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Lag0035718 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035718
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:28454247..28454674
RNA-Seq ExpressionLag0035718
SyntenyLag0035718
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG72479.1 hypothetical protein EZV62_001058 [Acer yangbiense]5.8e-1037.17Show/hide
Query:  MCADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLED
        +C    VAE + +L G +LA +LG     +E+D+L +V  +R +   +SEVG ++Q +L +    PVF   +VPR  N+V H LA+LA      FVW+ D
Subjt:  MCADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLED

Query:  WPSVVSVCLVLDS
         P  V   ++ DS
Subjt:  WPSVVSVCLVLDS

XP_021728488.1 uncharacterized protein LOC110695581 [Chenopodium quinoa]3.7e-0937.62Show/hide
Query:  VDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSV
        +DVAE M L   + + ++ GF  + +ETD+L+L H LR    D +  G +++ +LLL     V    +V REGN+V H LA+L+ + +   VWLE++PS 
Subjt:  VDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSV

Query:  V
        +
Subjt:  V

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]6.2e-1240.54Show/hide
Query:  ADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQAL-LLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDW
        +DVD  EG  + EG+ LA++ GF   Q+ETDSLR+ ++L  +  D SEVG L   + L L         ++  R GN  AH LAQLA +S    +W+E+W
Subjt:  ADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQAL-LLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDW

Query:  PSVVSVCLVLD
        P  +S  L +D
Subjt:  PSVVSVCLVLD

XP_024157591.1 uncharacterized protein LOC112165325 [Rosa chinensis]9.8e-1037.5Show/hide
Query:  EGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSVVSVC
        E + LL G++ AL +GF+ I++E D+L +++ L+   ED S  G L+  +  LV+      + +V REGN+VAH LA+ A   S  F+ LE  PS +  C
Subjt:  EGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSVVSVC

Query:  LVLD
        + +D
Subjt:  LVLD

XP_024177947.1 uncharacterized protein LOC112183863 [Rosa chinensis]2.9e-0937.5Show/hide
Query:  EGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSVVSVC
        E + LL G++ AL +GF+ I+VE D L +++ L+   ED S  G L+  +  L +      + +V REGN+VAH LA+ A   S  F+ LE  PS +  C
Subjt:  EGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSVVSVC

Query:  LVLD
        + +D
Subjt:  LVLD

TrEMBL top hitse value%identityAlignment
A0A5C7ITL2 RNase H domain-containing protein2.8e-1037.17Show/hide
Query:  MCADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLED
        +C    VAE + +L G +LA +LG     +E+D+L +V  +R +   +SEVG ++Q +L +    PVF   +VPR  N+V H LA+LA      FVW+ D
Subjt:  MCADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLED

Query:  WPSVVSVCLVLDS
         P  V   ++ DS
Subjt:  WPSVVSVCLVLDS

A0A6J1C467 uncharacterized protein LOC1110077752.4e-0936.94Show/hide
Query:  ADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQA-TYVPREGNRVAHELAQLAFSSSMDFVWLEDW
        +DV +AE +   EGV LA++ G    Q+ETDS ++ ++LR + ED SE+G L  ++  +V    +    ++V REGN  AH LA++   S    VW+E+W
Subjt:  ADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQA-TYVPREGNRVAHELAQLAFSSSMDFVWLEDW

Query:  PSVVSVCLVLD
         S +S  +  D
Subjt:  PSVVSVCLVLD

A0A6J1CIF1 uncharacterized protein LOC1110112372.4e-0934.26Show/hide
Query:  VDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSV
        VD+AE +V +EG++LA ++G + + +ETDS R+ ++     ED+SE G ++                +V REGN+ AH LA+ A       +W+EDWP  
Subjt:  VDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSV

Query:  VSVCLVLD
        +  CL ++
Subjt:  VSVCLVLD

A0A6J1DBJ7 uncharacterized protein LOC1110189733.0e-1240.54Show/hide
Query:  ADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQAL-LLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDW
        +DVD  EG  + EG+ LA++ GF   Q+ETDSLR+ ++L  +  D SEVG L   + L L         ++  R GN  AH LAQLA +S    +W+E+W
Subjt:  ADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQAL-LLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDW

Query:  PSVVSVCLVLD
        P  +S  L +D
Subjt:  PSVVSVCLVLD

A0A7J7GYW5 Uncharacterized protein6.9e-0939Show/hide
Query:  DVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPS
        D D AE     + V+LA  LGFS I +E DSLR+V  LR E E +SE G ++   +   +    F  ++V R+GN +AH LA++A   +   VW+ D P+
Subjt:  DVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCTGATGTTGATGTGGCTGAAGGCATGGTCTTGCTTGAAGGTGTTAAATTGGCGTTGCAGCTGGGCTTTTCTGGAATTCAAGTGGAGACGGATTCACTTCGCCT
AGTTCATATTCTTCGAGGGGAGATTGAAGATGTGTCGGAAGTAGGTTCTCTTATGCAGGCTCTCCTTCTTCTGGTTCGTGATGATCCTGTGTTTCAGGCGACTTATGTCC
CACGTGAGGGTAATCGAGTTGCCCATGAGTTGGCACAATTGGCTTTTTCTTCTTCTATGGATTTTGTTTGGCTTGAGGATTGGCCAAGTGTGGTTTCTGTTTGTCTGGTT
TTAGACTCTGTTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCTGATGTTGATGTGGCTGAAGGCATGGTCTTGCTTGAAGGTGTTAAATTGGCGTTGCAGCTGGGCTTTTCTGGAATTCAAGTGGAGACGGATTCACTTCGCCT
AGTTCATATTCTTCGAGGGGAGATTGAAGATGTGTCGGAAGTAGGTTCTCTTATGCAGGCTCTCCTTCTTCTGGTTCGTGATGATCCTGTGTTTCAGGCGACTTATGTCC
CACGTGAGGGTAATCGAGTTGCCCATGAGTTGGCACAATTGGCTTTTTCTTCTTCTATGGATTTTGTTTGGCTTGAGGATTGGCCAAGTGTGGTTTCTGTTTGTCTGGTT
TTAGACTCTGTTCGTTGA
Protein sequenceShow/hide protein sequence
MCADVDVAEGMVLLEGVKLALQLGFSGIQVETDSLRLVHILRGEIEDVSEVGSLMQALLLLVRDDPVFQATYVPREGNRVAHELAQLAFSSSMDFVWLEDWPSVVSVCLV
LDSVR