; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035782 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035782
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:30176047..30177165
RNA-Seq ExpressionLag0035782
SyntenyLag0035782
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]4.6e-3227.47Show/hide
Query:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRK
        +P+R+  +EDE+IW     G +++KS Y  A+      + P   S    SK  W  IW L    +++I +W+A  N LP+ EN+  R +     C  C+ 
Subjt:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRK

Query:  ENEDIEHIFWKCGLVRKIW-------DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE
          E++ H    C   +K+W       D        +LS             G+ ++ +  +  + + ++W+ WN+RN+    + K  R +N Q V+   E
Subjt:  ENEDIEHIFWKCGLVRKIW-------DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE

Query:  SMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYE
        ++    K + P A K  ++   W PP+    K+NTDAA   + N  G+   IRD N  +     K  + H  +   EA A+  GL+ A       +  + 
Subjt:  SMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYE

Query:  IPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAV
          +++ESD+  V+ L+N      SEI +++ EI +L      V   Y  R CN +AH+LA++A+
Subjt:  IPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAV

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.5e-3830.39Show/hide
Query:  KEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEH
        +EDE++W  D KG +S+KS Y LA+ ++     P      +SS ++WK  W LD   +VKI MW+A+ N LPT EN+  R       C  C+ + E + H
Subjt:  KEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEH

Query:  IFWKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRD---EARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSP
        +  +C   RKIWD   P + Q            D++  + ++ +R    EA +     W +W++RNK      K+D +    +    +++ QR SK  + 
Subjt:  IFWKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRD---EARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSP

Query:  CASKTH-LSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAA
          +K   +    WKPP  N  KLN DAA        G+   +RD+   ++    K+ +   ++ L EA AI  GL+ A + S          L+VESD  
Subjt:  CASKTH-LSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAA

Query:  WVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAVFN-SVDCW
         V++L+N      +EI +++ ++         V F +  R CN  AH LA+ A+ N S D W
Subjt:  WVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAVFN-SVDCW

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]3.2e-3329.95Show/hide
Query:  EDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHI
        EDE++W  D +G +S+KS Y LA++     K P S S   +S K W ++W L+   ++KI MW+A NN LP+ EN+  R V     C  C+   E I H 
Subjt:  EDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHI

Query:  FWKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYW---DGLIKIINRDEARIASQVIWSVWNSRNKL------KNSITKADRQQNLQEVIDGVESMQRES
          +C   RKIW      +    SA R      D +     + K + + +  +   + WS W +RNK        N I  A + +++      V   Q+  
Subjt:  FWKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYW---DGLIKIINRDEARIASQVIWSVWNSRNKL------KNSITKADRQQNLQEVIDGVESMQRES

Query:  KYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVE
           S  +         W PP  N +K+N DAA+     + GV   IRDSN  ++ A   +        L EA A++ GL+ A  R+ D        L++E
Subjt:  KYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVE

Query:  SDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAVFNSVDC
        SD   V++L+N      SEI + I  I         V+  +  R CN  AH LA++A+     C
Subjt:  SDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAVFNSVDC

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]3.5e-3227.1Show/hide
Query:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRK
        +P+R  ++EDE+IW     G +++KS Y    Q+  + + P   S   SSK  W  IW L    +++I +W+A  N LP+ EN+  R +     C  C+ 
Subjt:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRK

Query:  ENEDIEHIFWKCGLVRKIW-------DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE
          E++ H    C   +K+W       D        +LS             G+ ++ +  +  + + ++W+ WN+RN+    + K  R +N Q V+   E
Subjt:  ENEDIEHIFWKCGLVRKIW-------DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE

Query:  SMQRESKYLSPCASKTH-----LSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDY
        ++    K + P A  +H     ++   W PP+    K+NTDAA   + N  G+   IRD N  +     K  + H  +   EA A+  GL+ A       
Subjt:  SMQRESKYLSPCASKTH-----LSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDY

Query:  QGRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAV
        +  +   +++ESD+  V+ L+N      SEI +++ EI +L      V   Y  R CN +AH+L ++A+
Subjt:  QGRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAV

