; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035666 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035666
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr3:26652874..26656827
RNA-Seq ExpressionLag0035666
SyntenyLag0035666
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR025558 - Domain of unknown function DUF4283
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW12714.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.9e-4733.69Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------
        GW GH F++KL+ +K +LK+WNK  FG  S K K + + LAN D  E+ G +S + + +R   K +L  +   EEI W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------

Query:  --------------------------------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKS
                                                                        LE+PFTE EI+KAI  +  +K PGPDGFT    +  
Subjt:  --------------------------------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKS

Query:  WNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDP
        W+ +K+D+  VF +F +SGIIN S N ++I LIPKK  ++ + +YRPISL T LYK+IA+VL+ RL+ VL  TI  +        +    +L+  +  D 
Subjt:  WNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDP

Query:  YGGNGFEDASLQL-------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
            G E    ++         +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RMLL AE+   ++G R
Subjt:  YGGNGFEDASLQL-------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

RVW16109.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.4e-4634.21Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------
        GW GH F+++L+ +K +LK+WNK  FG    K K + + LAN D  E+ G ++ D I +RV  K +L  +   EEI W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------

Query:  ------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLN
                                              LE+PFTE EI KAI  L  NK PGPDGFT    ++ W+ +K+D+  VF +F +SGIIN S N
Subjt:  ------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLN

Query:  ETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGN---------GFEDA--------
         ++I LIPKK  +K + ++RPISL T LYK+IA+VLS RL+ VL  TI  +        +    +L+  +  D    +          FE A        
Subjt:  ETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGN---------GFEDA--------

Query:  ----------------------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
                              S     +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RML+ AE+   ++G R
Subjt:  ----------------------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

RVW39477.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.1e-4633.6Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------
        GW GH F++KL+ +K +LK+WNK  FG  S K K + + LAN D  E+ G +S + + +R   K +L  +   EEI W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------

Query:  -------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYIC
                                         LE+PFTE EI+KAI  +  +K PGPDGFT    +  W+ +K+D+  VF +F +SGIIN S N ++I 
Subjt:  -------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYIC

Query:  LIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASL
        L+PKK  ++ + ++RPISL T LYK+IA+VL+ERL+  L  TI  +        +    +L+  +  D     G                    F D  L
Subjt:  LIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASL

Query:  QL-------------------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
        ++                     +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RMLL AE+   ++G R
Subjt:  QL-------------------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

RVW53010.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]7.1e-4634.86Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRF------------------
        GW GH F++KL+ +K +LK+WNK  FG  S K K + + LAN D  E+ G +S++ + +R   K +L      E + + ++                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRF------------------

Query:  -------ALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYK
                LE+PFTE EI+KAI  +  +K PGPDGFT    +  W+ +K+D+  VF +F +SGIIN S N ++I L+PKK  ++ + ++RPISL T LYK
Subjt:  -------ALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYK

Query:  VIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASLQL-------------------ITLI
        +IA+VL+ RL+ VL  TI  +        +    +L+  +  D     G                    F D  L++                     ++
Subjt:  VIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASLQL-------------------ITLI

Query:  INGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
        +NG  +G + ASRGLRQGDPLSPFLF +VAD L RMLL AE+   ++G R
Subjt:  INGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

RVX11537.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.2e-4633.61Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRFA-----------------
        GW GH F++KLK +K +LK+WN   FG    + KL+ + L+ ID  E+ G ++ D +  R   + +L  +   EE+ W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRFA-----------------

Query:  -----------------------LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKT
                               L+ PFTE E+ +A+  L   K PGPDGFT    ++ W+ +K+D+  VF +F  +G+IN S N T+I L+PKK  +  
Subjt:  -----------------------LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKT

Query:  VVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG---------FEDA-----------------------
        + +YRPISL T LYK+IA+VLS RL++VL  TIS S             +L+  +  D    +G         FE A                       
Subjt:  VVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG---------FEDA-----------------------

Query:  -------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKG
               S     +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RML  AE+ G  +G
Subjt:  -------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKG

TrEMBL top hitse value%identityAlignment
A0A438BP29 Transposon TX1 uncharacterized 149 kDa protein2.4e-4733.69Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------
        GW GH F++KL+ +K +LK+WNK  FG  S K K + + LAN D  E+ G +S + + +R   K +L  +   EEI W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------

Query:  --------------------------------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKS
                                                                        LE+PFTE EI+KAI  +  +K PGPDGFT    +  
Subjt:  --------------------------------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKS

Query:  WNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDP
        W+ +K+D+  VF +F +SGIIN S N ++I LIPKK  ++ + +YRPISL T LYK+IA+VL+ RL+ VL  TI  +        +    +L+  +  D 
Subjt:  WNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDP

Query:  YGGNGFEDASLQL-------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
            G E    ++         +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RMLL AE+   ++G R
Subjt:  YGGNGFEDASLQL-------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

A0A438BYN0 Transposon TX1 uncharacterized 149 kDa protein1.2e-4634.21Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------
        GW GH F+++L+ +K +LK+WNK  FG    K K + + LAN D  E+ G ++ D I +RV  K +L  +   EEI W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------

Query:  ------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLN
                                              LE+PFTE EI KAI  L  NK PGPDGFT    ++ W+ +K+D+  VF +F +SGIIN S N
Subjt:  ------------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLN

Query:  ETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGN---------GFEDA--------
         ++I LIPKK  +K + ++RPISL T LYK+IA+VLS RL+ VL  TI  +        +    +L+  +  D    +          FE A        
Subjt:  ETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGN---------GFEDA--------

Query:  ----------------------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
                              S     +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RML+ AE+   ++G R
Subjt:  ----------------------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

A0A438DVH3 Transposon TX1 uncharacterized 149 kDa protein5.3e-4733.6Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------
        GW GH F++KL+ +K +LK+WNK  FG  S K K + + LAN D  E+ G +S + + +R   K +L  +   EEI W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQR-------------------

Query:  -------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYIC
                                         LE+PFTE EI+KAI  +  +K PGPDGFT    +  W+ +K+D+  VF +F +SGIIN S N ++I 
Subjt:  -------------------------------FALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYIC

Query:  LIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASL
        L+PKK  ++ + ++RPISL T LYK+IA+VL+ERL+  L  TI  +        +    +L+  +  D     G                    F D  L
Subjt:  LIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASL

Query:  QL-------------------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
        ++                     +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RMLL AE+   ++G R
Subjt:  QL-------------------ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

A0A438EZ36 LINE-1 retrotransposable element ORF2 protein3.4e-4634.86Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRF------------------
        GW GH F++KL+ +K +LK+WNK  FG  S K K + + LAN D  E+ G +S++ + +R   K +L      E + + ++                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRF------------------

Query:  -------ALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYK
                LE+PFTE EI+KAI  +  +K PGPDGFT    +  W+ +K+D+  VF +F +SGIIN S N ++I L+PKK  ++ + ++RPISL T LYK
Subjt:  -------ALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYK

Query:  VIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASLQL-------------------ITLI
        +IA+VL+ RL+ VL  TI  +        +    +L+  +  D     G                    F D  L++                     ++
Subjt:  VIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG--------------------FEDASLQL-------------------ITLI

Query:  INGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR
        +NG  +G + ASRGLRQGDPLSPFLF +VAD L RMLL AE+   ++G R
Subjt:  INGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLR

A0A438JRF4 LINE-1 retrotransposable element ORF2 protein2.0e-4633.61Show/hide
Query:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRFA-----------------
        GW GH F++KLK +K +LK+WN   FG    + KL+ + L+ ID  E+ G ++ D +  R   + +L  +   EE+ W Q+                   
Subjt:  GWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILWHQRFA-----------------

Query:  -----------------------LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKT
                               L+ PFTE E+ +A+  L   K PGPDGFT    ++ W+ +K+D+  VF +F  +G+IN S N T+I L+PKK  +  
Subjt:  -----------------------LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKT

Query:  VVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG---------FEDA-----------------------
        + +YRPISL T LYK+IA+VLS RL++VL  TIS S             +L+  +  D    +G         FE A                       
Subjt:  VVEYRPISLTTCLYKVIARVLSERLKRVLPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNG---------FEDA-----------------------

Query:  -------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKG
               S     +++NG  +G + ASRGLRQGDPLSPFLF +VAD L RML  AE+ G  +G
Subjt:  -------SLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKG

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.7e-1327.87Show/hide
Query:  ALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVE-YRPISLTTCLYKVIARVL
        +L  P T +EI   I  L + K+PGPDGFTAEF ++    L   +  +F    K GI+  S  E  I LIPK     T  E +RPISL     K++ ++L
Subjt:  ALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVE-YRPISLTTCLYKVIARVL

