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Lag0035699 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035699
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:27572157..27573410
RNA-Seq ExpressionLag0035699
SyntenyLag0035699
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031753.1 gag protease polyprotein [Cucumis melo var. makuwa]1.5e-1035.26Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQ-TSCLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   T C H+TVEE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQ-TSCLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

KAA0032811.1 uncharacterized protein E6C27_scaffold708G00650 [Cucumis melo var. makuwa]3.0e-1131.88Show/hide
Query:  MPSGKKESTFSTPDVTRPLVFQRLSVTMR----------RDKKEQSALSISHQLQY---EDAMKNEKVTKIDG--EICAAVPSRMKRKTFVTVDT-DGSS
        M   K++   ST ++ R   FQRL++T++          + K+  S + + H++++   E +   E   ++ G  EI + VPSRMKRKTFVT++T  GS 
Subjt:  MPSGKKESTFSTPDVTRPLVFQRLSVTMR----------RDKKEQSALSISHQLQY---EDAMKNEKVTKIDG--EICAAVPSRMKRKTFVTVDT-DGSS

Query:  KVKRRDVVITNPRGVQWSVRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTSCLHITVEEEIEVEMSEVDEEETPLSLE
        KVKR DV+                                                LTNP +EDS++ E + SC HIT+ EE+E+E  E D E+ P SLE
Subjt:  KVKRRDVVITNPRGVQWSVRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTSCLHITVEEEIEVEMSEVDEEETPLSLE

Query:  DGSEFTL
        DG + T+
Subjt:  DGSEFTL

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.3e-1034.21Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   + C H+T+EE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]4.3e-1034.21Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   + C H+T+EE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]4.3e-1034.21Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   + C H+T+EE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

TrEMBL top hitse value%identityAlignment
A0A5A7SND9 Gag protease polyprotein7.2e-1135.26Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQ-TSCLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   T C H+TVEE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQ-TSCLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

A0A5A7TZU9 Ribonuclease H2.1e-1034.21Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   + C H+T+EE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

A0A5D3BIH8 Uncharacterized protein2.1e-1034.21Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   + C H+T+EE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

A0A5D3D1E5 Ribonuclease H2.1e-1034.21Show/hide
Query:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS
        S KK  + S    TR   F+RLSV++ RD+K+ S +S+S+        K+  VT  D EI +A PSRMKRK FV+V+T+GS KVKR DVV T P      
Subjt:  SGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWS

Query:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL
                                                   E++  +DE   + C H+T+EE  + ++ E D E  PLSLEDG + T+
Subjt:  VRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTS-CLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTL

A0A5D3E3K0 Uncharacterized protein1.4e-1131.88Show/hide
Query:  MPSGKKESTFSTPDVTRPLVFQRLSVTMR----------RDKKEQSALSISHQLQY---EDAMKNEKVTKIDG--EICAAVPSRMKRKTFVTVDT-DGSS
        M   K++   ST ++ R   FQRL++T++          + K+  S + + H++++   E +   E   ++ G  EI + VPSRMKRKTFVT++T  GS 
Subjt:  MPSGKKESTFSTPDVTRPLVFQRLSVTMR----------RDKKEQSALSISHQLQY---EDAMKNEKVTKIDG--EICAAVPSRMKRKTFVTVDT-DGSS

Query:  KVKRRDVVITNPRGVQWSVRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTSCLHITVEEEIEVEMSEVDEEETPLSLE
        KVKR DV+                                                LTNP +EDS++ E + SC HIT+ EE+E+E  E D E+ P SLE
Subjt:  KVKRRDVVITNPRGVQWSVRVVNVGRSGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTSCLHITVEEEIEVEMSEVDEEETPLSLE

Query:  DGSEFTL
        DG + T+
Subjt:  DGSEFTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGTGGGAAAAAAGAGAGTACATTTTCAACTCCGGATGTGACTCGACCATTAGTTTTTCAGAGGTTAAGTGTTACCATGAGAAGAGACAAAAAAGAACAGTCTGC
TTTGTCGATTTCTCACCAACTTCAATATGAAGATGCGATGAAAAATGAAAAGGTCACGAAGATCGATGGAGAAATTTGTGCTGCAGTTCCTTCACGAATGAAAAGAAAAA
CCTTTGTTACTGTCGATACGGATGGTTCCTCGAAGGTAAAGCGACGTGATGTTGTCATCACCAATCCTAGGGGTGTACAGTGGTCAGTAAGGGTCGTCAATGTTGGTCGA
TCTGGTCGGTTTGAGCCTGCGTTGGGCTCACCGACCGATCGACGTCGGTTCGGTCGGCCAGACCGATTTATCGGAATATTTTTCTCACCCCTAACAAATCCTTCGGAGGA
AGATAGTGACAAGGACGAAAAACAAACCTCTTGTCTTCATATCACTGTTGAAGAAGAAATAGAGGTCGAAATGTCTGAAGTAGATGAGGAAGAAACACCTTTATCACTTG
AAGACGGCAGCGAATTCACACTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGTGGGAAAAAAGAGAGTACATTTTCAACTCCGGATGTGACTCGACCATTAGTTTTTCAGAGGTTAAGTGTTACCATGAGAAGAGACAAAAAAGAACAGTCTGC
TTTGTCGATTTCTCACCAACTTCAATATGAAGATGCGATGAAAAATGAAAAGGTCACGAAGATCGATGGAGAAATTTGTGCTGCAGTTCCTTCACGAATGAAAAGAAAAA
CCTTTGTTACTGTCGATACGGATGGTTCCTCGAAGGTAAAGCGACGTGATGTTGTCATCACCAATCCTAGGGGTGTACAGTGGTCAGTAAGGGTCGTCAATGTTGGTCGA
TCTGGTCGGTTTGAGCCTGCGTTGGGCTCACCGACCGATCGACGTCGGTTCGGTCGGCCAGACCGATTTATCGGAATATTTTTCTCACCCCTAACAAATCCTTCGGAGGA
AGATAGTGACAAGGACGAAAAACAAACCTCTTGTCTTCATATCACTGTTGAAGAAGAAATAGAGGTCGAAATGTCTGAAGTAGATGAGGAAGAAACACCTTTATCACTTG
AAGACGGCAGCGAATTCACACTTTTATAA
Protein sequenceShow/hide protein sequence
MPSGKKESTFSTPDVTRPLVFQRLSVTMRRDKKEQSALSISHQLQYEDAMKNEKVTKIDGEICAAVPSRMKRKTFVTVDTDGSSKVKRRDVVITNPRGVQWSVRVVNVGR
SGRFEPALGSPTDRRRFGRPDRFIGIFFSPLTNPSEEDSDKDEKQTSCLHITVEEEIEVEMSEVDEEETPLSLEDGSEFTLL