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Lag0035766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr3:29812847..29813218
RNA-Seq ExpressionLag0035766
SyntenyLag0035766
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-2759.66Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N++ K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]2.5e-2759.66Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N + K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.3e-2757.98Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +E+NQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N++ K+H+ +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.6e-2758.82Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q KR+M + + K F E N++ K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]3.3e-2760.5Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N++ K+HS +PSR+KRK SI INT+GSL VKP L
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein9.2e-2859.66Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N++ K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
A0A5A7V6H5 Ty3-gypsy retrotransposon protein3.5e-2758.82Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   KEENQC   T TR SAF+RLS+S SKK RP+TS FDRLK+T+ Q +R+M +L+ K F E N++ K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNPT+EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
A0A5D3BBF9 Gag protease polyprotein1.2e-2759.66Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N + K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
A0A5D3D209 Retrotransposon gag protein2.7e-2758.82Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q KR+M + + K F E N++ K+HS +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
A0A5D3D5Q0 Gag protease polyprotein1.6e-2760.5Show/hide
Query:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL
        +SM   +EENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M +L+ K F E N++ K+HS +PSR+KRK SI INT+GSL VKP L
Subjt:  MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNL

Query:  IILTNPTSEGSNPDHDEDK
        II TNP +EG     DE+K
Subjt:  IILTNPTSEGSNPDHDEDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGGTCGCGACAAAAGAAGAGAATCAATGTTCGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTTTCCACATCGAAGAAAAGTCGACCTTC
AACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAACGAAAAGAAACTTCATA
GCAGCATCCCATCACGTTTGAAGAGGAAGTTCTCTATTCTCATAAATACAGAAGGTTCCTTGAACGTGAAGCCAAATCTCATTATCCTGACCAATCCTACAAGCGAAGGA
TCTAATCCAGACCATGATGAAGATAAATACTCCTTATCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGGTCGCGACAAAAGAAGAGAATCAATGTTCGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTTTCCACATCGAAGAAAAGTCGACCTTC
AACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAACGAAAAGAAACTTCATA
GCAGCATCCCATCACGTTTGAAGAGGAAGTTCTCTATTCTCATAAATACAGAAGGTTCCTTGAACGTGAAGCCAAATCTCATTATCCTGACCAATCCTACAAGCGAAGGA
TCTAATCCAGACCATGATGAAGATAAATACTCCTTATCGTAA
Protein sequenceShow/hide protein sequence
MSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNNEKKLHSSIPSRLKRKFSILINTEGSLNVKPNLIILTNPTSEG
SNPDHDEDKYSLS