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Lag0035716 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035716
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:28290383..28291048
RNA-Seq ExpressionLag0035716
SyntenyLag0035716
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]1.3e-0532.46Show/hide
Query:  SYVRFFNNLARAKYAELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALY
        S+ +F ++ A+A++    K+   F+ GF        G  P ++   +T   W+ F   P SVNA VV EFYANI +     + V+G ++ ++PS I   +
Subjt:  SYVRFFNNLARAKYAELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALY

Query:  NLQDF--PHAGYNE
        +LQD    HA + E
Subjt:  NLQDF--PHAGYNE

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.3e-0630.83Show/hide
Query:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN
        V+F    A  +Y   +  R    ++GF        G LP +    IT   W+ FC+ PE     +V EFYAN+ +     V V+GV+V WS   INA++ 
Subjt:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA
        L D P   ++E +   +   L   +  V + GA
Subjt:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]4.7e-0833.33Show/hide
Query:  VRFFNNLARAKYAE-LLKRDFLFQRGFSGD------LPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNL
        V+  +  A  +Y E +  R    ++GF GD       P  +   IT   W+ FC+ PE + A +V EFYAN+   +   V V+GV+V  S   IN +Y L
Subjt:  VRFFNNLARAKYAE-LLKRDFLFQRGFSGD------LPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNL

Query:  QDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA
         D P   ++E V A +  +L   +  V I GA
Subjt:  QDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-0631.58Show/hide
Query:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN
        V+F    A  +Y   +  R    ++GF        G LP +    IT   W+ FC+ PE     +V EFYAN+ + E   V V+GV+V WS   INA++ 
Subjt:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA
        L D P   ++E +   + + L   +  V   GA
Subjt:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA

RYE21173.1 hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]8.8e-0732.2Show/hide
Query:  FFNNLARAKYAELLKRDFLFQRGFSGDLPHLLTADITNQ----GWESFCSKPE-SVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNLQD--
        F +  A  +Y  L++R  +F+RG        + + I N      W  FC+ PE   N  +++EFYAN+ + E   V V+GV+VD S   INAL    D  
Subjt:  FFNNLARAKYAELLKRDFLFQRGFSGDLPHLLTADITNQ----GWESFCSKPE-SVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNLQD--

Query:  FPHAGYNEMVVAPSNEQL
        F + GY + +  P+ +++
Subjt:  FPHAGYNEMVVAPSNEQL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.6e-0630.83Show/hide
Query:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN
        V+F    A  +Y   +  R    ++GF        G LP +    IT   W+ FC+ PE     +V EFYAN+ +     V V+GV+V WS   INA++ 
Subjt:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA
        L D P   ++E +   +   L   +  V + GA
Subjt:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA

A0A2P5B0K0 Uncharacterized protein2.3e-0833.33Show/hide
Query:  VRFFNNLARAKYAE-LLKRDFLFQRGFSGD------LPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNL
        V+  +  A  +Y E +  R    ++GF GD       P  +   IT   W+ FC+ PE + A +V EFYAN+   +   V V+GV+V  S   IN +Y L
Subjt:  VRFFNNLARAKYAE-LLKRDFLFQRGFSGD------LPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNL

Query:  QDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA
         D P   ++E V A +  +L   +  V I GA
Subjt:  QDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA

A0A2P5BCG4 Uncharacterized protein (Fragment)5.6e-0731.58Show/hide
Query:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN
        V+F    A  +Y   +  R    ++GF        G LP +    IT   W+ FC+ PE     +V EFYAN+ + E   V V+GV+V WS   INA++ 
Subjt:  VRFFNNLARAKYA-ELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA
        L D P   ++E +   + + L   +  V   GA
Subjt:  LQDFPHAGYNEMVVAPSNEQLGDAVREVGIEGA

A0A4Q3ENY7 Uncharacterized protein4.3e-0732.2Show/hide
Query:  FFNNLARAKYAELLKRDFLFQRGFSGDLPHLLTADITNQ----GWESFCSKPE-SVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNLQD--
        F +  A  +Y  L++R  +F+RG        + + I N      W  FC+ PE   N  +++EFYAN+ + E   V V+GV+VD S   INAL    D  
Subjt:  FFNNLARAKYAELLKRDFLFQRGFSGDLPHLLTADITNQ----GWESFCSKPE-SVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNLQD--