Query:  SERLKRVLPATIS-------PSNQPLWGT-----------------------------NKFWMPLLLPLKASDPYGGNGFEDASLQLI------TLIING
        + R+++ +   I        P  Q  +                               +K   P +  LK  +  G +G     ++ I       +I+NG
Subjt:  SERLKRVLPATIS-------PSNQPLWGT-----------------------------NKFWMPLLLPLKASDPYGGNGFEDASLQLI------TLIING

Query:  KPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIK
        +         G RQG PLSP LF +V + L R +   ++I  I+
Subjt:  KPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIK

P08548 LINE-1 reverse transcriptase homolog1.1e-1227.16Show/hide
Query:  LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVE-YRPISLTTCLYKVIARVLS
        L  P + +EI   IQ+L   K+PGPDGFT+EF +     L   +  +F +  K GI+  +  E  I LIPK     T  E YRPISL     K++ ++L+
Subjt:  LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVE-YRPISLTTCLYKVIARVLS

Query:  ERLKRVLPATISPSNQPLWGTNKFWM-------------------PLLLPLKASDPYGG------------NGFEDASLQLI---------TLIINGKPR
         R+++ +   I          ++ W                     ++L + A   +               G E   L+LI          +I+NG   
Subjt:  ERLKRVLPATISPSNQPLWGTNKFWM-------------------PLLLPLKASDPYGG------------NGFEDASLQLI---------TLIINGKPR

Query:  GKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGL
               G RQG PLSP LF +V + L    ++  +  +IKG+
Subjt:  GKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGL

P11369 LINE-1 retrotransposable element ORF2 protein9.7e-1426.38Show/hide
Query:  LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFK----SGIINASLNETYICLIPKKIGTKTVVE-YRPISLTTCLYKVIA
        L +P +  EI   I  L + K+PGPDGF+AEF    + T K+D+  + +  F      G +  S  E  I LIPK     T +E +RPISL     K++ 
Subjt:  LETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFK----SGIINASLNETYICLIPKKIGTKTVVE-YRPISLTTCLYKVIA

Query:  RVLSERLKRVLPATISPSNQPLWGTNKFWM-------------------PLLLPLKASDPYG------------GNGFEDASLQLITLI---------IN
        ++L+ R++  + A I P         + W                     +++ L A   +              +G +   L +I  I         +N
Subjt:  RVLSERLKRVLPATISPSNQPLWGTNKFWM-------------------PLLLPLKASDPYG------------GNGFEDASLQLITLI---------IN

Query:  GKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDSLSIA
        G+    I    G RQG PLSP+LF +V + L R +   ++I  I+  ++ + I+
Subjt:  GKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDSLSIA

P14381 Transposon TX1 uncharacterized 149 kDa protein1.4e-1537.68Show/hide
Query:  DLISIAASEEILW--------HQRFALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIG
        D IS  A EE LW         ++  LETP T  E+ +A++ +  NK+PG DG T EF +  W+TL  D   V  + FK G +  S     + L+PKK  
Subjt:  DLISIAASEEILW--------HQRFALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIG

Query:  TKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISP
         + +  +RP+SL +  YK++A+ +S RLK VL   I P
Subjt:  TKTVVEYRPISLTTCLYKVIARVLSERLKRVLPATISP

P92555 Uncharacterized mitochondrial protein AtMg012501.0e-0748.21Show/hide
Query:  ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDS
        +  IING P+G +  SRGLRQGDPLSP+LFI+  + L  +   A++ G + G+R S
Subjt:  ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDS

