; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035660 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035660
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:26534840..26536248
RNA-Seq ExpressionLag0035660
SyntenyLag0035660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]6.9e-0642.65Show/hide
Query:  LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR
        + F + AFW+QI+ V L  +   +   LGS++  V+E+   G GD +G  IR+RV++DVTKPL R++R
Subjt:  LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR

TXG70623.1 hypothetical protein EZV62_005558 [Acer yangbiense]2.6e-0527.86Show/hide
Query:  MTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNL----ECRRSLFSPLGSNS-PLLDFSQCAFWVQINNVSLNFLIPIMAHEL
        +TL E+E   + +   +    +  + +   GK+LSS  VN       +  +    +    L  P G      + F++ AFWVQI+ V L  +   +   L
Subjt:  MTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNL----ECRRSLFSPLGSNS-PLLDFSQCAFWVQINNVSLNFLIPIMAHEL

Query:  GSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR
        G+++  V+E+   G GD +G  IR+RVI+D+ +P+  ++R
Subjt:  GSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-1129.19Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------
        MDE+T+ W +   T +E  T+ +    P+L    +++C + K+ +S               W V NS   +   +N+                       
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------

Query:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR
        +    L SP  +N PL ++F+ CAFW+QI+N+    +   MA+ LG+ L  VEE+ G+G   W G  IR+RV +DV+KPL R ++
Subjt:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.3e-0729.67Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLVN-SCLLQCDVVNL---------ECRR----------
        MDE+TE W N TLT+E+  TI + +  PL+    +Q   +GK+ +S               W V+ S  ++   +NL         E  R          
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLVN-SCLLQCDVVNL---------ECRR----------

Query:  ----SLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR
             L SP  ++ P  ++F+  A W+QI+ +    +I  MA  LG+ +  VEE+   G  +W G  IR+RV +D++KP  R
Subjt:  ----SLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]3.9e-0930.22Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------
        MD++T+ W N TL +EE  TI +    P+L    IQ+C +GK+  S               W + NS  ++   +N+                       
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------

Query:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR
        +    L     +N PL +D S CAFWVQI+ ++   +   MA  LG+ L  VEEV G    DW+   + +RV ++V KPL R
Subjt:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR

TrEMBL top hitse value%identityAlignment
A0A2N9F775 Reverse transcriptase domain-containing protein8.0e-0830.26Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNLECRRSLFSPLGSNSPLLD--------FSQCAFWVQINNV
        M+E+T +W +++LTE+E + I +          + +    G +L++W +   ++  + V     R+L + L S + L D        F   +FWVQI+++
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNLECRRSLFSPLGSNSPLLD--------FSQCAFWVQINNV

Query:  SLNFLIPIMAHELGSVLSTVEEV--FGEGCGDWIGSVIRIRVILDVTKPLCR
         +  + P     +GS L  +E+V   GEG   W  S +RIRVI+D+ +PLCR
Subjt:  SLNFLIPIMAHELGSVLSTVEEV--FGEGCGDWIGSVIRIRVILDVTKPLCR

A0A2N9HN71 Reverse transcriptase domain-containing protein2.3e-0728.57Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNLECRRSLFSP-LGSNSPLLD-----------FSQCAFWVQ
        M+E+T +W +++LTE+E + I +          T +    G +L++W +   ++  + V L   + L+ P  G  +  +D           F   +FWVQ
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNLECRRSLFSP-LGSNSPLLD-----------FSQCAFWVQ

Query:  INNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR
        I+++ +  + P     +GS L T+E V   G G   GS +R+RV +D+ +PLCR
Subjt:  INNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR

A0A6J1D765 uncharacterized protein LOC1110179027.0e-1229.19Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------
        MDE+T+ W +   T +E  T+ +    P+L    +++C + K+ +S               W V NS   +   +N+                       
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------

Query:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR
        +    L SP  +N PL ++F+ CAFW+QI+N+    +   MA+ LG+ L  VEE+ G+G   W G  IR+RV +DV+KPL R ++
Subjt:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVR

A0A6J1DP89 uncharacterized protein LOC1110229326.1e-0829.67Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLVN-SCLLQCDVVNL---------ECRR----------
        MDE+TE W N TLT+E+  TI + +  PL+    +Q   +GK+ +S               W V+ S  ++   +NL         E  R          
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLVN-SCLLQCDVVNL---------ECRR----------

Query:  ----SLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR
             L SP  ++ P  ++F+  A W+QI+ +    +I  MA  LG+ +  VEE+   G  +W G  IR+RV +D++KP  R
Subjt:  ----SLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR

A0A6J1DVS4 uncharacterized protein LOC1110235551.9e-0930.22Show/hide
Query:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------
        MD++T+ W N TL +EE  TI +    P+L    IQ+C +GK+  S               W + NS  ++   +N+                       
Subjt:  MDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSS---------------WLV-NSCLLQCDVVNL-----------------------

