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Lag0035764 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035764
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:29791893..29792276
RNA-Seq ExpressionLag0035764
SyntenyLag0035764
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054437.1 uncharacterized protein E6C27_scaffold24G001940 [Cucumis melo var. makuwa]4.5e-2451.56Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MS T Q GK   ++LVE+EEQ+LYL EVPDS+RY ESRL+EISEK    DA+   + GLL+QEL  R +TL++   + S+ E G++S+SFV  M ERV+E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        L++SQ T+L + N+M EDF  T++ +R+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

KAA0065910.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]2.7e-2455.38Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKAT--KPSSTERGESSTSFVDKMSERV
        MS+    GK+  +RLVEIEEQ+LYL EVPDS+RY ESRLDEISEK+   DAV  RI GL +QEL  R ETLE+     +  + ERGESS+ F   M ERV
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKAT--KPSSTERGESSTSFVDKMSERV

Query:  DELNTSQTTMLWLFNEMTEDFRVTIETLRS
         EL++SQ  +L + N M+EDFRVT++ +R+
Subjt:  DELNTSQTTMLWLFNEMTEDFRVTIETLRS

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.3e-3466.41Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MS TKQL K+HV+RLVEIEEQLLYLREVPD +R  E+R+DE SEK GE DAVNARI GL +Q++A+R ETLESKAT+P S ERG+SST+   ++  R+ E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        LN S + M+ LFNEMTEDF+VTI+TLR+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]1.2e-3567.19Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MSATKQL K+HV+RLVEIEEQLLYLREVPDS+R  E+R+DE SEK GE DAVNAR+ GL +Q++A+R ET ESKAT+P S ERG+SST+   ++  R+ E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        LN S +TM+ LFNEMTEDF+VTI+TLR+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]1.4e-2854.69Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MS TKQLGK+H++RLVEIEE+LL+LRE+PD++RY ESRLDEIS K    D VNARI GL ++EL +R ETLE K  +  + ERGESS+S +  M ERV+E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        ++ S+ T++ + +E+T+DF+ T++ +R+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

TrEMBL top hitse value%identityAlignment
A0A5A7UIN3 Uncharacterized protein2.2e-2451.56Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MS T Q GK   ++LVE+EEQ+LYL EVPDS+RY ESRL+EISEK    DA+   + GLL+QEL  R +TL++   + S+ E G++S+SFV  M ERV+E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        L++SQ T+L + N+M EDF  T++ +R+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

A0A5A7VFC8 Senescence-specific cysteine protease sag391.3e-2455.38Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKAT--KPSSTERGESSTSFVDKMSERV
        MS+    GK+  +RLVEIEEQ+LYL EVPDS+RY ESRLDEISEK+   DAV  RI GL +QEL  R ETLE+     +  + ERGESS+ F   M ERV
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKAT--KPSSTERGESSTSFVDKMSERV

Query:  DELNTSQTTMLWLFNEMTEDFRVTIETLRS
         EL++SQ  +L + N M+EDFRVT++ +R+
Subjt:  DELNTSQTTMLWLFNEMTEDFRVTIETLRS

A0A6J1D906 Reverse transcriptase6.2e-3566.41Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MS TKQL K+HV+RLVEIEEQLLYLREVPD +R  E+R+DE SEK GE DAVNARI GL +Q++A+R ETLESKAT+P S ERG+SST+   ++  R+ E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        LN S + M+ LFNEMTEDF+VTI+TLR+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

A0A6J1DK29 uncharacterized protein LOC1110218295.6e-3667.19Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MSATKQL K+HV+RLVEIEEQLLYLREVPDS+R  E+R+DE SEK GE DAVNAR+ GL +Q++A+R ET ESKAT+P S ERG+SST+   ++  R+ E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        LN S +TM+ LFNEMTEDF+VTI+TLR+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

A0A6J1DLQ6 uncharacterized protein LOC1110223206.6e-2954.69Show/hide
Query:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE
        MS TKQLGK+H++RLVEIEE+LL+LRE+PD++RY ESRLDEIS K    D VNARI GL ++EL +R ETLE K  +  + ERGESS+S +  M ERV+E
Subjt:  MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIR-ETLESKATKPSSTERGESSTSFVDKMSERVDE

Query:  LNTSQTTMLWLFNEMTEDFRVTIETLRS
        ++ S+ T++ + +E+T+DF+ T++ +R+
Subjt:  LNTSQTTMLWLFNEMTEDFRVTIETLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGACCAAACAATTGGGCAAGACCCACGTTGAGCGACTTGTTGAGATAGAGGAACAGTTGCTATATTTGAGGGAAGTACCTGACTCGGTACGATATTTCGAAAG
TCGACTTGATGAGATCTCTGAAAAGATGGGTGAGACAGATGCAGTGAATGCCCGAATTGGTGGGCTACTTGTACAAGAGTTGGCAATAAGGGAGACCCTGGAGAGCAAAG
CTACAAAGCCTAGTAGCACTGAACGTGGGGAGAGCTCCACGAGTTTCGTCGACAAGATGAGTGAACGTGTCGACGAGTTGAATACATCCCAAACAACCATGTTGTGGTTG
TTCAACGAGATGACGGAAGACTTTAGAGTCACCATTGAAACCTTGAGAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGACCAAACAATTGGGCAAGACCCACGTTGAGCGACTTGTTGAGATAGAGGAACAGTTGCTATATTTGAGGGAAGTACCTGACTCGGTACGATATTTCGAAAG
TCGACTTGATGAGATCTCTGAAAAGATGGGTGAGACAGATGCAGTGAATGCCCGAATTGGTGGGCTACTTGTACAAGAGTTGGCAATAAGGGAGACCCTGGAGAGCAAAG
CTACAAAGCCTAGTAGCACTGAACGTGGGGAGAGCTCCACGAGTTTCGTCGACAAGATGAGTGAACGTGTCGACGAGTTGAATACATCCCAAACAACCATGTTGTGGTTG
TTCAACGAGATGACGGAAGACTTTAGAGTCACCATTGAAACCTTGAGAAGTTAG
Protein sequenceShow/hide protein sequence
MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYFESRLDEISEKMGETDAVNARIGGLLVQELAIRETLESKATKPSSTERGESSTSFVDKMSERVDELNTSQTTMLWL
FNEMTEDFRVTIETLRS