XP_030940268.1 uncharacterized protein LOC115965235 [Quercus lobata]1.6e-3229.49Show/hide
Query:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIF
        D  +W   +KG ++ +SAY L    +R      + SD S  K MWK IW L    ++K  +WKA NNA+PT+ N+  R V     C  C  E ED  H  
Subjt:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIF

Query:  WKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSPCASKT
        W C ++R +W+T   ++T+      ++  FAD  D   +     +  + + + WS+W  RN         DR++     +  + S  R   +L   AS  
Subjt:  WKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSPCASKT

Query:  HLS----HGS-------WKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVV
        HL+    H S       W PP    +K+N D A F+D  A G+   IRDS+  +IGA  ++I   S +  +EA A    ++FA+E S           + 
Subjt:  HLS----HGS-------WKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVV

Query:  ESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLAR
        E DA  V K ++  V ++ +   ++ +   L        F +  R  N +AH LAR
Subjt:  ESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLAR

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein2.8e-3530.85Show/hide
Query:  KEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEH
        K D+I+W  D KG +S+KS Y +A+    + K P   S  SS+   W  IW L+   ++KI MWKA  N LPT EN+  R +     C  C+ + EDI H
Subjt:  KEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEH

Query:  IFWKCGLVRKIW--DTFVPKVTQVLSACRSWWKFADYWDGLIKIINR---DEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYL
            C   +K+W    FV ++ Q+L          D    L +++NR   DE R+   + W+ W++RN       + D Q ++ +    VES  R     
Subjt:  IFWKCGLVRKIW--DTFVPKVTQVLSACRSWWKFADYWDGLIKIINR---DEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYL

Query:  SPCASKTHLSHGS-WKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESD
           A+K   + G+ W PP    +K N DAA   + N  G+   IRD + ++I A     + H  +   EA A+  GL+  +E S         PL++E+D
Subjt:  SPCASKTHLSHGS-WKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESD

Query:  AAWVIKLINREVEDNSEISFLIDEIAE-LGLRAGVVMFGYCSRFCNFLAHNLARVAVFNSVDC
           V+  +       +EI + I EI + L     +V      R CN +AH LA++A+ N   C
Subjt:  AAWVIKLINREVEDNSEISFLIDEIAE-LGLRAGVVMFGYCSRFCNFLAHNLARVAVFNSVDC

A0A2H5Q972 Uncharacterized protein (Fragment)2.2e-3227.47Show/hide
Query:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRK
        +P+R+  +EDE+IW     G +++KS Y  A+      + P   S    SK  W  IW L    +++I +W+A  N LP+ EN+  R +     C  C+ 
Subjt:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRK

Query:  ENEDIEHIFWKCGLVRKIW-------DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE
          E++ H    C   +K+W       D        +LS             G+ ++ +  +  + + ++W+ WN+RN+    + K  R +N Q V+   E
Subjt:  ENEDIEHIFWKCGLVRKIW-------DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE

Query:  SMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYE
        ++    K + P A K  ++   W PP+    K+NTDAA   + N  G+   IRD N  +     K  + H  +   EA A+  GL+ A       +  + 
Subjt:  SMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYE

Query:  IPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAV
          +++ESD+  V+ L+N      SEI +++ EI +L      V   Y  R CN +AH+LA++A+
Subjt:  IPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVAV

A0A2N9GM07 Reverse transcriptase domain-containing protein3.8e-3230.25Show/hide
Query:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLA--VQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFC
        +P  +I  ED+ +W  ++ G F++KSAYH+A  +Q     ++  +G    S   +WK+IW +    +++I  W+     LPT+E ++ RG++ N  C  C
Subjt:  MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLA--VQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFC

Query:  RKENEDIEHIFWKCGLVRKIW--DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIAS-----QVIWSVWNSRNKLKNSITKADRQQNLQEVIDG
         +  E I H  W+C  +R+IW    F+  +   +S  R            I +I  ++  I        V W+VW  RNK  ++    D+    QEV   
Subjt:  RKENEDIEHIFWKCGLVRKIW--DTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIAS-----QVIWSVWNSRNKLKNSITKADRQQNLQEVIDG

Query:  VESMQRESKYLSPCASKTH-LSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDS-LIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQ
         + M  E + L P  S  H +    W+ PE   +K+NTD A F      G+   IRD   S L G   + I  HS  +++EA AI EG   A E    + 
Subjt:  VESMQRESKYLSPCASKTH-LSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDS-LIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQ

Query:  GRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVA
              +VVESDA  ++  IN E  D   I  +I  I  L          Y  R  N +AH LA+ A
Subjt:  GRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVA

A0A2N9H1N4 RNase H domain-containing protein3.8e-3227.27Show/hide
Query:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIF
        D ++WG+   G +S+KS YHL +  +   ++    SD S   ++WKS+W L+  P+ +  +W+A +N+LPT  N+ +R +  + +C  C K+ E   H  
Subjt:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIF

Query:  WKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGV----ESMQRESKY-LSP
        W+C  V+ +W +      Q L A  ++  F D       +++  E ++ S + WS+W  RN+L+   +  +  Q +Q   D +    E+  RE +    P
Subjt:  WKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGV----ESMQRESKY-LSP

Query:  CASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAW
         +S T      W PP   ++K+N D A F D NA G+   IR+    ++G+  ++      ++ +EA A    ++FA    RD  G  +I L  E D+  
Subjt:  CASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAW

Query:  VIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVA
        V++ +       +  + +I++  ++      V+F + +R  N +AH LA+ A
Subjt:  VIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVA

A0A4Y1R838 Ribonuclease H-like superfamily protein1.4e-3129.01Show/hide
Query:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQ----YKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDI
        D ++W    +G ++++S Y LA+   R      K  G GS Q +   +WK IW L   P+++  +WKA  NAL    N+K R V  ++ C FC  E+E  
Subjt:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQ----YKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDI

Query:  EHIFWKCGLVRKIWDT----FVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNS---ITKADRQQNLQEVID--GVESMQ
        EH+F+ C   R +W      F  +          W    +++D   ++   +  ++ + V+W +W  RN L  +   I   D    L   +D   V ++ 
Subjt:  EHIFWKCGLVRKIWDT----FVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNS---ITKADRQQNLQEVID--GVESMQ

Query:  RESKYLSPCASKTHLSHGS--WKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEI
               P A    +   S  W  P     KLN D AW      GGV W +RD     I A      R +   + EA A+ E L + +E   D       
Subjt:  RESKYLSPCASKTHLSHGS--WKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEI

Query:  PLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVA
         + VESD+  +IK++N+E   + EI  ++ ++  L  RA  V F Y  R CN  AHN+A  A
Subjt:  PLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein6.2e-1923.9Show/hide
Query:  KEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSG----SDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENE
        K D+IIW  ++ G ++++S Y L         DP +     +    S  +   IW L   P++K  +W+A++ AL T E +  RG+  +  C  C +ENE
Subjt:  KEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSG----SDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENE

Query:  DIEHIFWKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQ--------VIWSVWNSR-----NKLKNSITKADRQQNLQEVID
         I H  + C      W           S  R+     D+ + +  I+N  +    S         +IW +W +R     NK + S +K        E  D
Subjt:  DIEHIFWKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQ--------VIWSVWNSR-----NKLKNSITKADRQQNLQEVID

Query:  GVESMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQG
         + + Q   K  SP       +   W+ P     K N DA +          W IR+   + I     K+   S     E +A++  L+    R      
Subjt:  GVESMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQG

Query:  RYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLAR
             + +E D   +I LIN  +  +S ++  +++I+    +   + FG+  R  N LAH LA+
Subjt:  RYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLAR

AT3G25270.1 Ribonuclease H-like superfamily protein4.4e-1722.86Show/hide
Query:  IWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIFWKCGLVRKIWD--------------TFVPKVTQVLSACRSWWKFADY
        IW+L   P++K  +WK ++ AL T +N+K R +  + +C  C +E+E  +H+F+ C   +++W               T   K+  +LS+C         
Subjt:  IWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIFWKCGLVRKIWD--------------TFVPKVTQVLSACRSWWKFADY

Query:  WDGLIKIINRDEA--RIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSPCASKTH--------LSHGSWKPPEINQWKLNTDAAW
              + NR      +A  ++W +W SRN+L         Q  LQ   + V+  +  + Y+     + H        ++   W+ P     K N D A+
Subjt:  WDGLIKIINRDEA--RIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSPCASKTH--------LSHGSWKPPEINQWKLNTDAAW

