; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035648 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035648
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:26376043..26378996
RNA-Seq ExpressionLag0035648
SyntenyLag0035648
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG68287.1 hypothetical protein EZV62_003222 [Acer yangbiense]4.4e-0931.25Show/hide
Query:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK--------------LRINKVPLNF
        L ++E  + P+ T +    +    +  VGK+LS++ ++ D F N++  IW +     IE +D N F   F  +S++              L I+ VPL  
Subjt:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK--------------LRINKVPLNF

Query:  LTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL
        +T  +A  LGS++  ++EV     GD IG  I++RV++DV KPL
Subjt:  LTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL

TXG70568.1 hypothetical protein EZV62_005503 [Acer yangbiense]4.8e-0833.33Show/hide
Query:  KVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSK-SEKLRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTK
        ++ S++L++ D F N++L IW +     IE ++ N F   F  + +  ++I+ VPL  +T  +   LGS++G V+E+  +G GD +G  I+I V+++V +
Subjt:  KVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSK-SEKLRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTK

Query:  PL
        PL
Subjt:  PL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]8.5e-1329.94Show/hide
Query:  TEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK-------------------------
        T +E   + +    P+     + +C V K+ +S+ + ++   +VM S+W VH STR EPL  N +VI F S SEK                         
Subjt:  TEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK-------------------------

Query:  -------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL
                     ++I+ +P   ++  MA+ LG+ LG VEE+ G+G   W G  I++RV +DV+KPL
Subjt:  -------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]7.5e-0928.8Show/hide
Query:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK------------------------
        LT+E+   I + +  PL     +   AVGK+ +S+ +  + F +VM S+W VH ST IE    N +VI F S +EK                        
Subjt:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK------------------------

Query:  --------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPLVVYSIGRGLDSHGGQE
                      ++I+ +P   +   MA  LG+ +G VEE+   G  +W G  I++RV +D++KP       RGL    G E
Subjt:  --------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPLVVYSIGRGLDSHGGQE

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.5e-0929.76Show/hide
Query:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEKLR----------------------
        L +EE   I +    P+     I +CAVGK+  S+ +  + F +VM  +W +H STRIE    N +VI F + +EK+R                      
Subjt:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEKLR----------------------

Query:  ----------------INKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL
                        I+ +    +T  MA  LG+ LG VEEV G    DW+   + +RV ++V KPL
Subjt:  ----------------INKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL

TrEMBL top hitse value%identityAlignment
A0A5C7IG42 Uncharacterized protein2.1e-0931.25Show/hide
Query:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK--------------LRINKVPLNF
        L ++E  + P+ T +    +    +  VGK+LS++ ++ D F N++  IW +     IE +D N F   F  +S++              L I+ VPL  
Subjt:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK--------------LRINKVPLNF

Query:  LTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL
        +T  +A  LGS++  ++EV     GD IG  I++RV++DV KPL
Subjt:  LTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL

A0A5C7IN84 CCHC-type domain-containing protein2.3e-0833.33Show/hide
Query:  KVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSK-SEKLRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTK
        ++ S++L++ D F N++L IW +     IE ++ N F   F  + +  ++I+ VPL  +T  +   LGS++G V+E+  +G GD +G  I+I V+++V +
Subjt:  KVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSK-SEKLRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTK

Query:  PL
        PL
Subjt:  PL

A0A6J1D765 uncharacterized protein LOC1110179024.1e-1329.94Show/hide
Query:  TEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK-------------------------
        T +E   + +    P+     + +C V K+ +S+ + ++   +VM S+W VH STR EPL  N +VI F S SEK                         
Subjt:  TEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK-------------------------

Query:  -------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL
                     ++I+ +P   ++  MA+ LG+ LG VEE+ G+G   W G  I++RV +DV+KPL
Subjt:  -------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL

A0A6J1DP89 uncharacterized protein LOC1110229323.6e-0928.8Show/hide
Query:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK------------------------
        LT+E+   I + +  PL     +   AVGK+ +S+ +  + F +VM S+W VH ST IE    N +VI F S +EK                        
Subjt:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEK------------------------

Query:  --------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPLVVYSIGRGLDSHGGQE
                      ++I+ +P   +   MA  LG+ +G VEE+   G  +W G  I++RV +D++KP       RGL    G E
Subjt:  --------------LRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPLVVYSIGRGLDSHGGQE

A0A6J1DVS4 uncharacterized protein LOC1110235557.3e-1029.76Show/hide
Query:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEKLR----------------------
        L +EE   I +    P+     I +CAVGK+  S+ +  + F +VM  +W +H STRIE    N +VI F + +EK+R                      
Subjt:  LTEEEVAVIPVPTNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEKLR----------------------