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein6.5e-1340.45Show/hide
Query:  TEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVI
        ++ EI  A+  +  NK PGPD FTAEF  +SW  +KD       +FF++G +    N T I LIPK  G   +  +RP+S  T +YK+I
Subjt:  TEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)7.4e-0948.21Show/hide
Query:  ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDS
        +  IING P+G +  SRGLRQGDPLSP+LFI+  + L  +   A++ G + G+R S
Subjt:  ITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCCTCCTCCTTACAGATTTGTCAATGCCTGGCTGGCTCATGCCTCCCTCCCTCCTACTGTCGAGGCATGGTGGAAGTCAATCCCTTGACTGGATGGCCCGGACA
TGGATTTATTCAAAAGCTCAAAGGTCTTAAAAAGGAGCTGAAGCAATGGAACAAACAAGTTTTTGGTCACCAATCGGGAAAAATGAAACTTTTGGAGTCGGCACTAGCGA
ATATTGACAAGGCAGAAGAAATCGGTCCTATTTCAGAAGATGATATTCACAGAAGGGTCCAGATAAAGGCTGATTTGATTTCTATAGCGGCATCCGAGGAGATTTTATGG
CACCAAAGATTTGCCTTAGAAACCCCATTCACCGAGGCTGAAATCTTCAAGGCAATACAAGATTTGGGTTCGAATAAAACACCTGGCCCAGACGGATTCACAGCCGAATT
CATCAAAAAATCATGGAACACCCTCAAAGACGACATAAAGGGAGTGTTCAATGATTTTTTTAAGAGTGGAATCATCAATGCTAGCCTCAACGAGACCTACATCTGCCTCA
TCCCTAAAAAGATTGGTACTAAAACAGTGGTGGAATATAGACCTATTAGTTTGACTACCTGCCTTTACAAAGTTATTGCTCGGGTCCTCTCAGAACGCCTTAAAAGAGTC
CTTCCAGCCACTATATCTCCTTCCAATCAGCCTTTGTGGGGAACAAACAAATTTTGGATGCCTCTTTTATTGCCACTAAAGGCTTCGGACCCCTATGGAGGAAATGGATT
CGAGGATGCATCTCTTCAGTTAATTACTCTTATTATTAATGGCAAACCTAGAGGTAAAATCATTGCTTCTAGAGGTCTCAGACAGGGAGACCCCCTCTCTCCCTTCCTTT
TCATTATGGTAGCTGATTGCCTTGGTAGGATGTTATTATCGGCTGAACAAATTGGCTCCATTAAAGGCCTTCGGGACTCCCTCTCAATAGCAACCCGAGGAAAATCAGCT
TTTGGACCCCTGTTATTGAAAAGATTCAGCGAAGACTACACTCTTGGGGATCTCAGAACATCTCCAAAGGAGGCTACGATTGCTGAGTTATGGATTCCGATTAATGGCTC
TTGGAACTTACATTTGAGAAGGAACCTTATAGAAGAGGATATTCTTGAGTGGGCTTCTTTATCTCACAATCTCACCAATTTCTCCATAAATAATACTGAAGACTCTTGGT
TTTGGTGCCTTGGAAATTCTGGATTCTTCTCCACAGGAACTCTCACAAGACATTTGGCTTCCTCCTCACAGCACAACATAACACCTAGTTCTTCGCCTCTTCTGTGGTGC
ATGAAGCGCAAAGGATCAAATGACAAGGAACAGATATTTTTAGGGACTATCCCACTTCCCATTACTCGACGAGGGAAGTACCCTTATCCAAGCTATTCTAGGATCAATGA
AGAAGCTTACTGGGTTCGCAAGAATTGGGATATTGCCCTTGAGAATTTCTTTAAATCTTCCGTCTTGATTAACCCCTTCATGGATGATAAAGCTTTGATTCATGTAGCAG
ATAGTGGTTTGGATTTTTCTGCGAATGGCAAGTGGAAGAAATTTGGGAACCTTCATTTGAAATTGGAATATTGGTCCTCTGAGATCCATTCACAGTCGAAGATTATAAAG
AGTTACGGAGGCTGGCTTGCTATCAAAAATCTTCCTTTGAATTTATGGCATCGTGACTCCTTTGAAGCTATTGGAAGGAACCTTGGAGGGTTGGTTAGTATTTCTTCCAA
TACGCTTAATTTGTTAAATTGTTCTGAAGCCTACTGGTGGAGCCGTAGACTTGTTTTTAGAATAATAACAAATGATACCCCTTTATTGATAATCACTTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCCTCCTCCTTACAGATTTGTCAATGCCTGGCTGGCTCATGCCTCCCTCCCTCCTACTGTCGAGGCATGGTGGAAGTCAATCCCTTGACTGGATGGCCCGGACA
