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Lag0035792 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035792
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr3:30352627..30353507
RNA-Seq ExpressionLag0035792
SyntenyLag0035792
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]3.3e-5154.4Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYIP+N F ++A++ F DP Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KR LSKFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+D  V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]1.9e-5154.95Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYIP+N F ++A++ F DP Y CF F   +L+PTIEEY  ML++ EK  E++Y FNP+ T KR LSKFL  VH  E+QK +KVKG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+D  V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]3.3e-5154.4Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYIP+N F ++A++ F DP Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KR LSKFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+D  V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]4.9e-4752.91Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFLVVHLKEVQKNVKVKGVEES
        MFSK+Y HIA+LMYI +N F ++A++ FWDP Y CF F   DL+PTIEEY  ML++ EK  E++Y FNP+ T K            E+QK +KVKG EE+
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFLVVHLKEVQKNVKVKGVEES

Query:  ISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYC
        +  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+DG V+KLFF +E+GV+P IP+LA+T  +LNYC
Subjt:  ISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYC

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]9.2e-5454.95Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HI +LMYIP+N F ++A++ FWDP Y CF F   DL+PTIEEY  ML++ EK  E++Y FNP+ T KR LSKFL  VH  E+QK +K+KG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +++E+ GL LLALCIYG V++PK +GY+DG V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein1.6e-5154.4Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYIP+N F ++A++ F DP Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KR LSKFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+D  V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

A0A5A7T5S7 Girdin-like9.3e-5254.95Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYIP+N F ++A++ F DP Y CF F   +L+PTIEEY  ML++ EK  E++Y FNP+ T KR LSKFL  VH  E+QK +KVKG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+D  V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

A0A5A7T6E2 Girdin-like1.6e-5154.4Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYIP+N F ++A++ F DP Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KR LSKFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+D  V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

A0A5A7UL51 Girdin-like2.4e-4752.91Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFLVVHLKEVQKNVKVKGVEES
        MFSK+Y HIA+LMYI +N F ++A++ FWDP Y CF F   DL+PTIEEY  ML++ EK  E++Y FNP+ T K            E+QK +KVKG EE+
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFLVVHLKEVQKNVKVKGVEES

Query:  ISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYC
        +  DYL ++ + +I+E+ GL LLALCIYG V++PK +GY+DG V+KLFF +E+GV+P IP+LA+T  +LNYC
Subjt:  ISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYC

A0A5A7UWQ6 Uncharacterized protein4.4e-5454.95Show/hide
Query:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE
        MFSK+Y HI +LMYIP+N F ++A++ FWDP Y CF F   DL+PTIEEY  ML++ EK  E++Y FNP+ T KR LSKFL  VH  E+QK +K+KG EE
Subjt:  MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFL-VVHLKEVQKNVKVKGVEE

Query:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN
        ++  DYL ++ + +++E+ GL LLALCIYG V++PK +GY+DG V+KLFF +E+GV+P IP+LAET  +LNYC       LN
Subjt:  SISADYLTELARKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCAAAGAGATACGACCATATTGCAGACCTCATGTATATTCCGATTAACCAGTTCACCATCCAGGCTTTATTAGAATTCTGGGACCCGACCTACAGGTGTTTCGC
ATTCCAAGATTTTGACTTGGTACCGACCATTGAGGAGTACCACACGATGCTGAATATTGAAGAAAAGGGTGGAGAGATGATCTACTGTTTCAACCCACAGCTAACTGCGA
AAAGAGCTTTATCCAAATTTCTAGTTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTATCTAACAGAACTTGCT
CGCAAACACATAAATGAAGAAAATGGTCTTGTTCTGTTAGCTCTGTGCATCTATGGGATGGTCTTGTATCCCAAAGTAAAAGGATATTTGGATGGCGATGTCTTGAAGCT
CTTCTTTAGCATTGAGCAAGGGGTGGACCCAGCCATACCTCTTCTAGCGGAAACGGTTTGGGCGCTCAATTATTGCACATTGGATGCCCCTAAAAGCCTTAATCTACAGA
TGCAGGAGCTTCCACACAGTTCCTCTAGTAGGCTCTTGGGGATGGGTCCATTATGCTCCATTGTTGGCCTTGCGGCAAAGTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCAAAGAGATACGACCATATTGCAGACCTCATGTATATTCCGATTAACCAGTTCACCATCCAGGCTTTATTAGAATTCTGGGACCCGACCTACAGGTGTTTCGC
ATTCCAAGATTTTGACTTGGTACCGACCATTGAGGAGTACCACACGATGCTGAATATTGAAGAAAAGGGTGGAGAGATGATCTACTGTTTCAACCCACAGCTAACTGCGA
AAAGAGCTTTATCCAAATTTCTAGTTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTATCTAACAGAACTTGCT
CGCAAACACATAAATGAAGAAAATGGTCTTGTTCTGTTAGCTCTGTGCATCTATGGGATGGTCTTGTATCCCAAAGTAAAAGGATATTTGGATGGCGATGTCTTGAAGCT
CTTCTTTAGCATTGAGCAAGGGGTGGACCCAGCCATACCTCTTCTAGCGGAAACGGTTTGGGCGCTCAATTATTGCACATTGGATGCCCCTAAAAGCCTTAATCTACAGA
TGCAGGAGCTTCCACACAGTTCCTCTAGTAGGCTCTTGGGGATGGGTCCATTATGCTCCATTGTTGGCCTTGCGGCAAAGTTGGTTTAA
Protein sequenceShow/hide protein sequence
MFSKRYDHIADLMYIPINQFTIQALLEFWDPTYRCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRALSKFLVVHLKEVQKNVKVKGVEESISADYLTELA
RKHINEENGLVLLALCIYGMVLYPKVKGYLDGDVLKLFFSIEQGVDPAIPLLAETVWALNYCTLDAPKSLNLQMQELPHSSSSRLLGMGPLCSIVGLAAKLV