| GenBank top hits | e value | %identity | Alignment |
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| KAA0041273.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-35 | 42.8 | Show/hide |
Query: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKVV-------------------DGPV-HLVI-L
V PK TR GYF++ ++NK FVSTNA EE HI+ HKP+SK+ L++L+NE I +TRVV+E T+VV G V +L I
Subjt: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKVV-------------------DGPV-HLVI-L
Query: LSLKETSSSFPNENLGE-------------------AELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSN
+SL ET + + N+ + LEL CP+TPQ+VE++RH P YAVEIVS+YQSN
Subjt: LSLKETSSSFPNENLGE-------------------AELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSN
Query: PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
PRL W AVK IL+YLR T YMLVY +++ ILTRYTD+DFQT+++ RKSTS SVFTLN G +V
Subjt: PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| KAA0042022.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-32 | 37.67 | Show/hide |
Query: MVHSMLSYAQLSSSFWGHAVLPAMHTV----------------------------------------------------VGNPKETRSGYFFNSQENKEF
MV M+SYAQL SSFWG+AV +H + VG PK R G FF+ QEN+ F
Subjt: MVHSMLSYAQLSSSFWGHAVLPAMHTV----------------------------------------------------VGNPKETRSGYFFNSQENKEF
Query: VSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV------VDGPV------------HLVILLSLKETSSSF--------------
VSTNA F E H+++HKP+SK+ L++ T+E STR+VDEVG S++V V+ P+ + + L+ S F
Subjt: VSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV------VDGPV------------HLVILLSLKETSSSF--------------
Query: PNENLGEAELELCPETPQDVEDLRHKPYAVEIVSKYQSN--PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLN
P + E CP+TPQ+VED+R PYA + S + R D+ AV + +YLRRTR YMLVY +D I TRYTD+DFQT+KD RKSTS SVFTLN
Subjt: PNENLGEAELELCPETPQDVEDLRHKPYAVEIVSKYQSN--PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLN
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| KAA0055518.1 gag/pol protein [Cucumis melo var. makuwa] | 5.8e-35 | 46.35 | Show/hide |
Query: GNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV---------VDGPVHLVILLSLKETSSSFPNE
G PKETR G FF+ QEN+ F+ TNA F EE H +HKP+SK+ L++ T+E STRVVDEVG S++V V+ P LS K+ + +
Subjt: GNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV---------VDGPVHLVILLSLKETSSSFPNE
Query: NLGEA-ELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDW
+A +LE+ CP+TPQ+VED+R P YAV IVS+YQSN L W VK IL+YLRRTR YMLVY +D
Subjt: NLGEA-ELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDW
Query: ILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
IL YTD+DFQT+KD RKSTS VFTLN G +V
Subjt: ILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| TYK05842.1 gag/pol protein [Cucumis melo var. makuwa] | 4.4e-35 | 40.7 | Show/hide |
Query: MVHSMLSYAQLSSSFWGHAVLPAMHTV-------------------VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIV
MV SM+ +AQLS SFWG+A+ A++ + G PKE++ G ++ QENK FVSTNA F EE HI+NH+ +SK+ L ++
Subjt: MVHSMLSYAQLSSSFWGHAVLPAMHTV-------------------VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIV
Query: TSTRVVDEVGCSTKVVDGPVHLVILLSLKETSSSFPNENLGEAELELCPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLW
S + D+ STK E CP+TPQ+V+D + P Y+V IVS+YQSNPR D W
Subjt: TSTRVVDEVGCSTKVVDGPVHLVILLSLKETSSSFPNENLGEAELELCPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLW
Query: RAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
VK IL+YLRRT+ YMLVY ++D ILT YTD+DFQ++KD RKSTS SVFTLN G +V
Subjt: RAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| TYK19425.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-30 | 43.28 | Show/hide |
Query: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCS-------------TKVV---DGPVHLV-------
VG PKETR G FF+ QEN+ FVSTNA F EE H+++HKP+SK+ L NEA S RVVDEVG S T+VV DG L
Subjt: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCS-------------TKVV---DGPVHLV-------
Query: -----------------------------------ILLSL----------KETSSSFPNENLGEAELELCPETPQDVEDLRH-----KP---YAVEIVSK
ILLS+ + ++F N NL E+ PE +L + +P YAV IVS+
Subjt: -----------------------------------ILLSL----------KETSSSFPNENLGEAELELCPETPQDVEDLRH-----KP---YAVEIVSK
Query: YQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
YQSNP LD W AVK IL+YLRRTR YMLVY +D ILT YTD DFQT+KD RKSTS SVFTLN G +V
