; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035808 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035808
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:30788504..30789004
RNA-Seq ExpressionLag0035808
SyntenyLag0035808
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382389.1 uncharacterized protein LOC107175483 [Citrus sinensis]4.7e-2131.58Show/hide
Query:  ENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFDK
        + L+ R +   L E+E   +  +        +    CL +K++ ++ VN D  R  M+  WK  +  ++E  GDN+F  KF T+ +K R++   PW FDK
Subjt:  ENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFDK

Query:  ALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
        AL+VL  P    SI    F+   FW+++H +P+ CM  E  + LG      EEV+ D E    GP   +++
Subjt:  ALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]7.0e-3341.28Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+ + +    +K T  EN T+     K   +    +LC+  K+ TSKR++++A RSVMKSVW+VH +TR EP G N++ I F +  EK R++ + PWTF+
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
        K+LLVL SP        + F+   FWI++HN+P  C++ EMA ILG      EE++ DG   W GP +R+RV
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.2e-2939.53Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+ + E    + LT+++  TI     K   + +  +     K+ TSKR++ +AFRSVMKS+WKVH++T IE AG N++ I F +  EK R++ + PW+F+
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
         +LLVL SP   +    + F+    WI++H +P  CM  +MAK LG      EE+DC+G   WTGP +R+RV
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]7.0e-2537.79Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+++ +    + L ++E  TI   + K   +    +LC   K+  SKR+  +AF SVMK VWK+H +TRIE AG N++ I F T  EK+R+    PWTFD
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
        K+LL+L           I  S   FW+++H +   CMT +MAK LG      EEVD      W  P + +RV
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.7e-2438.26Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+ + E    + LT +E  T    + +   + +  +LC   K+ TSKR+++ A  SVMK VWK+H++TRIE AG N++ I F T +EK R++ + PWTFD
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGEEV
        K+L VL SP   +    + F    FW+++H +P   +T +MAK+LG+ +
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGEEV

TrEMBL top hitse value%identityAlignment
A0A5C7IW83 CCHC-type domain-containing protein3.0e-2130.63Show/hide
Query:  LTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFDKALLVLASPKEN
        + E++   +E  ++++    K+ + CL  KV+T K+VN +AFRS+++ +W       +E   DN+F   F  + ++ R+ +  PW F K+L+VL  PK  
Subjt:  LTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFDKALLVLASPKEN

Query:  ESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGE------EVDCDGEKYWTGPMMRIRV
         +   + F++  FW+++H+ P+ CM   MAK + E      E+  D ++ W G  MR++V
Subjt:  ESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGE------EVDCDGEKYWTGPMMRIRV

A0A6J1D765 uncharacterized protein LOC1110179023.4e-3341.28Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+ + +    +K T  EN T+     K   +    +LC+  K+ TSKR++++A RSVMKSVW+VH +TR EP G N++ I F +  EK R++ + PWTF+
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
        K+LLVL SP        + F+   FWI++HN+P  C++ EMA ILG      EE++ DG   W GP +R+RV
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

A0A6J1DP89 uncharacterized protein LOC1110229326.0e-3039.53Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+ + E    + LT+++  TI     K   + +  +     K+ TSKR++ +AFRSVMKS+WKVH++T IE AG N++ I F +  EK R++ + PW+F+
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
         +LLVL SP   +    + F+    WI++H +P  CM  +MAK LG      EE+DC+G   WTGP +R+RV
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

A0A6J1DVS4 uncharacterized protein LOC1110235553.4e-2537.79Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+++ +    + L ++E  TI   + K   +    +LC   K+  SKR+  +AF SVMK VWK+H +TRIE AG N++ I F T  EK+R+    PWTFD
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV
        K+LL+L           I  S   FW+++H +   CMT +MAK LG      EEVD      W  P + +RV
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILG------EEVDCDGEKYWTGPMMRIRV

A0A6J1DYG3 uncharacterized protein LOC1110246761.3e-2438.26Show/hide
Query:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD
        M+ + E    + LT +E  T    + +   + +  +LC   K+ TSKR+++ A  SVMK VWK+H++TRIE AG N++ I F T +EK R++ + PWTFD
Subjt:  MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFD

Query:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGEEV
        K+L VL SP   +    + F    FW+++H +P   +T +MAK+LG+ +
Subjt:  KALLVLASPKENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCTGGTTGAACGATTGAGGCAATGGAAATTGACGGAAAAGGAAAATCGAACAATTGAGGCGGTGGACAGTAAGGTCTTCTTCTCGACGAAAGAAACTGAATT
ATGCCTTGCAACGAAAGTGATCACAAGCAAGAGAGTCAACAGTGATGCATTTAGATCAGTCATGAAATCAGTTTGGAAGGTGCATCAGAATACTAGAATTGAGCCGGCAG
GTGATAATGTGTTCTGCATTAAATTCAATACTAAGATGGAAAAAATGAGGATAATGAAGACGAGTCCATGGACATTTGACAAGGCATTACTTGTGTTGGCCTCCCCAAAA
GAGAATGAATCGATAGGGTCAATTGTCTTCAGTGAGGAAGGCTTTTGGATCAAACTTCATAATGTTCCCGTGAATTGTATGACTGTGGAGATGGCTAAAATTTTGGGGGA
GGAAGTGGACTGTGATGGGGAGAAATATTGGACGGGGCCAATGATGAGAATTAGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATCTGGTTGAACGATTGAGGCAATGGAAATTGACGGAAAAGGAAAATCGAACAATTGAGGCGGTGGACAGTAAGGTCTTCTTCTCGACGAAAGAAACTGAATT
ATGCCTTGCAACGAAAGTGATCACAAGCAAGAGAGTCAACAGTGATGCATTTAGATCAGTCATGAAATCAGTTTGGAAGGTGCATCAGAATACTAGAATTGAGCCGGCAG
GTGATAATGTGTTCTGCATTAAATTCAATACTAAGATGGAAAAAATGAGGATAATGAAGACGAGTCCATGGACATTTGACAAGGCATTACTTGTGTTGGCCTCCCCAAAA
GAGAATGAATCGATAGGGTCAATTGTCTTCAGTGAGGAAGGCTTTTGGATCAAACTTCATAATGTTCCCGTGAATTGTATGACTGTGGAGATGGCTAAAATTTTGGGGGA
GGAAGTGGACTGTGATGGGGAGAAATATTGGACGGGGCCAATGATGAGAATTAGGGTGTAA
Protein sequenceShow/hide protein sequence
MENLVERLRQWKLTEKENRTIEAVDSKVFFSTKETELCLATKVITSKRVNSDAFRSVMKSVWKVHQNTRIEPAGDNVFCIKFNTKMEKMRIMKTSPWTFDKALLVLASPK
ENESIGSIVFSEEGFWIKLHNVPVNCMTVEMAKILGEEVDCDGEKYWTGPMMRIRV