Query:  FDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAWVIKLINRE
                  W +RD N   +G+        S     E +A++  ++ A   S+ Y+      ++ E D+  V +L+N E
Subjt:  FDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAWVIKLINRE

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.5e-0636.07Show/hide
Query:  IWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIFWKCGLVRK
        IW L   P++K+ +WKA+NNALP    + +R +     C  CR + E I HI + C   ++
Subjt:  IWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIFWKCGLVRK

AT4G29090.1 Ribonuclease H-like superfamily protein9.2e-2324.51Show/hide
Query:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIF
        D   W   S G +++KS Y +  Q   +   P   S+ S +  +++ IW+    P+++  +WK ++N+LP    +  R +   S C  C    E + H+ 
Subjt:  DEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIF

Query:  WKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIIN--------RDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKY
        +KC   R  W      ++ +       W  + Y + L  + N           +++   ++W +W +RN+L     + + Q+ L+   D +E  +  ++ 
Subjt:  WKCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIIN--------RDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKY

Query:  LSPCASKTHL---SHGSWKPPEINQW-KLNTDAAWFDDFNAGGVSWCIRDSNDSL--IGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIP
         S C +K  +   S G W+PP  +QW K NTDA W  D    G+ W +R+    +  +GAR        K+K +   A +E + +A+     +Q  Y   
Subjt:  LSPCASKTHL---SHGSWKPPEINQW-KLNTDAAWFDDFNAGGVSWCIRDSNDSL--IGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIP

Query:  LVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLAR
        ++ ESD+  +I+++N + E    +   I ++  L  +   V F +  R  N LA  +AR
Subjt:  LVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLAR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-0420.3Show/hide
Query:  VIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE-----SMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGA
        ++W +W S N L  + T+   Q  ++  ++  +     +M  E +  +  A  +   +  W PP  ++ K N DA+  +     G+ W +R+S  ++I  
Subjt:  VIWSVWNSRNKLKNSITKADRQQNLQEVIDGVE-----SMQRESKYLSPCASKTHLSHGSWKPPEINQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGA

Query:  RFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARV
           K +     +  E   ++    +AI+ S  +  +    ++ E D   + ++IN +   N  +   +D I         + F +  R  N  A  LA+ 
Subjt:  RFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELGLRAGVVMFGYCSRFCNFLAHNLARV

