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Lag0035769 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035769
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr3:29846335..29848672
RNA-Seq ExpressionLag0035769
SyntenyLag0035769
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]4.6e-3037.61Show/hide
Query:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------
        Y+KP  RK KKASR +ST NP+G  I+  +WS RE   F ELGV                             LR EVF+VASLMA              
Subjt:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------

Query:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSWWLAK----NGNYLEEG
                       G  +  FPMHYV+ WL++YF THY +P +VRGP M  FSGEGG+ YF ++EAR  IH G  +  H +     K    +G Y E+ 
Subjt:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSWWLAK----NGNYLEEG

Query:  REKLVASVISLPPKPKFPKKVGNDNRGKRIHMFE
        R  LV+S I  P +P+  K  G++  GK I + E
Subjt:  REKLVASVISLPPKPKFPKKVGNDNRGKRIHMFE

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]2.0e-2528.57Show/hide
Query:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------
        Y+KP  RK KKASR +ST NP+G  I+  +WS RE   F ELG+                             LR EVF+VASLM               
Subjt:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------

Query:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------
                       G  +  FPMHYV+ WL++YF THY +P +VRGP M  FSGEGG+ YF  +EA   IH G                          
Subjt:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------

Query:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK
                                                          K+V    + WW  K+G Y E+ R  LV+S I  P +P+ PK  G++  GK
Subjt:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK

Query:  RIHMFE------PDEFRSRDND
         I + E       DE    ++D
Subjt:  RIHMFE------PDEFRSRDND

KAA0062705.1 uncharacterized protein E6C27_scaffold382G00250 [Cucumis melo var. makuwa]2.3e-3737.68Show/hide
Query:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV----------------------------SLRSEVFKVASLMAE-------
        ++  +KY KPP RK KK SRPRSTHNPNG PIK  DWSE EL  F +LGV                            SLR EVFKVASLMAE       
Subjt:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV----------------------------SLRSEVFKVASLMAE-------

Query:  ---------------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVH------------------------
                             GHS ACFP+HYV+ WL  YFNTHY  P  +RGP MVEFSGEGGAKY+ + EAR +                        
Subjt:  ---------------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVH------------------------

Query:  -----------IHKGKYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKV--GNDNRGKRIHMFEPDE
                    H   ++  H  +WWLA +G+YL+EG + L+        K K  KK+    D+  K+I   + +E
Subjt:  -----------IHKGKYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKV--GNDNRGKRIHMFEPDE

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.0e-2528.53Show/hide
Query:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMA--------------
        Y+KP  RK K ASR +ST NP+G  I+  +WS RE   F ELG+                             LR  VF+ ASLM               
Subjt:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMA--------------

Query:  --------------EGHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------
                       G  +  FPMHYV+ WL++YF THY +P +VRGP M  FSGEGG+ YF ++EAR  IH G                          
Subjt:  --------------EGHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------

Query:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK
                                                          K+V    + WW  K+G Y E+ R  LV+S I  P +P+ PK  G++  GK
Subjt:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK

Query:  RIHMFE---PDEFRSRDNDHYNNFGL
         I + E   P+       DH N  GL
Subjt:  RIHMFE---PDEFRSRDNDHYNNFGL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.5e-3647.31Show/hide
Query:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV----------------------------SLRSEVFKVASLMAE-------
        ++  +KY KPP RK KK SRPRSTHNP+G+PI+  DWS+ EL+ F +L V                            SLR EVFKVASLMAE       
Subjt:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV----------------------------SLRSEVFKVASLMAE-------

Query:  ---------------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCH
                             G+S ACFP+HYV+ WL+ YFNTHY  P  +RGP MVEFSGEGGAKY+ + EAR HIHKGKYV  H
Subjt:  ---------------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCH

TrEMBL top hitse value%identityAlignment
A0A2G9H879 Uncharacterized protein2.8e-2537.63Show/hide
Query:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV-----------------------------SLRSEVFKVASLMAEGHS---
        SKK++KY +PP RK KK +RP+STHNP+G       W+  E   F +LG+                             S+R   FK+AS+MA G     
Subjt:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV-----------------------------SLRSEVFKVASLMAEGHS---

