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Lag0035783 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035783
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:30177210..30177773
RNA-Seq ExpressionLag0035783
SyntenyLag0035783
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]9.3e-5050Show/hide
Query:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR
        GG+EVLIKA+AQA+P Y MS F+LP +ICE++ KA A FWWGSS + +  HW  W KLCQ+K  GG+GFR+   FN+A++A+  WRI++ P SLMARVL+
Subjt:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR

Query:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSW
         KYF+ S+F++AK     S  WRSI+WGR + ++G RWK+G+GN V I +  WL     +KP           V D+I EN +W
Subjt:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSW

XP_021621582.1 uncharacterized protein LOC110621626 [Manihot esculenta]1.9e-5055.84Show/hide
Query:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR
        GGKEVLIKA++ AIP+YTMSCFRLP  +C+++N   +NFWWG  +N +K HWV+W KLC+SK  GGLGFR++E FN+A++A+  WRIL +P+SL+ARVL+
Subjt:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR

Query:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWL
        GKY+  S+FL+A     AS  WRS++WGR +  +G RW VGNG +++  ED W+
Subjt:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWL

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]2.0e-5257.41Show/hide
Query:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR
        GGKEVLIKA+AQAIP Y+MSCFR P N+C+E+N   A FWWGS+   +K HW SW++LC SKE GGLGF++L +FN+AMLA+ SW+I+K+P+SL+ RVLR
Subjt:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR

Query:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKP
        GKYF   NF+ A+   N S  WRSI+WG+ LF +G RW++GNG  V I  DPW++   +  P
Subjt:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKP

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]6.4e-5151.61Show/hide
Query:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL
        +GGKEVLIKA+AQAIP YTMSCFRLPK +  E +   A FWWGSSK  +K HWV+W  L   K  GG+GFR+LE+FNKA+LA+  WRIL  P+S+++RVL
Subjt:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL

Query:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDII-HENGSW
        +G+YF   +F++AK  GN S  WRSI+WGR L ++G RW++GNG+ V+I  D W+ +    K +         RV  ++ HE G W
Subjt:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDII-HENGSW

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.1e-5352.94Show/hide
Query:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL
        MGGKEVLIK +AQAIP YT+SCF+LP +IC E+++    FWWGSS   +K HW SW+ LC  K+ GG+GFR++ +FN+AMLA+ SWRIL+ P SL+A+ L
Subjt:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL

Query:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE
        RGKYF   +FL+AK     S  WRSI+WGR LF++GYRWKVGNG  + +  DPWL  + N+ PV          V  ++   G WDE
Subjt:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein3.4e-5048.39Show/hide
Query:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR
        GGKE LIKA+AQAIP Y MS FRLP  +CE++ +  A FWWG+ K+ +  HW SW KLCQ+K  GGLGFR++  FN+A++A+ SWRI+K P SLMA++L+
Subjt:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR

Query:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE
         KYF G++FL+AK     S  WRSI+WGR +   G RW++G G+ V I +  W+     +KP+          V ++I EN  W E
Subjt:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE

A0A6J1CV63 uncharacterized protein LOC1110146629.7e-5357.41Show/hide
Query:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR
        GGKEVLIKA+AQAIP Y+MSCFR P N+C+E+N   A FWWGS+   +K HW SW++LC SKE GGLGF++L +FN+AMLA+ SW+I+K+P+SL+ RVLR
Subjt:  GGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLR

Query:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKP
        GKYF   NF+ A+   N S  WRSI+WG+ LF +G RW++GNG  V I  DPW++   +  P
Subjt:  GKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKP

A0A6J1DAR4 uncharacterized protein LOC1110189543.1e-5151.61Show/hide
Query:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL
        +GGKEVLIKA+AQAIP YTMSCFRLPK +  E +   A FWWGSSK  +K HWV+W  L   K  GG+GFR+LE+FNKA+LA+  WRIL  P+S+++RVL
Subjt:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL

Query:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDII-HENGSW
        +G+YF   +F++AK  GN S  WRSI+WGR L ++G RW++GNG+ V+I  D W+ +    K +         RV  ++ HE G W
Subjt:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDII-HENGSW

A0A6J1DRA0 uncharacterized protein LOC1110224235.1e-5452.94Show/hide
Query:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL
        MGGKEVLIK +AQAIP YT+SCF+LP +IC E+++    FWWGSS   +K HW SW+ LC  K+ GG+GFR++ +FN+AMLA+ SWRIL+ P SL+A+ L
Subjt:  MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVL

Query:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE
        RGKYF   +FL+AK     S  WRSI+WGR LF++GYRWKVGNG  + +  DPWL  + N+ PV          V  ++   G WDE
Subjt:  RGKYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE

A0A803PM68 Uncharacterized protein4.5e-5049.73Show/hide
Query:  GKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRG
        GKE+LIKAI QAIP YTMSCFRLPK     ++   A FWWGSS+   K HW  W  LC+ KE GGLGFR+L +FN+A+LA+  WR ++ P+SL ++VL+ 
Subjt:  GKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRG

Query:  KYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE
         YF     L+AK+  +AS  WRS+VWG+ + ++GYRW++GNGN V + EDPWL     +K         G  V D++  NG WDE
Subjt:  KYFSGSNFLKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.0e-2234.81Show/hide
Query:  GKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRG
        G+  L KA+  ++P+++MS   LP++I   +++    F WGS+   +K H V W K+C  K+ GGLG R  +  N+A+++++ WR+L++ +SL   VL+ 
Subjt:  GKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRG

Query:  KYFSG----SNFLKAKAKGNASIFWRSIVWG-RSLFEEGYRWKVGNGNHVYIDEDPWL
        KY  G    S +L    KG+ S  WRSI  G R +   G  W  G+G  +    D W+
Subjt:  KYFSG----SNFLKAKAKGNASIFWRSIVWG-RSLFEEGYRWKVGNGNHVYIDEDPWL

P93295 Uncharacterized mitochondrial protein AtMg003101.9e-3443.42Show/hide
Query:  AIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKE-NGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNFLK
        A+P+Y MSCFRL K +C+++  A   FWW S +N +K  WV+W+KLC+SKE +GGLGFR+L  FN+A+LA+ S+RI+  P +L++R+LR +YF  S+ ++
Subjt:  AIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKE-NGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNFLK

Query:  AKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPV
               S  WRSI+ GR L   G    +G+G H  +  D W+M  +   P+
Subjt:  AKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPV

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-0927.59Show/hide
Query:  GKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLS---------WRILKDPS
        G+  LI ++  ++  + MS FRLP    +E++  C++F W   +   K   V+W  +C  K+ GGLG R L+  NK     +S         W+ +    
Subjt:  GKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLS---------WRILKDPS

Query:  SLMARVLRGKYFSGSN
        +L +  ++    +GSN
Subjt:  SLMARVLRGKYFSGSN

AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-3035.96Show/hide
Query:  AIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNFLKA
        A+P YTM+CF LPK +C+++    A+FWW + +  +  HW +W  L   K  GG+GF+++E FN A+L +  WR+L  P SLMA+V + +YF  S+ L A
Subjt:  AIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNFLKA

Query:  KAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVK----EEWNG----RRVKDIIHENG
              S  W+SI   + +  +G R  VGNG  + I    WL S      +R++    +E+       +V D+I E+G
Subjt:  KAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVK----EEWNG----RRVKDIIHENG

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.4e-3543.42Show/hide
Query:  AIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKE-NGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNFLK
        A+P+Y MSCFRL K +C+++  A   FWW S +N +K  WV+W+KLC+SKE +GGLGFR+L  FN+A+LA+ S+RI+  P +L++R+LR +YF  S+ ++
Subjt:  AIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKE-NGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNFLK

Query:  AKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPV
               S  WRSI+ GR L   G    +G+G H  +  D W+M  +   P+
Subjt:  AKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGAAAGAGGTCCTTATCAAAGCAATAGCCCAAGCAATCCCGATCTACACAATGAGTTGTTTTAGACTTCCTAAGAACATTTGTGAGGAAGTCAACAAAGCTTG
TGCAAATTTTTGGTGGGGTTCTTCAAAGAACGGTCAGAAAGCTCATTGGGTTAGTTGGAGGAAGTTATGCCAAAGTAAAGAGAATGGAGGGTTGGGTTTTAGAGAGCTTG
AGATGTTTAATAAGGCGATGTTAGCAAGGTTAAGTTGGAGAATTCTCAAGGACCCGAGTAGTCTTATGGCAAGAGTTCTTAGAGGGAAATACTTCTCCGGTAGTAATTTC
CTAAAAGCAAAAGCCAAAGGGAATGCTTCTATCTTTTGGAGAAGTATAGTGTGGGGAAGATCATTATTCGAGGAGGGCTATAGGTGGAAAGTAGGCAATGGGAATCACGT
GTACATAGACGAAGATCCTTGGCTCATGAGTAATAGTAATTGGAAGCCGGTTAGAGTGAAGGAAGAGTGGAATGGGAGAAGAGTAAAGGACATCATCCATGAGAATGGTT
CGTGGGATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGAAAGAGGTCCTTATCAAAGCAATAGCCCAAGCAATCCCGATCTACACAATGAGTTGTTTTAGACTTCCTAAGAACATTTGTGAGGAAGTCAACAAAGCTTG
TGCAAATTTTTGGTGGGGTTCTTCAAAGAACGGTCAGAAAGCTCATTGGGTTAGTTGGAGGAAGTTATGCCAAAGTAAAGAGAATGGAGGGTTGGGTTTTAGAGAGCTTG
AGATGTTTAATAAGGCGATGTTAGCAAGGTTAAGTTGGAGAATTCTCAAGGACCCGAGTAGTCTTATGGCAAGAGTTCTTAGAGGGAAATACTTCTCCGGTAGTAATTTC
CTAAAAGCAAAAGCCAAAGGGAATGCTTCTATCTTTTGGAGAAGTATAGTGTGGGGAAGATCATTATTCGAGGAGGGCTATAGGTGGAAAGTAGGCAATGGGAATCACGT
GTACATAGACGAAGATCCTTGGCTCATGAGTAATAGTAATTGGAAGCCGGTTAGAGTGAAGGAAGAGTGGAATGGGAGAAGAGTAAAGGACATCATCCATGAGAATGGTT
CGTGGGATGAGTAA
Protein sequenceShow/hide protein sequence
MGGKEVLIKAIAQAIPIYTMSCFRLPKNICEEVNKACANFWWGSSKNGQKAHWVSWRKLCQSKENGGLGFRELEMFNKAMLARLSWRILKDPSSLMARVLRGKYFSGSNF
LKAKAKGNASIFWRSIVWGRSLFEEGYRWKVGNGNHVYIDEDPWLMSNSNWKPVRVKEEWNGRRVKDIIHENGSWDE