; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035763 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035763
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:29784575..29786141
RNA-Seq ExpressionLag0035763
SyntenyLag0035763
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]4.4e-1636.04Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        +R+RFV + FH     KLQ L+QGSKSVE YY+EM  L+  ++L+ED E  M RF +GLN+EIA+ +    +++P  ++EEM+++AIK+EK LQ+RS RY
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTF-------------MERVSLPTRYEHVDKVESRKEKLATVVPMHDNDILPSRSLDSKESHDCDPTTTVVLLTGEAYINSSGVEKED
             S++S+T+              E      ++E  +  +  KEKL   V   D      + +    S DC    T+++  GE        EKED
Subjt:  IKSKLSYNSNTF-------------MERVSLPTRYEHVDKVESRKEKLATVVPMHDNDILPSRSLDSKESHDCDPTTTVVLLTGEAYINSSGVEKED

XP_022159097.1 uncharacterized protein LOC111025539 [Momordica charantia]1.5e-1627.42Show/hide
Query:  MRKRFVHKSF-----HKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MR+RF+   F      KLQ L+QG+KSVE+YY++M  L+E +++DE++E TM RF +GLN E+A     R +++  ED+EE+V+ ++K+EK +Q+R  RY
Subjt:  MRKRFVHKSF-----HKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH---VDKVESRKEKLATVVPMHDNDILPSRSLDSKESH-------DCDPTTTVVLLTGEAYINSSGVEKEDGSMLET
           K   NS +  ++    T  +     +K + + E  +   P  D     SR L   + H       +C    T++L  GE   ++S V++E       
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH---VDKVESRKEKLATVVPMHDNDILPSRSLDSKESH-------DCDPTTTVVLLTGEAYINSSGVEKEDGSMLET

Query:  RILCDDIVNIL-DHKVTCDPTLVSFLPR-----EVKLDVCELQPSFPSFSFEFLQVVKALIMKQNSK----IGSFDGCKLYVNWK-HHHSFQKRWNPERI
            D+ +N L   +   D T +S + R      ++ D  E Q      +   +Q +   ++  +      + S    +L ++ K H   ++ +W  +  
Subjt:  RILCDDIVNIL-DHKVTCDPTLVSFLPR-----EVKLDVCELQPSFPSFSFEFLQVVKALIMKQNSK----IGSFDGCKLYVNWK-HHHSFQKRWNPERI

Query:  EPLTSHDYKV----------------------ALQGRPSTKNPKVTLFSSHD-----FKTALQCNDLDSRTNPLKGGEDDMNR
        E   +   K+                       L GRP   + +V     HD     +      +D DSRTNP KGGEDDMN+
Subjt:  EPLTSHDYKV----------------------ALQGRPSTKNPKVTLFSSHD-----FKTALQCNDLDSRTNPLKGGEDDMNR

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]2.8e-1546.77Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MRKRFV + FH     KLQ LKQG KSVE YY+EM  L++++ LDED EA M  F +GLN EIA    E+ +++P  ++EE++++ IK+E+ +Q+RS RY
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH
          SK   NS +  +R S    Y+H
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH

XP_022973897.1 uncharacterized protein LOC111472489, partial [Cucurbita maxima]1.3e-1547.58Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MRKRFV + FH     KLQ LKQG KSVE YY+EM  L++ + LDED EA M RF +GLN EIA    ++ +++P  ++EE++++AIK+E+ +Q+RS RY
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH
          SK   NS +  +R S    Y H
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.1e-1445.97Show/hide
Query:  MRKRFVHKSF-----HKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MRKRFV + F      KLQ LKQG KSVE YY+EM  L++ ++LDED EA M RF +GLN EIA    ++ +++P  ++EE++++AIK+E+ +Q+RS RY
Subjt:  MRKRFVHKSF-----HKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH
          SK   NS +  ++ S    Y+H
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH

TrEMBL top hitse value%identityAlignment
A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241156.8e-1542.22Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        +R+RFV + FH     KLQ L+QGSKSVE YY+EM  L+  ++L+ED E  M RF +GLN+EIA+ +    +++P  ++EEM+++AIK+EK LQ+RS  Y
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTF-MERVSLPTRYEHVDKVESRKEK
             S++S+T+  +  S  ++  + +  E  KEK
Subjt:  IKSKLSYNSNTF-MERVSLPTRYEHVDKVESRKEK