Query:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR
        +    L     +N PL +D S CAFWVQI+ ++   +   MA  LG+ L  VEEV G    DW+   + +RV ++V KPL R
Subjt:  ECRRSLFSPLGSNSPL-LDFSQCAFWVQINNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTTTCTGATCGCCCATTGACCCCGTCCAGTTACGGTCGTGTGGTTGACGGTTTCCTCATGGATGAACTCACTGAACAGTGGCTGAATATGACGTTGACAGAGGA
GGAAGCGGCGACGATCCCCATGCCAGCGAATATTCCCTTGCTTGACGACTCAACCATCCAAGTTTGCACCATTGGAAAGGTCCTTTCGAGCTGGTTAGTGAATTCATGTC
TTTTGCAATGTGATGTTGTCAATTTGGAATGTCGGCGCTCTTTGTTCTCGCCTCTAGGTTCGAATAGTCCTCTTCTTGATTTTTCTCAATGTGCATTTTGGGTCCAGATA
AACAATGTCTCATTGAATTTTCTTATTCCTATTATGGCCCATGAACTTGGCAGTGTGCTTAGTACTGTTGAGGAAGTGTTTGGGGAAGGTTGTGGGGACTGGATAGGTTC
AGTTATTCGAATTCGAGTTATTCTTGATGTGACTAAGCCCCTTTGTCGTGTAGTTCGTTGGCAGGGGAAGATGGCCAGGGTCTTGGTAGTCGTAGAGGGTGAGAACATGG
TGGGCTTGGTAGAGGTAAGAGGCAGGGTCGTGGTCGAATGGGTCTCTGCAAGACGGGTGAGGATTTTGGGCAGTGATTTAGTTCAAACTTCTATGGTTGCACTTGTTGTG
ATTTCTCTGCCTTCTACCACAACCATCCCCCCTCTTGATAAAGGGAAGACAATGGTTGGGGAGGTCTCTTCGACACTTGTGAAAGAGGATGGTTGTGGGGAGGTCTCTTC
GAGGTTTGGGGTCCCCTCGGGCTCTCTGACGCTTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTTTCTGATCGCCCATTGACCCCGTCCAGTTACGGTCGTGTGGTTGACGGTTTCCTCATGGATGAACTCACTGAACAGTGGCTGAATATGACGTTGACAGAGGA
GGAAGCGGCGACGATCCCCATGCCAGCGAATATTCCCTTGCTTGACGACTCAACCATCCAAGTTTGCACCATTGGAAAGGTCCTTTCGAGCTGGTTAGTGAATTCATGTC
TTTTGCAATGTGATGTTGTCAATTTGGAATGTCGGCGCTCTTTGTTCTCGCCTCTAGGTTCGAATAGTCCTCTTCTTGATTTTTCTCAATGTGCATTTTGGGTCCAGATA
AACAATGTCTCATTGAATTTTCTTATTCCTATTATGGCCCATGAACTTGGCAGTGTGCTTAGTACTGTTGAGGAAGTGTTTGGGGAAGGTTGTGGGGACTGGATAGGTTC
AGTTATTCGAATTCGAGTTATTCTTGATGTGACTAAGCCCCTTTGTCGTGTAGTTCGTTGGCAGGGGAAGATGGCCAGGGTCTTGGTAGTCGTAGAGGGTGAGAACATGG
TGGGCTTGGTAGAGGTAAGAGGCAGGGTCGTGGTCGAATGGGTCTCTGCAAGACGGGTGAGGATTTTGGGCAGTGATTTAGTTCAAACTTCTATGGTTGCACTTGTTGTG
ATTTCTCTGCCTTCTACCACAACCATCCCCCCTCTTGATAAAGGGAAGACAATGGTTGGGGAGGTCTCTTCGACACTTGTGAAAGAGGATGGTTGTGGGGAGGTCTCTTC
GAGGTTTGGGGTCCCCTCGGGCTCTCTGACGCTTGACTAA
Protein sequenceShow/hide protein sequence
MSLSDRPLTPSSYGRVVDGFLMDELTEQWLNMTLTEEEAATIPMPANIPLLDDSTIQVCTIGKVLSSWLVNSCLLQCDVVNLECRRSLFSPLGSNSPLLDFSQCAFWVQI
NNVSLNFLIPIMAHELGSVLSTVEEVFGEGCGDWIGSVIRIRVILDVTKPLCRVVRWQGKMARVLVVVEGENMVGLVEVRGRVVVEWVSARRVRILGSDLVQTSMVALVV
ISLPSTTTIPPLDKGKTMVGEVSSTLVKEDGCGEVSSRFGVPSGSLTLD