Query:  ----------------INKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL
                        I+ +    +T  MA  LG+ LG VEEV G    DW+   + +RV ++V KPL
Subjt:  ----------------INKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRVILDVTKPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGTTCGTCCTCACTAACACCAGAATCAAAGTTGGACTACTCCACTCTTGCAACTAAAGATCTAAATTTCAGCCACACTAACAATGACAAAGAAAAGGTAAGTAT
GTTAAAATGTTCGACATCCTTCGCATTTATAGCAGACTGTGAGGTCCTTGCCGCGTGCTTGCGCGATGTGGGATTTCTCAATTATCTCCACCTTATATTTCGCCTTTCGA
CTTCGAAGGATATGTTCATCCACTTCTTTGTCTATTATATTATTGAGTTGAAATGTTGTTCAGTGGTAGAAATGTTGACGGAGGAGGAAGTGGCGGTGATCCCTGTGCCA
ACGAATATTCCCTTGTTTCACGACTCAACCATCCATGTTTGCGCCGTTGGAAAGGTCCTCTCAAGCCAGTTACTGCATTCAGATGTCTTTTGCAATGTGATGTTGTCGAT
TTGGAATGTTCATCGCTCTACTCGGATTGAGCCTTTGGATGACAACAATTTTGTTATTCGATTTTATTCCAAAAGTGAGAAGCTTCGAATAAACAAGGTCCCATTGAATT
TTCTTACTCCTACTATGGCCCATGAACTTGGCAGTGTGCTTGGTACTGTTGAGGAAGTGTTTGGGGAAGGTTGTGGGGACTGGATAGGTTCAGTTATTCAAATTCGAGTT
ATTCTTGATGTGACTAAGCCCTTAGTCGTGTATTCCATTGGGAGGGGTCTTGATAGTCATGGAGGGCAAGAACATGGTGGGCTTGGTAAAGGCAAGAGGTTGGGTCATGG
TCAAATGAGTCTCTATAAGACGAGTGAGGATTTGAGCAGTGATTTAGTTCAAACTTCTGAGGTTACACATGTGGTGACTTCTTTTCCTTCTGCCACAACCATCCCTTCTT
TTGATAAAGGGAAGACAATGGTTGGGGAGGCCTCTTTGACACCTGTGAAAGAGGATGGCTCAAGTTCTGGTAAGAAAGATTGGAAAGGATGGGCCAGGGAGACTTTAAAA
GATGTTACAAATGTGATCTTTGTACCTTTATCTCCCAAGCACAATCGTCTTGCCCAGATGGATGCTCTTCCAACCAATGAGGGGGAAGCGAAACGATTGAAGCCGATGGA
AATGGATGATATGTTGAATGTGTTTGTTGATCATAATTTGGCGATGTTTGGTTGCCAGCCTTACCGAGAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGTTCGTCCTCACTAACACCAGAATCAAAGTTGGACTACTCCACTCTTGCAACTAAAGATCTAAATTTCAGCCACACTAACAATGACAAAGAAAAGGTAAGTAT
GTTAAAATGTTCGACATCCTTCGCATTTATAGCAGACTGTGAGGTCCTTGCCGCGTGCTTGCGCGATGTGGGATTTCTCAATTATCTCCACCTTATATTTCGCCTTTCGA
CTTCGAAGGATATGTTCATCCACTTCTTTGTCTATTATATTATTGAGTTGAAATGTTGTTCAGTGGTAGAAATGTTGACGGAGGAGGAAGTGGCGGTGATCCCTGTGCCA
ACGAATATTCCCTTGTTTCACGACTCAACCATCCATGTTTGCGCCGTTGGAAAGGTCCTCTCAAGCCAGTTACTGCATTCAGATGTCTTTTGCAATGTGATGTTGTCGAT
TTGGAATGTTCATCGCTCTACTCGGATTGAGCCTTTGGATGACAACAATTTTGTTATTCGATTTTATTCCAAAAGTGAGAAGCTTCGAATAAACAAGGTCCCATTGAATT
TTCTTACTCCTACTATGGCCCATGAACTTGGCAGTGTGCTTGGTACTGTTGAGGAAGTGTTTGGGGAAGGTTGTGGGGACTGGATAGGTTCAGTTATTCAAATTCGAGTT
ATTCTTGATGTGACTAAGCCCTTAGTCGTGTATTCCATTGGGAGGGGTCTTGATAGTCATGGAGGGCAAGAACATGGTGGGCTTGGTAAAGGCAAGAGGTTGGGTCATGG
TCAAATGAGTCTCTATAAGACGAGTGAGGATTTGAGCAGTGATTTAGTTCAAACTTCTGAGGTTACACATGTGGTGACTTCTTTTCCTTCTGCCACAACCATCCCTTCTT
TTGATAAAGGGAAGACAATGGTTGGGGAGGCCTCTTTGACACCTGTGAAAGAGGATGGCTCAAGTTCTGGTAAGAAAGATTGGAAAGGATGGGCCAGGGAGACTTTAAAA
GATGTTACAAATGTGATCTTTGTACCTTTATCTCCCAAGCACAATCGTCTTGCCCAGATGGATGCTCTTCCAACCAATGAGGGGGAAGCGAAACGATTGAAGCCGATGGA
AATGGATGATATGTTGAATGTGTTTGTTGATCATAATTTGGCGATGTTTGGTTGCCAGCCTTACCGAGAATTATGA
Protein sequenceShow/hide protein sequence
MLGSSSLTPESKLDYSTLATKDLNFSHTNNDKEKVSMLKCSTSFAFIADCEVLAACLRDVGFLNYLHLIFRLSTSKDMFIHFFVYYIIELKCCSVVEMLTEEEVAVIPVP
TNIPLFHDSTIHVCAVGKVLSSQLLHSDVFCNVMLSIWNVHRSTRIEPLDDNNFVIRFYSKSEKLRINKVPLNFLTPTMAHELGSVLGTVEEVFGEGCGDWIGSVIQIRV
ILDVTKPLVVYSIGRGLDSHGGQEHGGLGKGKRLGHGQMSLYKTSEDLSSDLVQTSEVTHVVTSFPSATTIPSFDKGKTMVGEASLTPVKEDGSSSGKKDWKGWARETLK
DVTNVIFVPLSPKHNRLAQMDALPTNEGEAKRLKPMEMDDMLNVFVDHNLAMFGCQPYREL