V G+++PKIEMAYES
Subjt:  SNYCKSGKGFGVNGTIQPKIEMAYES

A0A6J1KTM8 transcription factor bHLH19-like isoform X22.6e-2355.2Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN
        MEISS +W+SEWEMEDAP FM+EF+++PF+FSFDE KFE+      +FYG            +  P   ++    GA  Q FAPKA+SSSSSSHIISFE 
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFEN

Query:  SNYCKSGKGFGVNGTIQPKIEMAYE
         N CK+GKG  V G+++PKIEMAYE
Subjt:  SNYCKSGKGFGVNGTIQPKIEMAYE

A0A6J1KV88 transcription factor bHLH19-like isoform X11.3e-2559.06Show/hide
Query:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQL--KAADGGAKCQIFAPKANSSSSSSHIISF
        MEISS +W+SEWEMEDAP FM+EF+++PF+FSFDE KFE+      +FYG    ++   +AVA+R  KQL  +    GA  Q FAPKA+SSSSSSHIISF
Subjt:  MEISSARWMSEWEMEDAP-FMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQL--KAADGGAKCQIFAPKANSSSSSSHIISF

Query:  ENSNYCKSGKGFGVNGTIQPKIEMAYE
        E  N CK+GKG  V G+++PKIEMAYE
Subjt:  ENSNYCKSGKGFGVNGTIQPKIEMAYE

A0A7N2M0T7 Uncharacterized protein1.4e-0837.59Show/hide
Query:  MEISSARWMSEWEMEDAPFMNEFELNPFDFSFDEFKF---------EQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSS
        ME SSA+W+SE EMED  F++++E+N F +S D+  F            D      Y   A    +      RPAKQLK     +      P   +SSSS
Subjt:  MEISSARWMSEWEMEDAPFMNEFELNPFDFSFDEFKF---------EQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSS

Query:  SHIISFENSNY--CKSGKGFGVNGTIQPKIEMA
        SH+ISFENSN     S + +G++ T++PK E A
Subjt:  SHIISFENSNY--CKSGKGFGVNGTIQPKIEMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCTCATCAGCGAGATGGATGTCTGAATGGGAAATGGAAGATGCTCCTTTTATGAATGAATTTGAGCTAAACCCTTTTGATTTTTCGTTCGATGAGTTCAAATT
TGAACAGACCGACTGGATGGCACTGGAATTTTATGGACCTGCGGCTCAAACTTCAACGTCGACGACGGCGGTGGCGCAGAGGCCGGCGAAGCAGTTGAAGGCGGCGGACG
GCGGCGCCAAATGTCAAATATTTGCTCCGAAGGCTAATTCGTCATCGTCCTCATCTCATATAATTAGCTTCGAAAATTCGAATTATTGTAAATCTGGGAAAGGATTTGGT
GTGAACGGTACTATCCAGCCTAAGATTGAGATGGCTTATGAATCCTTGGAGGAGGGAGAGAGATTTGAAGAGCAGATGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCTCATCAGCGAGATGGATGTCTGAATGGGAAATGGAAGATGCTCCTTTTATGAATGAATTTGAGCTAAACCCTTTTGATTTTTCGTTCGATGAGTTCAAATT
TGAACAGACCGACTGGATGGCACTGGAATTTTATGGACCTGCGGCTCAAACTTCAACGTCGACGACGGCGGTGGCGCAGAGGCCGGCGAAGCAGTTGAAGGCGGCGGACG
GCGGCGCCAAATGTCAAATATTTGCTCCGAAGGCTAATTCGTCATCGTCCTCATCTCATATAATTAGCTTCGAAAATTCGAATTATTGTAAATCTGGGAAAGGATTTGGT
GTGAACGGTACTATCCAGCCTAAGATTGAGATGGCTTATGAATCCTTGGAGGAGGGAGAGAGATTTGAAGAGCAGATGTTTTAG
Protein sequenceShow/hide protein sequence
MEISSARWMSEWEMEDAPFMNEFELNPFDFSFDEFKFEQTDWMALEFYGPAAQTSTSTTAVAQRPAKQLKAADGGAKCQIFAPKANSSSSSSHIISFENSNYCKSGKGFG
VNGTIQPKIEMAYESLEEGERFEEQMF