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Lag0035696 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035696
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:27501446..27502032
RNA-Seq ExpressionLag0035696
SyntenyLag0035696
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]3.5e-1135.61Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQ--RVKIVPDKD----------EERHFFKRTIDLSLHTPFTGP
        +PT+HDST+S +R+ ++Y ++KG  I VG++I  EI  C  +  GKLF   LIT+ C+   V ++ D+D          E     KRT   S  T  T  
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQ--RVKIVPDKD----------EERHFFKRTIDLSLHTPFTGP

Query:  SPSSEALGMVHHQLDRIRENLKTYWTYAKERD
         P  E L        ++ E L+T+W Y +ERD
Subjt:  SPSSEALGMVHHQLDRIRENLKTYWTYAKERD

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.8e-0737.89Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFT--GPSPSSE
        +PTTH  T+S DR++L++ ++ G  I VGR+I  EI AC  ++ G LF  SLIT+LC+  +     +EE+      ID       T  GP+ S++
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFT--GPSPSSE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.8e-1128.36Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDL-------------SLHTPFT-
        +PTTH  T+S DR++L++ ++ G  I VGR+I  EI AC  ++ G LF  SLIT+LC+  +     +EE+      ID              S   P + 
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDL-------------SLHTPFT-

Query:  --GPSPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE
            + S+   G +  QL  + + L                     + +W Y+KERD A+++   +   R  P FP FPQ +L   + + + E DK+   
Subjt:  --GPSPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE

Query:  K
        +
Subjt:  K

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]9.8e-1430.85Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTID--------------LSLHTPFT
        +PTTH  T+S DR++L+Y ++ G  I VGR+I  EI AC  +++G LF  SLITQLC+  +     +EE+      ID              L+     +
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTID--------------LSLHTPFT

Query:  GP--SPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE
         P  + SS A G +  QL  + + L                     + +W Y+KERD A+++   +   R  P FP FPQ LL   + + + E DK+   
Subjt:  GP--SPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE

Query:  K
        +
Subjt:  K

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.1e-1230.53Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFTGPSP----------
        +PTTH   +S DR++L++ ++ G  I VGR+I  EI AC  ++ G LF  SLIT+LC+    +   +EE+      ID       T   P          
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFTGPSP----------

Query:  ------SSEALGMVHHQLDRIRENL----------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEEK
              SS   G V  QL  + + L          + +W Y+KERD A+++   +   R  P FP FPQ +L   + + + E DK+   +
Subjt:  ------SSEALGMVHHQLDRIRENL----------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEEK

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.8e-1128.36Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDL-------------SLHTPFT-
        +PTTH  T+S DR++L++ ++ G  I VGR+I  EI AC  ++ G LF  SLIT+LC+  +     +EE+      ID              S   P + 
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDL-------------SLHTPFT-

Query:  --GPSPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE
            + S+   G +  QL  + + L                     + +W Y+KERD A+++   +   R  P FP FPQ +L   + + + E DK+   
Subjt:  --GPSPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE

Query:  K
        +
Subjt:  K

A0A2P5CEY2 Uncharacterized protein4.7e-1430.85Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTID--------------LSLHTPFT
        +PTTH  T+S DR++L+Y ++ G  I VGR+I  EI AC  +++G LF  SLITQLC+  +     +EE+      ID              L+     +
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTID--------------LSLHTPFT

Query:  GP--SPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE
         P  + SS A G +  QL  + + L                     + +W Y+KERD A+++   +   R  P FP FPQ LL   + + + E DK+   
Subjt:  GP--SPSSEALGMVHHQLDRIRENL---------------------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEE

Query:  K
        +
Subjt:  K

A0A2P5DXM3 Uncharacterized protein2.0e-1230.53Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFTGPSP----------
        +PTTH   +S DR++L++ ++ G  I VGR+I  EI AC  ++ G LF  SLIT+LC+    +   +EE+      ID       T   P          
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFTGPSP----------

Query:  ------SSEALGMVHHQLDRIRENL----------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEEK
              SS   G V  QL  + + L          + +W Y+KERD A+++   +   R  P FP FPQ +L   + + + E DK+   +
Subjt:  ------SSEALGMVHHQLDRIRENL----------KTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEEK

A0A6A3BU96 Uncharacterized protein1.5e-0725.41Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEE---------RHFFKRTIDLS-------LHTP
        MPT+H++T+S+ R++L++ ++    I VGRII  ++  C  K+A  L   +LIT LC++ K+  +  +E         R      + L        +H  
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEE---------RHFFKRTIDLS-------LHTP

Query:  FTGPSPSS---------EALGMVHHQLDRIRENLKTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKE
          G + S+         EA+     QL  +  +++ ++ Y K RD  +   +  I P     FP FP  +LP    ++  E + +
Subjt:  FTGPSPSS---------EALGMVHHQLDRIRENLKTYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKE

A0A7J6FZ22 Uncharacterized protein1.7e-1135.61Show/hide
Query:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQ--RVKIVPDKD----------EERHFFKRTIDLSLHTPFTGP
        +PT+HDST+S +R+ ++Y ++KG  I VG++I  EI  C  +  GKLF   LIT+ C+   V ++ D+D          E     KRT   S  T  T  
Subjt:  MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQ--RVKIVPDKD----------EERHFFKRTIDLSLHTPFTGP

Query:  SPSSEALGMVHHQLDRIRENLKTYWTYAKERD
         P  E L        ++ E L+T+W Y +ERD
Subjt:  SPSSEALGMVHHQLDRIRENLKTYWTYAKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCACGATAGCACAATTTCAGTGGATAGAGTGATGCTAATCTACTATCTTATGAAAGGGTTGGATATCAAAGTAGGGAGAATTATAAGGGATGAAATCTT
AGCCTGTGGATGGAAAAGAGCAGGCAAGCTTTTCTTGGGCTCACTCATCACCCAGCTCTGTCAGAGGGTGAAGATCGTGCCAGACAAGGACGAGGAGCGCCATTTCTTCA
AGCGAACCATTGACCTGTCCTTGCACACTCCTTTTACAGGGCCTTCACCATCATCAGAAGCCCTAGGCATGGTCCACCACCAGCTTGATCGAATTAGGGAGAACCTGAAG
ACTTACTGGACGTATGCCAAGGAGAGGGATGAAGCAATTAGAGAGTTTTATCTCTCTATCGCCCCAAGAATTGCTCCGGTCTTTCCAAATTTCCCACAATCGTTGCTGCC
CCAAGAAGAAGAAGATTCTGATGAAGAGGAAGATAAAGAGAATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCACGATAGCACAATTTCAGTGGATAGAGTGATGCTAATCTACTATCTTATGAAAGGGTTGGATATCAAAGTAGGGAGAATTATAAGGGATGAAATCTT
AGCCTGTGGATGGAAAAGAGCAGGCAAGCTTTTCTTGGGCTCACTCATCACCCAGCTCTGTCAGAGGGTGAAGATCGTGCCAGACAAGGACGAGGAGCGCCATTTCTTCA
AGCGAACCATTGACCTGTCCTTGCACACTCCTTTTACAGGGCCTTCACCATCATCAGAAGCCCTAGGCATGGTCCACCACCAGCTTGATCGAATTAGGGAGAACCTGAAG
ACTTACTGGACGTATGCCAAGGAGAGGGATGAAGCAATTAGAGAGTTTTATCTCTCTATCGCCCCAAGAATTGCTCCGGTCTTTCCAAATTTCCCACAATCGTTGCTGCC
CCAAGAAGAAGAAGATTCTGATGAAGAGGAAGATAAAGAGAATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATAG
Protein sequenceShow/hide protein sequence
MPTTHDSTISVDRVMLIYYLMKGLDIKVGRIIRDEILACGWKRAGKLFLGSLITQLCQRVKIVPDKDEERHFFKRTIDLSLHTPFTGPSPSSEALGMVHHQLDRIRENLK
TYWTYAKERDEAIREFYLSIAPRIAPVFPNFPQSLLPQEEEDSDEEEDKENEEKESSSDEE