A0A6J1DX46 LOW QUALITY PROTEIN: uncharacterized protein LOC1110252682.1e-1636.04Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        +R+RFV + FH     KLQ L+QGSKSVE YY+EM  L+  ++L+ED E  M RF +GLN+EIA+ +    +++P  ++EEM+++AIK+EK LQ+RS RY
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTF-------------MERVSLPTRYEHVDKVESRKEKLATVVPMHDNDILPSRSLDSKESHDCDPTTTVVLLTGEAYINSSGVEKED
             S++S+T+              E      ++E  +  +  KEKL   V   D      + +    S DC    T+++  GE        EKED
Subjt:  IKSKLSYNSNTF-------------MERVSLPTRYEHVDKVESRKEKLATVVPMHDNDILPSRSLDSKESHDCDPTTTVVLLTGEAYINSSGVEKED

A0A6J1DYV9 uncharacterized protein LOC1110255397.2e-1727.42Show/hide
Query:  MRKRFVHKSF-----HKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MR+RF+   F      KLQ L+QG+KSVE+YY++M  L+E +++DE++E TM RF +GLN E+A     R +++  ED+EE+V+ ++K+EK +Q+R  RY
Subjt:  MRKRFVHKSF-----HKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH---VDKVESRKEKLATVVPMHDNDILPSRSLDSKESH-------DCDPTTTVVLLTGEAYINSSGVEKEDGSMLET
           K   NS +  ++    T  +     +K + + E  +   P  D     SR L   + H       +C    T++L  GE   ++S V++E       
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH---VDKVESRKEKLATVVPMHDNDILPSRSLDSKESH-------DCDPTTTVVLLTGEAYINSSGVEKEDGSMLET

Query:  RILCDDIVNIL-DHKVTCDPTLVSFLPR-----EVKLDVCELQPSFPSFSFEFLQVVKALIMKQNSK----IGSFDGCKLYVNWK-HHHSFQKRWNPERI
            D+ +N L   +   D T +S + R      ++ D  E Q      +   +Q +   ++  +      + S    +L ++ K H   ++ +W  +  
Subjt:  RILCDDIVNIL-DHKVTCDPTLVSFLPR-----EVKLDVCELQPSFPSFSFEFLQVVKALIMKQNSK----IGSFDGCKLYVNWK-HHHSFQKRWNPERI

Query:  EPLTSHDYKV----------------------ALQGRPSTKNPKVTLFSSHD-----FKTALQCNDLDSRTNPLKGGEDDMNR
        E   +   K+                       L GRP   + +V     HD     +      +D DSRTNP KGGEDDMN+
Subjt:  EPLTSHDYKV----------------------ALQGRPSTKNPKVTLFSSHD-----FKTALQCNDLDSRTNPLKGGEDDMNR

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699481.4e-1546.77Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MRKRFV + FH     KLQ LKQG KSVE YY+EM  L++++ LDED EA M  F +GLN EIA    E+ +++P  ++EE++++ IK+E+ +Q+RS RY
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH
          SK   NS +  +R S    Y+H
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH

A0A6J1I8S0 uncharacterized protein LOC1114724896.1e-1647.58Show/hide
Query:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY
        MRKRFV + FH     KLQ LKQG KSVE YY+EM  L++ + LDED EA M RF +GLN EIA    ++ +++P  ++EE++++AIK+E+ +Q+RS RY
Subjt:  MRKRFVHKSFH-----KLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRY

Query:  IKSKLSYNSNTFMERVSLPTRYEH
          SK   NS +  +R S    Y H
Subjt:  IKSKLSYNSNTFMERVSLPTRYEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCGTTTTGTTCACAAGTCATTCCACAAATTGCAAACCTTGAAACAAGGGAGCAAAAGTGTAGAAAAATACTATGAAGAGATGCTCCTATTACTTGAGGAGAT
CAATTTGGATGAGGATAAGGAAGCTACCATGGACCGATTCTACCATGGACTTAATGAGGAGATTGCTGAGATGATTGTTGAACGAGAAGAAATTCGACCTTGTGAGGATT
TAGAGGAGATGGTGTATGTTGCCATCAAGGTAGAAAAGATGCTCCAAAAAAGATCTCTAAGGTACATTAAATCTAAGCTTAGCTACAATTCCAATACATTCATGGAAAGA
GTTAGTTTACCTACTAGATATGAGCATGTTGATAAGGTAGAAAGTAGAAAAGAGAAGCTTGCTACTGTTGTACCTATGCATGATAATGATATTTTGCCTAGTAGGTCATT
AGATAGCAAGGAATCACATGATTGTGATCCTACTACTACTGTTGTACTACTTACTGGAGAAGCATATATTAATAGTAGTGGAGTAGAGAAAGAAGATGGTAGTATGCTTG
AAACTAGGATACTTTGTGATGACATTGTTAATATATTAGATCACAAAGTAACATGTGATCCTACTCTTGTATCATTCCTTCCAAGAGAAGTAAAACTTGATGTGTGTGAG
CTTCAACCAAGTTTTCCTAGTTTTTCTTTTGAGTTTTTACAGGTTGTTAAAGCACTGATTATGAAGCAAAACTCAAAGATTGGTTCTTTCGATGGTTGCAAGTTATATGT
GAATTGGAAGCACCATCATTCTTTCCAAAAGAGATGGAATCCAGAAAGAATCGAGCCTTTGACATCTCATGACTACAAGGTTGCTTTACAAGGGAGACCATCCACGAAAA
ACCCAAAAGTCACCTTGTTTTCTTCTCATGACTTTAAAACTGCTTTACAATGCAATGATTTGGATTCGAGGACGAATCCTTTAAAAGGAGGAGAGGATGATATGAACCGC
CAAAGACACAGTTGCAAGCATGAACATTCATGTAGGCCTGATCAACTTGCTTGTGGAGTGTTCAAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGCGTTTTGTTCACAAGTCATTCCACAAATTGCAAACCTTGAAACAAGGGAGCAAAAGTGTAGAAAAATACTATGAAGAGATGCTCCTATTACTTGAGGAGAT
CAATTTGGATGAGGATAAGGAAGCTACCATGGACCGATTCTACCATGGACTTAATGAGGAGATTGCTGAGATGATTGTTGAACGAGAAGAAATTCGACCTTGTGAGGATT
TAGAGGAGATGGTGTATGTTGCCATCAAGGTAGAAAAGATGCTCCAAAAAAGATCTCTAAGGTACATTAAATCTAAGCTTAGCTACAATTCCAATACATTCATGGAAAGA
GTTAGTTTACCTACTAGATATGAGCATGTTGATAAGGTAGAAAGTAGAAAAGAGAAGCTTGCTACTGTTGTACCTATGCATGATAATGATATTTTGCCTAGTAGGTCATT
AGATAGCAAGGAATCACATGATTGTGATCCTACTACTACTGTTGTACTACTTACTGGAGAAGCATATATTAATAGTAGTGGAGTAGAGAAAGAAGATGGTAGTATGCTTG
AAACTAGGATACTTTGTGATGACATTGTTAATATATTAGATCACAAAGTAACATGTGATCCTACTCTTGTATCATTCCTTCCAAGAGAAGTAAAACTTGATGTGTGTGAG
CTTCAACCAAGTTTTCCTAGTTTTTCTTTTGAGTTTTTACAGGTTGTTAAAGCACTGATTATGAAGCAAAACTCAAAGATTGGTTCTTTCGATGGTTGCAAGTTATATGT
GAATTGGAAGCACCATCATTCTTTCCAAAAGAGATGGAATCCAGAAAGAATCGAGCCTTTGACATCTCATGACTACAAGGTTGCTTTACAAGGGAGACCATCCACGAAAA
ACCCAAAAGTCACCTTGTTTTCTTCTCATGACTTTAAAACTGCTTTACAATGCAATGATTTGGATTCGAGGACGAATCCTTTAAAAGGAGGAGAGGATGATATGAACCGC
CAAAGACACAGTTGCAAGCATGAACATTCATGTAGGCCTGATCAACTTGCTTGTGGAGTGTTCAAACCTTGA
Protein sequenceShow/hide protein sequence
MRKRFVHKSFHKLQTLKQGSKSVEKYYEEMLLLLEEINLDEDKEATMDRFYHGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRYIKSKLSYNSNTFMER
VSLPTRYEHVDKVESRKEKLATVVPMHDNDILPSRSLDSKESHDCDPTTTVVLLTGEAYINSSGVEKEDGSMLETRILCDDIVNILDHKVTCDPTLVSFLPREVKLDVCE
LQPSFPSFSFEFLQVVKALIMKQNSKIGSFDGCKLYVNWKHHHSFQKRWNPERIEPLTSHDYKVALQGRPSTKNPKVTLFSSHDFKTALQCNDLDSRTNPLKGGEDDMNR
QRHSCKHEHSCRPDQLACGVFKP