Query:  -----------EACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSWWLAKNGN--YLEEGREK
                      FP+H++YAWL+YYF THY+VP+ +RGP M +FSGEGG +YFD  +AR  IHKG Y   H +   + K  N  ++++G+ K
Subjt:  -----------EACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSWWLAKNGN--YLEEGREK

A0A5A7U349 PMD domain-containing protein2.2e-3037.61Show/hide
Query:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------
        Y+KP  RK KKASR +ST NP+G  I+  +WS RE   F ELGV                             LR EVF+VASLMA              
Subjt:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------

Query:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSWWLAK----NGNYLEEG
                       G  +  FPMHYV+ WL++YF THY +P +VRGP M  FSGEGG+ YF ++EAR  IH G  +  H +     K    +G Y E+ 
Subjt:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSWWLAK----NGNYLEEG

Query:  REKLVASVISLPPKPKFPKKVGNDNRGKRIHMFE
        R  LV+S I  P +P+  K  G++  GK I + E
Subjt:  REKLVASVISLPPKPKFPKKVGNDNRGKRIHMFE

A0A5A7UVI5 PMD domain-containing protein9.7e-2628.57Show/hide
Query:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------
        Y+KP  RK KKASR +ST NP+G  I+  +WS RE   F ELG+                             LR EVF+VASLM               
Subjt:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMAE-------------

Query:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------
                       G  +  FPMHYV+ WL++YF THY +P +VRGP M  FSGEGG+ YF  +EA   IH G                          
Subjt:  ---------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------

Query:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK
                                                          K+V    + WW  K+G Y E+ R  LV+S I  P +P+ PK  G++  GK
Subjt:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK

Query:  RIHMFE------PDEFRSRDND
         I + E       DE    ++D
Subjt:  RIHMFE------PDEFRSRDND

A0A5A7VHW8 PMD domain-containing protein9.7e-2628.53Show/hide
Query:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMA--------------
        Y+KP  RK K ASR +ST NP+G  I+  +WS RE   F ELG+                             LR  VF+ ASLM               
Subjt:  YEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGVS----------------------------LRSEVFKVASLMA--------------

Query:  --------------EGHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------
                       G  +  FPMHYV+ WL++YF THY +P +VRGP M  FSGEGG+ YF ++EAR  IH G                          
Subjt:  --------------EGHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKG--------------------------

Query:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK
                                                          K+V    + WW  K+G Y E+ R  LV+S I  P +P+ PK  G++  GK
Subjt:  --------------------------------------------------KYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGK

Query:  RIHMFE---PDEFRSRDNDHYNNFGL
         I + E   P+       DH N  GL
Subjt:  RIHMFE---PDEFRSRDNDHYNNFGL

A0A5D3DAL3 PMD domain-containing protein1.1e-3737.68Show/hide
Query:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV----------------------------SLRSEVFKVASLMAE-------
        ++  +KY KPP RK KK SRPRSTHNPNG PIK  DWSE EL  F +LGV                            SLR EVFKVASLMAE       
Subjt:  SKKNLKYEKPPARKAKKASRPRSTHNPNGVPIKCSDWSERELEFFCELGV----------------------------SLRSEVFKVASLMAE-------

Query:  ---------------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVH------------------------
                             GHS ACFP+HYV+ WL  YFNTHY  P  +RGP MVEFSGEGGAKY+ + EAR +                        
Subjt:  ---------------------GHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVH------------------------

