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Lag0035798 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035798
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:30453379..30453995
RNA-Seq ExpressionLag0035798
SyntenyLag0035798
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7819670.1 uncharacterized protein G2W53_025125 [Senna tora]1.7e-1036.84Show/hide
Query:  REGMNPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFV
        REGM P  +G    N  G  ++ + +       VD LEALA+   L LA+ M    +EVE DS +V  LL  + +D S LG++ E+I  +   F F SF 
Subjt:  REGMNPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFV

Query:  WGRRSANKVAHELGRTTLELGREG----TWLEE
        W RR  NK+AH L    +E   +      WLE+
Subjt:  WGRRSANKVAHELGRTTLELGREG----TWLEE

XP_023887146.1 uncharacterized protein LOC111999255 [Quercus suber]1.2e-1133.81Show/hide
Query:  MNPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGR
        ++  GLG    N+ G VM     L+P    V+++E LA R+ L  A+E+GF  + VE DS  VI  L +     S++G + +++K +       SF   R
Subjt:  MNPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGR

Query:  RSANKVAHELGRTTLELGREGTWLEEVLAEVERAYCSEV
        R  N+VAH L R         +W+E+V   VE  Y SE+
Subjt:  RSANKVAHELGRTTLELGREGTWLEEVLAEVERAYCSEV

XP_023914298.1 uncharacterized protein LOC112025844 [Quercus suber]3.4e-1135.04Show/hide
Query:  GLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRRSAN
        GLG    NEKG VM    + +P    V+++E LA R+ + LARE+ F R+ VE DS  +I+ L       S+ G +  +I      F   SF   RR  N
Subjt:  GLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRRSAN

Query:  KVAHELGRTTLELGREGTWLEEVLAEVERAYCSEVLD
        K+AH L R          W+E+V  ++   Y SE+L+
Subjt:  KVAHELGRTTLELGREGTWLEEVLAEVERAYCSEVLD

XP_023920779.1 uncharacterized protein LOC112032247 [Quercus suber]2.9e-1037.5Show/hide
Query:  ELSREGMNPGGLGNEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVW
        ELS  G+    + N+ GEVM  +    P V +  + E LA R  +  ARE GFT L VE D+  V+  L +   D S LG + ++IK + R F   SF +
Subjt:  ELSREGMNPGGLGNEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVW

Query:  GRRSANKVAHELGRTTLELGREGTWLEE
         RR+AN VAH L R    +  +  W+E+
Subjt:  GRRSANKVAHELGRTTLELGREGTWLEE

XP_023928118.1 uncharacterized protein LOC112039474 [Quercus suber]1.7e-1037.39Show/hide
Query:  NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRRSANKVAHELG
        NE GEVM T+   VP V +  + E +A R  +  A + GFT L VE D+  V+  L +  +D+S LG + ++IK + R F   SF + RR+AN VA+ L 
Subjt:  NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRRSANKVAHELG

Query:  RTTLELGREGTWLEE
        R   ++  +  W+E+
Subjt:  RTTLELGREGTWLEE

TrEMBL top hitse value%identityAlignment
A0A2N9EXU0 Reverse transcriptase domain-containing protein7.0e-1033.85Show/hide
Query:  NPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRR
        N GGLG    N+ G+V+ T+ + +     +++ EALA R  +  A+E+G T +E E D+  VI  LRS     S  G++ E+ K M+ +F   S    RR
Subjt:  NPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRR

Query:  SANKVAHELGRTTLELGREGTWLEEVLAEV
        S N VAH L R   +      W+E++  ++
Subjt:  SANKVAHELGRTTLELGREGTWLEEVLAEV

A0A2N9FY90 RNase H domain-containing protein1.2e-0933.08Show/hide
Query:  NPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRR
        N GG+G    NE G  M+ + + +P+     ++EALA+R  L LA EMGF  + +E DS  V+       + +S+ G +  +++ +  +   C F   RR
Subjt:  NPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRR

Query:  SANKVAHELGRTTLELGREGTWLEEVLAEV
         AN+VAH L R    +    TW+E V  E+
Subjt:  SANKVAHELGRTTLELGREGTWLEEVLAEV

A0A2N9G0G1 Uncharacterized protein5.3e-1028.48Show/hide
Query:  LSNFELSREG-----MNPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIK
        +S F+++ +G      N  G+G    N +GEVM  + + +P+   V+ +EA A R+ +  A++ GFT +++E DST ++  ++      +  G L E+I+
Subjt:  LSNFELSREG-----MNPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIK

Query:  HMVREFMFCSFVWGRRSANKVAHELGRTTLELGREGTWLEEVLAEVERAYC
        H+ R      F+  +R  N +AH L +         TW+E V  E+    C
Subjt:  HMVREFMFCSFVWGRRSANKVAHELGRTTLELGREGTWLEEVLAEVERAYC

A0A2N9GPD6 RNase H domain-containing protein1.2e-0932.37Show/hide
Query:  NPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRR
        N GG+G    +  G+V+ T+ + V     V+++EALA R  +  ARE+G   +EVE D+  +I  L S     +  G++ E+ K ++++    S    RR
Subjt:  NPGGLG----NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRR

Query:  SANKVAHELGRTTLELGREGTWLEEVLAEVERAYCSEVL
        S N VAH L R          WLEEV  ++     S++L
Subjt:  SANKVAHELGRTTLELGREGTWLEEVLAEVERAYCSEVL

A0A7J9B6E6 RNase H domain-containing protein7.0e-1038.21Show/hide
Query:  NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRRSANKVAHELG
        NE GE++         V +  I EA      +  A+E+GF  + VE DS  VI  L +  SD S LG++ ++IK  VR F   +F +  RSAN  AH L 
Subjt:  NEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFCSFVWGRRSANKVAHELG

Query:  RTTLELGREGTWLEEVLAEVERA
        R+   L     W+EE  +EVERA
Subjt:  RTTLELGREGTWLEEVLAEVERA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGTGGGGATGGGTTTCAGAGTATTTTGTCCAATTTCGAGCTTTCTAGGGAAGGAATGAATCCAGGAGGGCTAGGAAATGAGAAAGGAGAAGTGATGCTTACTAT
AGAGAGGTTGGTTCCGTTTGTGCAAGAGGTGGACATCCTTGAAGCGTTGGCGATTCGGAACCGCCTAGGCCTCGCGAGGGAGATGGGATTCACGAGGTTGGAGGTGGAAT
CTGATTCGACTCGGGTAATTTCTTTACTTCGATCGGAGGCGAGTGATATATCAAATCTTGGAGTGCTATCAGAGGAGATTAAGCATATGGTGAGGGAATTTATGTTTTGT
TCCTTCGTGTGGGGTAGGAGATCTGCGAACAAGGTGGCCCATGAGTTGGGGAGGACGACGTTGGAGTTGGGGCGTGAAGGTACCTGGCTGGAGGAAGTTCTGGCAGAAGT
CGAGAGGGCGTATTGCTCTGAGGTTTTGGACAACCCATCTGTGTTGTCGGGAGAGGTTCGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGTGGGGATGGGTTTCAGAGTATTTTGTCCAATTTCGAGCTTTCTAGGGAAGGAATGAATCCAGGAGGGCTAGGAAATGAGAAAGGAGAAGTGATGCTTACTAT
AGAGAGGTTGGTTCCGTTTGTGCAAGAGGTGGACATCCTTGAAGCGTTGGCGATTCGGAACCGCCTAGGCCTCGCGAGGGAGATGGGATTCACGAGGTTGGAGGTGGAAT
CTGATTCGACTCGGGTAATTTCTTTACTTCGATCGGAGGCGAGTGATATATCAAATCTTGGAGTGCTATCAGAGGAGATTAAGCATATGGTGAGGGAATTTATGTTTTGT
TCCTTCGTGTGGGGTAGGAGATCTGCGAACAAGGTGGCCCATGAGTTGGGGAGGACGACGTTGGAGTTGGGGCGTGAAGGTACCTGGCTGGAGGAAGTTCTGGCAGAAGT
CGAGAGGGCGTATTGCTCTGAGGTTTTGGACAACCCATCTGTGTTGTCGGGAGAGGTTCGTTCTTAG
Protein sequenceShow/hide protein sequence
MGGGDGFQSILSNFELSREGMNPGGLGNEKGEVMLTIERLVPFVQEVDILEALAIRNRLGLAREMGFTRLEVESDSTRVISLLRSEASDISNLGVLSEEIKHMVREFMFC
SFVWGRRSANKVAHELGRTTLELGREGTWLEEVLAEVERAYCSEVLDNPSVLSGEVRS