TGGATTTATTCAAAAGCTCAAAGGTCTTAAAAAGGAGCTGAAGCAATGGAACAAACAAGTTTTTGGTCACCAATCGGGAAAAATGAAACTTTTGGAGTCGGCACTAGCGA
ATATTGACAAGGCAGAAGAAATCGGTCCTATTTCAGAAGATGATATTCACAGAAGGGTCCAGATAAAGGCTGATTTGATTTCTATAGCGGCATCCGAGGAGATTTTATGG
CACCAAAGATTTGCCTTAGAAACCCCATTCACCGAGGCTGAAATCTTCAAGGCAATACAAGATTTGGGTTCGAATAAAACACCTGGCCCAGACGGATTCACAGCCGAATT
CATCAAAAAATCATGGAACACCCTCAAAGACGACATAAAGGGAGTGTTCAATGATTTTTTTAAGAGTGGAATCATCAATGCTAGCCTCAACGAGACCTACATCTGCCTCA
TCCCTAAAAAGATTGGTACTAAAACAGTGGTGGAATATAGACCTATTAGTTTGACTACCTGCCTTTACAAAGTTATTGCTCGGGTCCTCTCAGAACGCCTTAAAAGAGTC
CTTCCAGCCACTATATCTCCTTCCAATCAGCCTTTGTGGGGAACAAACAAATTTTGGATGCCTCTTTTATTGCCACTAAAGGCTTCGGACCCCTATGGAGGAAATGGATT
CGAGGATGCATCTCTTCAGTTAATTACTCTTATTATTAATGGCAAACCTAGAGGTAAAATCATTGCTTCTAGAGGTCTCAGACAGGGAGACCCCCTCTCTCCCTTCCTTT
TCATTATGGTAGCTGATTGCCTTGGTAGGATGTTATTATCGGCTGAACAAATTGGCTCCATTAAAGGCCTTCGGGACTCCCTCTCAATAGCAACCCGAGGAAAATCAGCT
TTTGGACCCCTGTTATTGAAAAGATTCAGCGAAGACTACACTCTTGGGGATCTCAGAACATCTCCAAAGGAGGCTACGATTGCTGAGTTATGGATTCCGATTAATGGCTC
TTGGAACTTACATTTGAGAAGGAACCTTATAGAAGAGGATATTCTTGAGTGGGCTTCTTTATCTCACAATCTCACCAATTTCTCCATAAATAATACTGAAGACTCTTGGT
TTTGGTGCCTTGGAAATTCTGGATTCTTCTCCACAGGAACTCTCACAAGACATTTGGCTTCCTCCTCACAGCACAACATAACACCTAGTTCTTCGCCTCTTCTGTGGTGC
ATGAAGCGCAAAGGATCAAATGACAAGGAACAGATATTTTTAGGGACTATCCCACTTCCCATTACTCGACGAGGGAAGTACCCTTATCCAAGCTATTCTAGGATCAATGA
AGAAGCTTACTGGGTTCGCAAGAATTGGGATATTGCCCTTGAGAATTTCTTTAAATCTTCCGTCTTGATTAACCCCTTCATGGATGATAAAGCTTTGATTCATGTAGCAG
ATAGTGGTTTGGATTTTTCTGCGAATGGCAAGTGGAAGAAATTTGGGAACCTTCATTTGAAATTGGAATATTGGTCCTCTGAGATCCATTCACAGTCGAAGATTATAAAG
AGTTACGGAGGCTGGCTTGCTATCAAAAATCTTCCTTTGAATTTATGGCATCGTGACTCCTTTGAAGCTATTGGAAGGAACCTTGGAGGGTTGGTTAGTATTTCTTCCAA
TACGCTTAATTTGTTAAATTGTTCTGAAGCCTACTGGTGGAGCCGTAGACTTGTTTTTAGAATAATAACAAATGATACCCCTTTATTGATAATCACTTGCCCTTAA
Protein sequenceShow/hide protein sequence
MGSSSLQICQCLAGSCLPPSYCRGMVEVNPLTGWPGHGFIQKLKGLKKELKQWNKQVFGHQSGKMKLLESALANIDKAEEIGPISEDDIHRRVQIKADLISIAASEEILW
HQRFALETPFTEAEIFKAIQDLGSNKTPGPDGFTAEFIKKSWNTLKDDIKGVFNDFFKSGIINASLNETYICLIPKKIGTKTVVEYRPISLTTCLYKVIARVLSERLKRV
LPATISPSNQPLWGTNKFWMPLLLPLKASDPYGGNGFEDASLQLITLIINGKPRGKIIASRGLRQGDPLSPFLFIMVADCLGRMLLSAEQIGSIKGLRDSLSIATRGKSA
FGPLLLKRFSEDYTLGDLRTSPKEATIAELWIPINGSWNLHLRRNLIEEDILEWASLSHNLTNFSINNTEDSWFWCLGNSGFFSTGTLTRHLASSSQHNITPSSSPLLWC
MKRKGSNDKEQIFLGTIPLPITRRGKYPYPSYSRINEEAYWVRKNWDIALENFFKSSVLINPFMDDKALIHVADSGLDFSANGKWKKFGNLHLKLEYWSSEIHSQSKIIK
SYGGWLAIKNLPLNLWHRDSFEAIGRNLGGLVSISSNTLNLLNCSEAYWWSRRLVFRIITNDTPLLIITCP