Query:  AV
        A+
Subjt:  AV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAAGAGGAACATTGTCAAGGAGGATGAGATTATTTGGGGAAAAGACTCCAAAGGCTATTTTTCGCTTAAAAGTGCTTATCACCTAGCTGTGCAAAAGGATCGTCA
ATATAAGGATCCCGGTTCTGGCTCTGATCAGTCCTCATCTAAGAAAATGTGGAAGTCCATATGGGAGTTGGACTGCTGGCCGAGAGTGAAAATTAATATGTGGAAAGCGA
TGAATAATGCGTTGCCTACTATCGAGAATATTAAGAATCGGGGTGTGGATACTAACTCTAAATGTTTCTTTTGCAGGAAGGAAAATGAAGACATCGAGCATATTTTCTGG
AAGTGTGGTCTGGTAAGAAAAATCTGGGATACATTTGTCCCTAAAGTAACCCAGGTACTATCTGCTTGCAGGAGTTGGTGGAAGTTTGCGGACTATTGGGATGGACTAAT
CAAAATTATAAATAGAGACGAAGCAAGGATTGCCAGCCAAGTCATTTGGTCGGTTTGGAATAGCAGAAATAAACTAAAAAATTCTATCACCAAAGCAGATCGTCAGCAAA
ATTTACAGGAGGTGATAGACGGGGTTGAAAGCATGCAAAGAGAGTCCAAGTACCTGTCGCCTTGTGCATCGAAGACCCATCTGAGTCATGGGAGCTGGAAACCGCCGGAA
ATCAATCAGTGGAAATTAAACACAGACGCTGCGTGGTTCGATGATTTCAACGCAGGAGGAGTTAGTTGGTGCATCCGTGACTCAAACGATTCTTTGATCGGCGCGAGATT
CAAGAAAATTGAAAGACATTCAAAAATCAAATTGATGGAAGCAAGGGCCATCGTTGAAGGTTTGGAATTCGCTATTGAAAGGAGTAGAGATTACCAAGGAAGATATGAGA
TTCCACTGGTGGTGGAATCCGATGCTGCTTGGGTCATCAAGCTTATCAACCGTGAAGTAGAAGACAATTCTGAAATCTCCTTCTTGATCGATGAGATTGCAGAGTTAGGG
CTGAGGGCAGGCGTGGTGATGTTCGGTTACTGCTCTCGATTTTGTAATTTCTTGGCGCATAACCTTGCGCGCGTAGCCGTTTTTAATAGTGTCGATTGTTGGAATTTTTT
GATCCTTCTCTGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAAGAGGAACATTGTCAAGGAGGATGAGATTATTTGGGGAAAAGACTCCAAAGGCTATTTTTCGCTTAAAAGTGCTTATCACCTAGCTGTGCAAAAGGATCGTCA
ATATAAGGATCCCGGTTCTGGCTCTGATCAGTCCTCATCTAAGAAAATGTGGAAGTCCATATGGGAGTTGGACTGCTGGCCGAGAGTGAAAATTAATATGTGGAAAGCGA
TGAATAATGCGTTGCCTACTATCGAGAATATTAAGAATCGGGGTGTGGATACTAACTCTAAATGTTTCTTTTGCAGGAAGGAAAATGAAGACATCGAGCATATTTTCTGG
AAGTGTGGTCTGGTAAGAAAAATCTGGGATACATTTGTCCCTAAAGTAACCCAGGTACTATCTGCTTGCAGGAGTTGGTGGAAGTTTGCGGACTATTGGGATGGACTAAT
CAAAATTATAAATAGAGACGAAGCAAGGATTGCCAGCCAAGTCATTTGGTCGGTTTGGAATAGCAGAAATAAACTAAAAAATTCTATCACCAAAGCAGATCGTCAGCAAA
ATTTACAGGAGGTGATAGACGGGGTTGAAAGCATGCAAAGAGAGTCCAAGTACCTGTCGCCTTGTGCATCGAAGACCCATCTGAGTCATGGGAGCTGGAAACCGCCGGAA
ATCAATCAGTGGAAATTAAACACAGACGCTGCGTGGTTCGATGATTTCAACGCAGGAGGAGTTAGTTGGTGCATCCGTGACTCAAACGATTCTTTGATCGGCGCGAGATT
CAAGAAAATTGAAAGACATTCAAAAATCAAATTGATGGAAGCAAGGGCCATCGTTGAAGGTTTGGAATTCGCTATTGAAAGGAGTAGAGATTACCAAGGAAGATATGAGA
TTCCACTGGTGGTGGAATCCGATGCTGCTTGGGTCATCAAGCTTATCAACCGTGAAGTAGAAGACAATTCTGAAATCTCCTTCTTGATCGATGAGATTGCAGAGTTAGGG
CTGAGGGCAGGCGTGGTGATGTTCGGTTACTGCTCTCGATTTTGTAATTTCTTGGCGCATAACCTTGCGCGCGTAGCCGTTTTTAATAGTGTCGATTGTTGGAATTTTTT
GATCCTTCTCTGTGCTTGA
Protein sequenceShow/hide protein sequence
MPKRNIVKEDEIIWGKDSKGYFSLKSAYHLAVQKDRQYKDPGSGSDQSSSKKMWKSIWELDCWPRVKINMWKAMNNALPTIENIKNRGVDTNSKCFFCRKENEDIEHIFW
KCGLVRKIWDTFVPKVTQVLSACRSWWKFADYWDGLIKIINRDEARIASQVIWSVWNSRNKLKNSITKADRQQNLQEVIDGVESMQRESKYLSPCASKTHLSHGSWKPPE
INQWKLNTDAAWFDDFNAGGVSWCIRDSNDSLIGARFKKIERHSKIKLMEARAIVEGLEFAIERSRDYQGRYEIPLVVESDAAWVIKLINREVEDNSEISFLIDEIAELG
LRAGVVMFGYCSRFCNFLAHNLARVAVFNSVDCWNFLILLCA