Subjt: YQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TF12 Gag/pol protein | 1.7e-32 | 37.67 | Show/hide |
Query: MVHSMLSYAQLSSSFWGHAVLPAMHTV----------------------------------------------------VGNPKETRSGYFFNSQENKEF
MV M+SYAQL SSFWG+AV +H + VG PK R G FF+ QEN+ F
Subjt: MVHSMLSYAQLSSSFWGHAVLPAMHTV----------------------------------------------------VGNPKETRSGYFFNSQENKEF
Query: VSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV------VDGPV------------HLVILLSLKETSSSF--------------
VSTNA F E H+++HKP+SK+ L++ T+E STR+VDEVG S++V V+ P+ + + L+ S F
Subjt: VSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV------VDGPV------------HLVILLSLKETSSSF--------------
Query: PNENLGEAELELCPETPQDVEDLRHKPYAVEIVSKYQSN--PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLN
P + E CP+TPQ+VED+R PYA + S + R D+ AV + +YLRRTR YMLVY +D I TRYTD+DFQT+KD RKSTS SVFTLN
Subjt: PNENLGEAELELCPETPQDVEDLRHKPYAVEIVSKYQSN--PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLN
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| A0A5A7UKE5 Gag/pol protein | 2.8e-35 | 46.35 | Show/hide |
Query: GNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV---------VDGPVHLVILLSLKETSSSFPNE
G PKETR G FF+ QEN+ F+ TNA F EE H +HKP+SK+ L++ T+E STRVVDEVG S++V V+ P LS K+ + +
Subjt: GNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKV---------VDGPVHLVILLSLKETSSSFPNE
Query: NLGEA-ELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDW
+A +LE+ CP+TPQ+VED+R P YAV IVS+YQSN L W VK IL+YLRRTR YMLVY +D
Subjt: NLGEA-ELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDW
Query: ILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
IL YTD+DFQT+KD RKSTS VFTLN G +V
Subjt: ILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| A0A5D3C3P6 Gag/pol protein | 2.1e-35 | 40.7 | Show/hide |
Query: MVHSMLSYAQLSSSFWGHAVLPAMHTV-------------------VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIV
MV SM+ +AQLS SFWG+A+ A++ + G PKE++ G ++ QENK FVSTNA F EE HI+NH+ +SK+ L ++
Subjt: MVHSMLSYAQLSSSFWGHAVLPAMHTV-------------------VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIV
Query: TSTRVVDEVGCSTKVVDGPVHLVILLSLKETSSSFPNENLGEAELELCPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLW
S + D+ STK E CP+TPQ+V+D + P Y+V IVS+YQSNPR D W
Subjt: TSTRVVDEVGCSTKVVDGPVHLVILLSLKETSSSFPNENLGEAELELCPETPQDVEDLRHKP--------------------YAVEIVSKYQSNPRLDLW
Query: RAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
VK IL+YLRRT+ YMLVY ++D ILT YTD+DFQ++KD RKSTS SVFTLN G +V
Subjt: RAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| A0A5D3D0T2 Gag/pol protein | 5.6e-36 | 42.8 | Show/hide |
Query: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKVV-------------------DGPV-HLVI-L
V PK TR GYF++ ++NK FVSTNA EE HI+ HKP+SK+ L++L+NE I +TRVV+E T+VV G V +L I
Subjt: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCSTKVV-------------------DGPV-HLVI-L
Query: LSLKETSSSFPNENLGE-------------------AELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSN
+SL ET + + N+ + LEL CP+TPQ+VE++RH P YAVEIVS+YQSN
Subjt: LSLKETSSSFPNENLGE-------------------AELEL------------CPETPQDVEDLRHKP--------------------YAVEIVSKYQSN
Query: PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
PRL W AVK IL+YLR T YMLVY +++ ILTRYTD+DFQT+++ RKSTS SVFTLN G +V
Subjt: PRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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| A0A5D3D7C0 Gag/pol protein | 9.3e-31 | 43.28 | Show/hide |
Query: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCS-------------TKVV---DGPVHLV-------
VG PKETR G FF+ QEN+ FVSTNA F EE H+++HKP+SK+ L NEA S RVVDEVG S T+VV DG L
Subjt: VGNPKETRSGYFFNSQENKEFVSTNAKFSEEVHIKNHKPQSKVGLSKLTNEAIVTSTRVVDEVGCS-------------TKVV---DGPVHLV-------
Query: -----------------------------------ILLSL----------KETSSSFPNENLGEAELELCPETPQDVEDLRH-----KP---YAVEIVSK
ILLS+ + ++F N NL E+ PE +L + +P YAV IVS+
Subjt: -----------------------------------ILLSL----------KETSSSFPNENLGEAELELCPETPQDVEDLRH-----KP---YAVEIVSK
Query: YQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
YQSNP LD W AVK IL+YLRRTR YMLVY +D ILT YTD DFQT+KD RKSTS SVFTLN G +V
Subjt: YQSNPRLDLWRAVKYILQYLRRTRVYMLVYDTEDWILTRYTDTDFQTNKDLRKSTSVSVFTLNRGDIV
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