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Lag0035789 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035789
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr3:30230616..30231730
RNA-Seq ExpressionLag0035789
SyntenyLag0035789
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]3.5e-1632.37Show/hide
Query:  EKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQA--NE---------GSFESCGQQGV----------
        E+GF  +  A  E +   + + KW+ F A P+  V+PLVREFY +  E      +VRG+  PF     NE          +FE+  + G+          
Subjt:  EKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQA--NE---------GSFESCGQQGV----------

Query:  ----QWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEIL
            QWK ++ +  S   + L   + +WL FI  R++PT H   ++ DR +LLYC+M G   +VG II D I+
Subjt:  ----QWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.6e-1931.86Show/hide
Query:  FKDVIFQERMESMKKRNFLN-EKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------E
        F+    + R E+  +   LN EKGF   +      L F+++VI Q+ W++F AHP++ +VPLVREFY +L +   +   VRG                 +
Subjt:  FKDVIFQERMESMKKRNFLN-EKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------E

Query:  PFGQANE-----------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILAC
        P  + +E              E+    G +W  S     + + S L P + VW HF+++ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC
Subjt:  PFGQANE-----------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILAC

Query:  GRKR
          ++
Subjt:  GRKR

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.9e-2032.29Show/hide
Query:  SMKKRNFLNEKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------EPFGQANE-----
        +++ R    EKGF   +      L F+++VI Q+ W++F AHP++ +VPLVREFY +L +   +   VRG                 +P  + +E     
Subjt:  SMKKRNFLNEKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------EPFGQANE-----

Query:  ------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKR
                 E+    G +W  S     + + S L P + VW HF+++RL+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++
Subjt:  ------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKR

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.7e-1831.96Show/hide
Query:  ESMKKRNFLNEKGFS-DRARALLE--FVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQANEGSFESCGQQ----------
        E+++ R    EK F  D ++ L +  F++ VI Q+ WQ F AHP++ +VPLVREFY ++         +RG   P       +  S G            
Subjt:  ESMKKRNFLNEKGFS-DRARALLE--FVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQANEGSFESCGQQ----------

Query:  ----------------GVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRA
                        G +W  S     + + S L P + VW HF+++RL+PTTH  T+S + V LLY ++ G  INVG +I  EI AC  +++
Subjt:  ----------------GVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRA

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.0e-1530.69Show/hide
Query:  KDVIFQERMESMKKRNFLNEKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGK---MEPFGQANEGSFESCGQQG
        K V  + R  +   R+ L E+GF +    + E+V + I +  W+  +A        LV+EFY ++         VRG    + P  +  E +     +  
Subjt:  KDVIFQERMESMKKRNFLNEKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGK---MEPFGQANEGSFESCGQQG

Query:  VQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRATPQSG-LNVASP
          W  S     SL P D+  ++ VW++ ++NRL+PT++DS+I  +R M++Y L+KG+E N G +IR+EI +C  K A  ++   NV  P
Subjt:  VQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRATPQSG-LNVASP

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein1.7e-1632.37Show/hide
Query:  EKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQA--NE---------GSFESCGQQGV----------
        E+GF  +  A  E +   + + KW+ F A P+  V+PLVREFY +  E      +VRG+  PF     NE          +FE+  + G+          
Subjt:  EKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQA--NE---------GSFESCGQQGV----------

Query:  ----QWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEIL
            QWK ++ +  S   + L   + +WL FI  R++PT H   ++ DR +LLYC+M G   +VG II D I+
Subjt:  ----QWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEIL

A0A2P5AGA5 Uncharacterized protein (Fragment)3.7e-1931.86Show/hide
Query:  FKDVIFQERMESMKKRNFLN-EKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------E
        F+    + R E+  +   LN EKGF   +      L F+++VI Q+ W++F AHP++ +VPLVREFY +L +   +   VRG                 +
Subjt:  FKDVIFQERMESMKKRNFLN-EKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------E

Query:  PFGQANE-----------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILAC
        P  + +E              E+    G +W  S     + + S L P + VW HF+++ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC
Subjt:  PFGQANE-----------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILAC

Query:  GRKR
          ++
Subjt:  GRKR

A0A2P5BCG4 Uncharacterized protein (Fragment)3.3e-2032.29Show/hide
Query:  SMKKRNFLNEKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------EPFGQANE-----
        +++ R    EKGF   +      L F+++VI Q+ W++F AHP++ +VPLVREFY +L +   +   VRG                 +P  + +E     
Subjt:  SMKKRNFLNEKGF---SDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKM---------------EPFGQANE-----

Query:  ------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKR
                 E+    G +W  S     + + S L P + VW HF+++RL+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++
Subjt:  ------GSFESCGQQGVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKR

A0A2P5DAQ2 Uncharacterized protein8.2e-1931.96Show/hide
Query:  ESMKKRNFLNEKGFS-DRARALLE--FVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQANEGSFESCGQQ----------
        E+++ R    EK F  D ++ L +  F++ VI Q+ WQ F AHP++ +VPLVREFY ++         +RG   P       +  S G            
Subjt:  ESMKKRNFLNEKGFS-DRARALLE--FVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQANEGSFESCGQQ----------

Query:  ----------------GVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRA
                        G +W  S     + + S L P + VW HF+++RL+PTTH  T+S + V LLY ++ G  INVG +I  EI AC  +++
Subjt:  ----------------GVQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRA

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220075.0e-1630.69Show/hide
Query:  KDVIFQERMESMKKRNFLNEKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGK---MEPFGQANEGSFESCGQQG
        K V  + R  +   R+ L E+GF +    + E+V + I +  W+  +A        LV+EFY ++         VRG    + P  +  E +     +  
Subjt:  KDVIFQERMESMKKRNFLNEKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGK---MEPFGQANEGSFESCGQQG

Query:  VQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRATPQSG-LNVASP
          W  S     SL P D+  ++ VW++ ++NRL+PT++DS+I  +R M++Y L+KG+E N G +IR+EI +C  K A  ++   NV  P
Subjt:  VQWKESQTKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRATPQSG-LNVASP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTGAGGTATTTAAAGATGTTATTTTTCAGGAAAGGATGGAGAGCATGAAGAAAAGGAATTTCCTCAATGAAAAGGGATTCTCTGACCGAGCAAGAGCACTGCT
AGAGTTCGTAAGTAGAGTTATCTTCCAGTACAAGTGGCAGGAGTTCTATGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTTCGTGAATTTTACGTCAGCCTGAGGGAAG
AAAGCATTAGCATGGCGGTGGTGAGGGGGAAGATGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAATCTTGTGGCCAACAAGGGGTCCAATGGAAAGAATCGCAG
ACAAAAGTGAAGTCTCTAGTGCCAAGCGACTTAAAGCCAGAATCGGCAGTGTGGCTTCACTTCATCCAGAACCGTTTGATGCCAACCACCCACGATAGCACGATTTCAGT
AGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAGATCAACGTAGGGAGCATCATCAGGGATGAAATCTTAGCCTGTGGACGGAAAAGGGCCACACCTCAAT
CAGGGTTGAATGTAGCCTCTCCATTCCAACACGCTCCTTTTACAGGGCCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCATCACCAGCTTGATCAAATCAAGGAGAAC
CTGAAGACATACTGGACATATGCCAAGGAGAGGGATGAAGCTATTAGAGAGTTTATCTCTCCATTACCCCAAGCATCGCTCCAGTCTTTCCTAATTTCCTTCAGTCGTTG
CTGCCCCAGGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGATAATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATAGGGGAGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCTGAGGTATTTAAAGATGTTATTTTTCAGGAAAGGATGGAGAGCATGAAGAAAAGGAATTTCCTCAATGAAAAGGGATTCTCTGACCGAGCAAGAGCACTGCT
AGAGTTCGTAAGTAGAGTTATCTTCCAGTACAAGTGGCAGGAGTTCTATGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTTCGTGAATTTTACGTCAGCCTGAGGGAAG
AAAGCATTAGCATGGCGGTGGTGAGGGGGAAGATGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAATCTTGTGGCCAACAAGGGGTCCAATGGAAAGAATCGCAG
ACAAAAGTGAAGTCTCTAGTGCCAAGCGACTTAAAGCCAGAATCGGCAGTGTGGCTTCACTTCATCCAGAACCGTTTGATGCCAACCACCCACGATAGCACGATTTCAGT
AGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAGATCAACGTAGGGAGCATCATCAGGGATGAAATCTTAGCCTGTGGACGGAAAAGGGCCACACCTCAAT
CAGGGTTGAATGTAGCCTCTCCATTCCAACACGCTCCTTTTACAGGGCCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCATCACCAGCTTGATCAAATCAAGGAGAAC
CTGAAGACATACTGGACATATGCCAAGGAGAGGGATGAAGCTATTAGAGAGTTTATCTCTCCATTACCCCAAGCATCGCTCCAGTCTTTCCTAATTTCCTTCAGTCGTTG
CTGCCCCAGGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGATAATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATAGGGGAGTTTTCTGA
Protein sequenceShow/hide protein sequence
MFSEVFKDVIFQERMESMKKRNFLNEKGFSDRARALLEFVSRVIFQYKWQEFYAHPQEAVVPLVREFYVSLREESISMAVVRGKMEPFGQANEGSFESCGQQGVQWKESQ
TKVKSLVPSDLKPESAVWLHFIQNRLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRATPQSGLNVASPFQHAPFTGPSPASEALGMVHHQLDQIKEN
LKTYWTYAKERDEAIREFISPLPQASLQSFLISFSRCCPRKKRILMKRKMKIMKRKRVPRTRNRGVF