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Lag0035762 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035762
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:29783531..29784286
RNA-Seq ExpressionLag0035762
SyntenyLag0035762
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.3e-1671.01Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSAIQ++ +  K  SE+GLMFVDA IN   AK TM+DSGATHNFISEQEARRL L IEKD+G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]4.1e-1568.12Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSAIQ++ +  K  SE+GLMFVDA IN   AK  M+DSGATHNFISEQEA RL L IEKD+G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

XP_022972955.1 uncharacterized protein LOC111471475 [Cucurbita maxima]2.7e-1468.12Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSA+QRK    K++ E+GLMFVDA IN  L+K T+IDSGATHNFI +QEARRLGL I KD G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]1.2e-1468.12Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSA+QRK    K++ E+GLMFVDA IN  L+K T+IDSGATHNFI++QEARRLGL I KD G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]1.2e-1468.12Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSA+QRK    K++ E+GLMFVDA IN  L+K T+IDSGATHNFI++QEARRLGL I KD G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

TrEMBL top hitse value%identityAlignment
A0A5A7SNU7 Reverse transcriptase6.4e-1464.18Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDS
        M ALKFLS IQ+KAS  KD  E+GL+FV+A++N    K T++  GATHNFIS+QEARRL LKIEKD+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDS

A0A5A7TSJ2 RT_RNaseH_2 domain-containing protein1.1e-1368.75Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIE
        M ALKFL AIQ+ AS  KD  E+GLMFVDA+IN   AK TM+D GATHNFIS++EA RL LKIE
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIE

A0A6J1D906 Reverse transcriptase6.2e-1771.01Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSAIQ++ +  K  SE+GLMFVDA IN   AK TM+DSGATHNFISEQEARRL L IEKD+G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

A0A6J1DK29 uncharacterized protein LOC1110218292.0e-1568.12Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSAIQ++ +  K  SE+GLMFVDA IN   AK  M+DSGATHNFISEQEA RL L IEKD+G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

A0A6J1IA31 uncharacterized protein LOC1114714751.3e-1468.12Show/hide
Query:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE
        M ALKFLSA+QRK    K++ E+GLMFVDA IN  L+K T+IDSGATHNFI +QEARRLGL I KD G+
Subjt:  MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTAAAGTTCTTATCTGCCATACAGAGAAAAGCCTCCAGGTCGAAAGACATGTCCGAGAGGGGATTGATGTTTGTAGATGCCATCATCAATGTTGGGCTTGC
TAAGGGTACCATGATTGATTCTGGCGCAACCCACAATTTCATTTCTGAACAAGAAGCCCGTAGGTTGGGATTAAAGATTGAGAAAGATTCTGGTGAGCATGTTTGTCCGG
GGCGAGTTGTGCCTATGGCCGTAAACCCAAACCATCGTCAACCACCATGTTTTAATGTTAGGACAGGTGCCGCACAATCGCCGTCCCGAATACGAATGTTTGTGATTGTG
ACACCAGCCGCCAGAGATATGAAGAAGAAGAAGAAGGAAGAGGATGAAGAAGAAGAGGATGAAGAAGAAGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTAAAGTTCTTATCTGCCATACAGAGAAAAGCCTCCAGGTCGAAAGACATGTCCGAGAGGGGATTGATGTTTGTAGATGCCATCATCAATGTTGGGCTTGC
TAAGGGTACCATGATTGATTCTGGCGCAACCCACAATTTCATTTCTGAACAAGAAGCCCGTAGGTTGGGATTAAAGATTGAGAAAGATTCTGGTGAGCATGTTTGTCCGG
GGCGAGTTGTGCCTATGGCCGTAAACCCAAACCATCGTCAACCACCATGTTTTAATGTTAGGACAGGTGCCGCACAATCGCCGTCCCGAATACGAATGTTTGTGATTGTG
ACACCAGCCGCCAGAGATATGAAGAAGAAGAAGAAGGAAGAGGATGAAGAAGAAGAGGATGAAGAAGAAGAAGAATAA
Protein sequenceShow/hide protein sequence
MAALKFLSAIQRKASRSKDMSERGLMFVDAIINVGLAKGTMIDSGATHNFISEQEARRLGLKIEKDSGEHVCPGRVVPMAVNPNHRQPPCFNVRTGAAQSPSRIRMFVIV
TPAARDMKKKKKEEDEEEEDEEEEE