Query:  -----------IHKGKYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKV--GNDNRGKRIHMFEPDE
                    H   ++  H  +WWLA +G+YL+EG + L+        K K  KK+    D+  K+I   + +E
Subjt:  -----------IHKGKYVLCHTSSWWLAKNGNYLEEGREKLVASVISLPPKPKFPKKV--GNDNRGKRIHMFEPDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATTTCACTGAGCATCCTAATCCTGAGAAAAACTCCTTAGTCATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCGTGTAGGAGATGCGGA
GGGGTACATGAATGAACCGAGGCCACATCTGAATGAGAGGGATCCTAAGGACATGAGAGTATGGAAGCATGTGAGTGAGGACGAAGCATGTGAGTCAGGACAAAGCATGC
TAAAAGGACCCCGTGATGTTTGTGGGGACAGTCTTCAATCTAAGAAAAATTTGAAGTATGAGAAGCCTCCTGCTCGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACT
CATAATCCAAATGGAGTTCCGATCAAGTGTTCTGACTGGTCTGAGAGAGAACTTGAGTTCTTTTGTGAGCTGGGTGTTTCTCTTCGTTCGGAGGTCTTCAAAGTTGCAAG
CCTTATGGCAGAAGGACATTCAGAGGCTTGTTTTCCAATGCATTATGTTTACGCTTGGCTTTCTTACTATTTTAACACGCATTATGCAGTTCCAGAAAAGGTTAGGGGCC
CAATGATGGTTGAGTTTTCCGGAGAGGGTGGAGCTAAATATTTTGACGATTTTGAGGCTCGTGTACATATTCATAAAGGTAAATATGTATTGTGCCACACATCCAGTTGG
TGGTTGGCAAAAAATGGAAATTATCTTGAAGAAGGCAGAGAAAAATTGGTGGCTAGTGTTATTTCTCTTCCTCCCAAGCCAAAATTTCCCAAAAAGGTTGGTAACGACAA
CAGAGGCAAAAGGATTCACATGTTTGAACCCGATGAATTTCGTTCTAGGGATAATGATCACTACAACAATTTTGGGCTTAGATGTCAGTTCTGCACCGTTATTAAACCCC
ATATGATCGCAGATTTGAATCCGTTATTGTTCTGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTATTTCACTGAGCATCCTAATCCTGAGAAAAACTCCTTAGTCATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCGTGTAGGAGATGCGGA
GGGGTACATGAATGAACCGAGGCCACATCTGAATGAGAGGGATCCTAAGGACATGAGAGTATGGAAGCATGTGAGTGAGGACGAAGCATGTGAGTCAGGACAAAGCATGC
TAAAAGGACCCCGTGATGTTTGTGGGGACAGTCTTCAATCTAAGAAAAATTTGAAGTATGAGAAGCCTCCTGCTCGAAAAGCAAAGAAAGCTAGTCGTCCTCGTTCGACT
CATAATCCAAATGGAGTTCCGATCAAGTGTTCTGACTGGTCTGAGAGAGAACTTGAGTTCTTTTGTGAGCTGGGTGTTTCTCTTCGTTCGGAGGTCTTCAAAGTTGCAAG
CCTTATGGCAGAAGGACATTCAGAGGCTTGTTTTCCAATGCATTATGTTTACGCTTGGCTTTCTTACTATTTTAACACGCATTATGCAGTTCCAGAAAAGGTTAGGGGCC
CAATGATGGTTGAGTTTTCCGGAGAGGGTGGAGCTAAATATTTTGACGATTTTGAGGCTCGTGTACATATTCATAAAGGTAAATATGTATTGTGCCACACATCCAGTTGG
TGGTTGGCAAAAAATGGAAATTATCTTGAAGAAGGCAGAGAAAAATTGGTGGCTAGTGTTATTTCTCTTCCTCCCAAGCCAAAATTTCCCAAAAAGGTTGGTAACGACAA
CAGAGGCAAAAGGATTCACATGTTTGAACCCGATGAATTTCGTTCTAGGGATAATGATCACTACAACAATTTTGGGCTTAGATGTCAGTTCTGCACCGTTATTAAACCCC
ATATGATCGCAGATTTGAATCCGTTATTGTTCTGGGTGTGA
Protein sequenceShow/hide protein sequence
MVYFTEHPNPEKNSLVILKDRDQPVENGVILRVGDAEGYMNEPRPHLNERDPKDMRVWKHVSEDEACESGQSMLKGPRDVCGDSLQSKKNLKYEKPPARKAKKASRPRST
HNPNGVPIKCSDWSERELEFFCELGVSLRSEVFKVASLMAEGHSEACFPMHYVYAWLSYYFNTHYAVPEKVRGPMMVEFSGEGGAKYFDDFEARVHIHKGKYVLCHTSSW
WLAKNGNYLEEGREKLVASVISLPPKPKFPKKVGNDNRGKRIHMFEPDEFRSRDNDHYNNFGLRCQFCTVIKPHMIADLNPLLFWV