Query:  FPHAGYNEMVVAPSNEQL
        F + GY + +  P+ +++
Subjt:  FPHAGYNEMVVAPSNEQL

A0A6A2YMQ9 Uncharacterized protein6.1e-0632.46Show/hide
Query:  SYVRFFNNLARAKYAELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALY
        S+ +F ++ A+A++    K+   F+ GF        G  P ++   +T   W+ F   P SVNA VV EFYANI +     + V+G ++ ++PS I   +
Subjt:  SYVRFFNNLARAKYAELLKRDFLFQRGF-------SGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALY

Query:  NLQDF--PHAGYNE
        +LQD    HA + E
Subjt:  NLQDF--PHAGYNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTATCATGTCGAAAGTGCCAAAATGTCGCCGCGTGAAGCGAAAAGCCGGTCGCGCCAGGGTAGTCCGAACTGATACTCCCTTCCCACCAACCACTGACTCTGA
GAGAGAAAATGCAGAGAAAGAGGAACCGGAGAAAAAAGAGGTCGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGACTGAAGAAGAAAGGTTGCTCAAGCGAAGGGCAA
ACAAGGGCAAGAGTGTTGCTGCGGTATCGGAGGAGCCTGACAAGATAGGAGAGCCACAGTTGTCGTATGTCCGCTTCTTCAACAATCTTGCAAGAGCAAAATATGCTGAG
CTGCTGAAGAGAGACTTCCTGTTTCAGAGAGGATTCAGTGGTGATCTTCCGCATTTGCTGACGGCCGACATTACGAACCAAGGTTGGGAATCATTCTGTTCAAAGCCTGA
ATCTGTGAACGCGCAAGTAGTGCACGAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTTATTGTTCAAGGTGTAGAAGTTGACTGGAGTCCTAGTGTTATTA
ACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGTTGTAGCACCATCTAATGAGCAGCTGGGAGATGCTGTGCGGGAAGTTGGTATTGAAGGG
GCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTATCATGTCGAAAGTGCCAAAATGTCGCCGCGTGAAGCGAAAAGCCGGTCGCGCCAGGGTAGTCCGAACTGATACTCCCTTCCCACCAACCACTGACTCTGA
GAGAGAAAATGCAGAGAAAGAGGAACCGGAGAAAAAAGAGGTCGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGACTGAAGAAGAAAGGTTGCTCAAGCGAAGGGCAA
ACAAGGGCAAGAGTGTTGCTGCGGTATCGGAGGAGCCTGACAAGATAGGAGAGCCACAGTTGTCGTATGTCCGCTTCTTCAACAATCTTGCAAGAGCAAAATATGCTGAG
CTGCTGAAGAGAGACTTCCTGTTTCAGAGAGGATTCAGTGGTGATCTTCCGCATTTGCTGACGGCCGACATTACGAACCAAGGTTGGGAATCATTCTGTTCAAAGCCTGA
ATCTGTGAACGCGCAAGTAGTGCACGAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTTATTGTTCAAGGTGTAGAAGTTGACTGGAGTCCTAGTGTTATTA
ACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGTTGTAGCACCATCTAATGAGCAGCTGGGAGATGCTGTGCGGGAAGTTGGTATTGAAGGG
GCATAG
Protein sequenceShow/hide protein sequence
MEVIMSKVPKCRRVKRKAGRARVVRTDTPFPPTTDSERENAEKEEPEKKEVEDKAREEAEKKTEEERLLKRRANKGKSVAAVSEEPDKIGEPQLSYVRFFNNLARAKYAE
LLKRDFLFQRGFSGDLPHLLTADITNQGWESFCSKPESVNAQVVHEFYANIDEEEGFQVIVQGVEVDWSPSVINALYNLQDFPHAGYNEMVVAPSNEQLGDAVREVGIEG
A