; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035805 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035805
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr3:30691788..30692753
RNA-Seq ExpressionLag0035805
SyntenyLag0035805
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]8.3e-0635Show/hide
Query:  LRRDFLFERGFSDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD
        + R F++ RG     P F+ + IA H W  FC  P      +V++FYAN +  E     +RG  + ++  AINSL+ L D
Subjt:  LRRDFLFERGFSDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD

GAU10484.1 hypothetical protein TSUD_417910 [Trifolium subterraneum]8.3e-0630.39Show/hide
Query:  RFINNLARAKYVEMLRRDFLFERGFSDDLPRF---LTTRIANHGWSQFCA-----KPKPVNSNIVQEFYANI------DHQEGFQAIVRGVPVDWSPRAI
        RFI+  A  +Y ++   +F+ E+GFS +L R    +   ++   W +F         KP N+ + +EF+AN       D    ++ +VRG+ +DWSPR +
Subjt:  RFINNLARAKYVEMLRRDFLFERGFSDDLPRF---LTTRIANHGWSQFCA-----KPKPVNSNIVQEFYANI------DHQEGFQAIVRGVPVDWSPRAI

Query:  NS
        N+
Subjt:  NS

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]4.4e-0733.67Show/hide
Query:  FINNLARAKYVEMLRRDFLFERGF------SDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ
        F++  A+  Y  +  R   FE GF      + +L   +   +  H W +F   P PVN+ IV+EFY+NI        +VRG+ + ++P AIN  F LQ
Subjt:  FINNLARAKYVEMLRRDFLFERGF------SDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]1.1e-0535.79Show/hide
Query:  ARAKYVEMLR-RDFLFERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD
        A  +Y E ++ R    E+GF  D       P F+   I  H W  FCA P+ + + +V+EFYAN+ + +     VRGV V  S  AIN+++ L D
Subjt:  ARAKYVEMLR-RDFLFERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]2.9e-0636.63Show/hide
Query:  RFINNLARAKYVEMLRRDFL-FERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ
        +F +  A A+Y E ++   L  E+GF+ +       P F+   I  H W  FCA  +     +V+EFYAN+   E     V+GV V WS  AIN+LF L 
Subjt:  RFINNLARAKYVEMLRRDFL-FERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A1B5Z8P6 Uncharacterized protein4.0e-0630.39Show/hide
Query:  RFINNLARAKYVEMLRRDFLFERGFSDDLPRF---LTTRIANHGWSQFCA-----KPKPVNSNIVQEFYANI------DHQEGFQAIVRGVPVDWSPRAI
        RFI+  A  +Y ++   +F+ E+GFS +L R    +   ++   W +F         KP N+ + +EF+AN       D    ++ +VRG+ +DWSPR +
Subjt:  RFINNLARAKYVEMLRRDFLFERGFSDDLPRF---LTTRIANHGWSQFCA-----KPKPVNSNIVQEFYANI------DHQEGFQAIVRGVPVDWSPRAI

Query:  NS
        N+
Subjt:  NS

A0A2P5B0K0 Uncharacterized protein5.3e-0635.79Show/hide
Query:  ARAKYVEMLR-RDFLFERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD
        A  +Y E ++ R    E+GF  D       P F+   I  H W  FCA P+ + + +V+EFYAN+ + +     VRGV V  S  AIN+++ L D
Subjt:  ARAKYVEMLR-RDFLFERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD

A0A2P5EYL5 Uncharacterized protein1.4e-0636.63Show/hide
Query:  RFINNLARAKYVEMLRRDFL-FERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ
        +F +  A A+Y E ++   L  E+GF+ +       P F+   I  H W  FCA  +     +V+EFYAN+   E     V+GV V WS  AIN+LF L 
Subjt:  RFINNLARAKYVEMLRRDFL-FERGFSDD------LPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ

Query:  D
        D
Subjt:  D

A0A6A2ZUE4 Uncharacterized protein2.1e-0733.67Show/hide
Query:  FINNLARAKYVEMLRRDFLFERGF------SDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ
        F++  A+  Y  +  R   FE GF      + +L   +   +  H W +F   P PVN+ IV+EFY+NI        +VRG+ + ++P AIN  F LQ
Subjt:  FINNLARAKYVEMLRRDFLFERGF------SDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQ

W9R159 Uncharacterized protein4.0e-0635Show/hide
Query:  LRRDFLFERGFSDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD
        + R F++ RG     P F+ + IA H W  FC  P      +V++FYAN +  E     +RG  + ++  AINSL+ L D
Subjt:  LRRDFLFERGFSDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVDWSPRAINSLFILQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACGACAGGAAGTAAGGAAAGGGAAAATGAGGAAGAAGAGGTACCAGTTACTCCTGAGGTACCAAAAATGTTAGCAAAGAAAAAGAAAACACTAGAGGAGAG
GGAAGCCAAGTGGCGAAGAAGGCAACAAAGGGATGAGAATCAAGAAATTGTACAGAAGGTAGTGGGAGATATTGCTGCCGAGGAAAAAGGTAACGAGCAGGAGGTGCAAG
AGCAAGAGGCTCGAGTCGAGGTTATTATGCCAGAGGTGCCCCGTCATCGCCGTCGGAAGCAGAAAGTCGGTCGAGTCAAGGTGGTCCGGACTGAGGAAGAAATTTTGCCC
AAACAAAGGGAAGACAAGGGCAAAGGTATTGTTGAAGCATCCCAGGAACCTGAAGATTGTGAAACAGAGGAGCCACGGTTGTCGTATAACCGCTTCATCAACAATCTTGC
TCGAGCAAAGTATGTCGAGATGCTGAGAAGAGACTTCTTGTTTGAACGCGGGTTTAGTGATGATCTGCCACGTTTCTTGACAACCAGGATAGCAAACCATGGCTGGAGTC
AGTTCTGTGCAAAGCCGAAACCGGTCAATTCCAACATTGTTCAAGAGTTTTATGCAAACATTGATCATCAAGAAGGATTTCAGGCTATCGTTCGAGGGGTGCCTGTTGAT
TGGAGCCCAAGAGCTATAAATTCTTTATTCATCCTCCAAGACTTTCCGCACGCAGACTTCAATGGTGGTGGCGCCATCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACGACAGGAAGTAAGGAAAGGGAAAATGAGGAAGAAGAGGTACCAGTTACTCCTGAGGTACCAAAAATGTTAGCAAAGAAAAAGAAAACACTAGAGGAGAG
GGAAGCCAAGTGGCGAAGAAGGCAACAAAGGGATGAGAATCAAGAAATTGTACAGAAGGTAGTGGGAGATATTGCTGCCGAGGAAAAAGGTAACGAGCAGGAGGTGCAAG
AGCAAGAGGCTCGAGTCGAGGTTATTATGCCAGAGGTGCCCCGTCATCGCCGTCGGAAGCAGAAAGTCGGTCGAGTCAAGGTGGTCCGGACTGAGGAAGAAATTTTGCCC
AAACAAAGGGAAGACAAGGGCAAAGGTATTGTTGAAGCATCCCAGGAACCTGAAGATTGTGAAACAGAGGAGCCACGGTTGTCGTATAACCGCTTCATCAACAATCTTGC
TCGAGCAAAGTATGTCGAGATGCTGAGAAGAGACTTCTTGTTTGAACGCGGGTTTAGTGATGATCTGCCACGTTTCTTGACAACCAGGATAGCAAACCATGGCTGGAGTC
AGTTCTGTGCAAAGCCGAAACCGGTCAATTCCAACATTGTTCAAGAGTTTTATGCAAACATTGATCATCAAGAAGGATTTCAGGCTATCGTTCGAGGGGTGCCTGTTGAT
TGGAGCCCAAGAGCTATAAATTCTTTATTCATCCTCCAAGACTTTCCGCACGCAGACTTCAATGGTGGTGGCGCCATCAAATGA
Protein sequenceShow/hide protein sequence
MAKTTGSKERENEEEEVPVTPEVPKMLAKKKKTLEEREAKWRRRQQRDENQEIVQKVVGDIAAEEKGNEQEVQEQEARVEVIMPEVPRHRRRKQKVGRVKVVRTEEEILP
KQREDKGKGIVEASQEPEDCETEEPRLSYNRFINNLARAKYVEMLRRDFLFERGFSDDLPRFLTTRIANHGWSQFCAKPKPVNSNIVQEFYANIDHQEGFQAIVRGVPVD
WSPRAINSLFILQDFPHADFNGGGAIK