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Lag0035700 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035700
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr3:27577885..27578388
RNA-Seq ExpressionLag0035700
SyntenyLag0035700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.6e-3254.76Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +K + +SD+Y GP+TRSRS+GI I+      A+A  I K + ES K  +V+K+NPL+      S +     +P VMS+MMA V  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+NLLMK VDERDHEIA LK Q+Q RETAE SQTPV   +DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.6e-3254.76Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +K + +SD+Y GP+TRSRS+GI I+      A+A  I K + ES K  +V+K+NPL+      S +     +P VMS+MMA V  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+NLLMK VDERDHEIA LK Q+Q RETAE SQTPV   +DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.6e-3254.76Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +K + +SD+Y GP+TRSRS+GI I+      A+A  I K + ES K  +V+K+NPL+      S +     +P VMS+MMA V  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+NLLMK VDERDHEIA LK Q+Q RETAE SQTPV   +DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.6e-3254.76Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +K + +SD+Y GP+TRSRS+GI I+      A+A  I K + ES K  +V+K+NPL+      S +     +P VMS+MMA V  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+NLLMK VDERDHEIA LK Q+Q RETAE SQTPV   +DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.6e-3254.76Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +K + +SD+Y GP+TRSRS+GI I+      A+A  I K + ES K  +V+K+NPL+      S +     +P VMS+MMA V  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+NLLMK VDERDHEIA LK Q+Q RETAE SQTPV   +DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein1.8e-2949.4Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +  + +SD+Y GP+TRSRS+GI  ++D     VA RI K + ES K  +V+K+N L++++   S + K   +P V S+MMA +  +  M EME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+N LMKAV+ERDHEI   + Q++ RETAE SQTPV    DKGK ++ E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

A0A5A7UF60 Ty3-gypsy retrotransposon protein4.6e-3049.4Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  K  +    +SD+Y GP+TRSRS+GI I+E      V   I K + ES K  +V+K NPL++++   S   K   +P VMS+MMA +  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQPQYSAL-VASPSVQQL
        +K+N LMKAV+ERDHEI  L+ Q++ RETAE SQTPV    DKGK +V E+QPQ  ++ VAS S+QQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQPQYSAL-VASPSVQQL

A0A5A7VCU1 Ty3-gypsy retrotransposon protein5.6e-2848.21Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA ++ + +SD Y GP+TR+RS+GI  ++D     V   I K + ES K  +V+K+N L++++   S + K   +P VMS+MM  +  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+N LMK V+ERDHEI  L+ Q+Q RET E SQT V    DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

A0A5D3BDK1 Ty3-gypsy retrotransposon protein2.8e-2746.95Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +  + +SD+Y GP+TR+RS+GI I+E      +A  I K + ES K  +V+K+NPL++++   S + K   +P VMS++M  +  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPS
        RK+N LMK V+ERDHEI  L+ Q++ R+TAE +QTPV    DKGK  V E+QP Q S  VAS S
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPS

A0A5D3BY54 Ty3-gypsy retrotransposon protein3.2e-3150.6Show/hide
Query:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME
        MA  KA +  + +S++Y GP+TRSRS+GI  ++D     VA  I K + ES K  +V+K+NPL++++  +S + K   +P VMS+MMA +  +  MAEME
Subjt:  MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEME

Query:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL
        RK+N LMKAV+ERDHEI  L+ Q++ RETAE SQTP+    DKGK +V E+QP Q S  VAS SVQQL
Subjt:  RKLNLLMKAVDERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQP-QYSALVASPSVQQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAACGAAAGCACCCGCGAAGGTGACAACATCAAGTGACTCTTACAGAGGTCCTGTCACTCGTAGTCGTTCCCAAGGAATTGAGATTAAGGAGGATCACACTCC
TCTCGCTGTTGCAAGTAGGATCTCAAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGTAGTCAAAGACAACCCATTGTTCGAATCTGCCACTCCAACATCTGAACAGC
CAAAGGACACCCTAAATCCTCATGTGATGTCTATCATGATGGCTCATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTT
GATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTGCAAAATCGAGAAACTGCTGAATTTAGCCAGACCCCTGTTGCAGGAAAAAATGATAAGGGGAAGGTTAT
CGTCCATGAGGACCAGCCACAATACTCAGCGTTAGTTGCCTCTCCGTCTGTCCAACAACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAACGAAAGCACCCGCGAAGGTGACAACATCAAGTGACTCTTACAGAGGTCCTGTCACTCGTAGTCGTTCCCAAGGAATTGAGATTAAGGAGGATCACACTCC
TCTCGCTGTTGCAAGTAGGATCTCAAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGTAGTCAAAGACAACCCATTGTTCGAATCTGCCACTCCAACATCTGAACAGC
CAAAGGACACCCTAAATCCTCATGTGATGTCTATCATGATGGCTCATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTT
GATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTGCAAAATCGAGAAACTGCTGAATTTAGCCAGACCCCTGTTGCAGGAAAAAATGATAAGGGGAAGGTTAT
CGTCCATGAGGACCAGCCACAATACTCAGCGTTAGTTGCCTCTCCGTCTGTCCAACAACTGTAG
Protein sequenceShow/hide protein sequence
MAPTKAPAKVTTSSDSYRGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVVVKDNPLFESATPTSEQPKDTLNPHVMSIMMAHVDQDERMAEMERKLNLLMKAV
DERDHEIAYLKNQLQNRETAEFSQTPVAGKNDKGKVIVHEDQPQYSALVASPSVQQL