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Lag0035809 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035809
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationchr3:30819346..30819942
RNA-Seq ExpressionLag0035809
SyntenyLag0035809
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]5.4e-0837.18Show/hide
Query:  LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +ER F++ RG     P F+ + IA H W  FC  P +   Q+VR+FYAN +  +   + +RG  + ++  AIN+LY+L
Subjt:  LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]5.8e-1043.01Show/hide
Query:  SRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +  +Y E ++ R    E+GF GD       P F+   I  H+W+LFCA PE + A +VREFYAN+   D   V VRGV+V  S  AIN +Y L
Subjt:  SRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]2.9e-0940.4Show/hide
Query:  RFANNFSRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +F +  +  +Y E ++ R    E+GF GD       P F+   I  H+W+LFCA PE     +VREFYAN+   D   V VRGV+V  S  AIN +Y L
Subjt:  RFANNFSRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.2e-0833.04Show/hide
Query:  QQLPVDRFANNFSRA-----KYAEL------------LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGV
        +++ ++R A N S+A     K AE+            +E++F+++     + P F+   I  H+W+LFCA PE     +VREFY N+   D   V +RGV
Subjt:  QQLPVDRFANNFSRA-----KYAEL------------LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGV

Query:  EVDWSPSAINALYNL
        +V  S  AIN +++L
Subjt:  EVDWSPSAINALYNL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.2e-0737.37Show/hide
Query:  RFANNFSRAKYAELLERDFL-FERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +F +  + A+Y E ++   L  E+GF+ +       P F+   I  H+W+LFCA  E     +VREFYAN+   +   V V+GV+V WS  AIN L+ L
Subjt:  RFANNFSRAKYAELLERDFL-FERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein2.8e-1043.01Show/hide
Query:  SRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +  +Y E ++ R    E+GF GD       P F+   I  H+W+LFCA PE + A +VREFYAN+   D   V VRGV+V  S  AIN +Y L
Subjt:  SRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

A0A2P5CXV1 Uncharacterized protein1.4e-0940.4Show/hide
Query:  RFANNFSRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +F +  +  +Y E ++ R    E+GF GD       P F+   I  H+W+LFCA PE     +VREFYAN+   D   V VRGV+V  S  AIN +Y L
Subjt:  RFANNFSRAKYAELLE-RDFLFERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

A0A2P5DAQ2 Uncharacterized protein1.5e-0833.04Show/hide
Query:  QQLPVDRFANNFSRA-----KYAEL------------LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGV
        +++ ++R A N S+A     K AE+            +E++F+++     + P F+   I  H+W+LFCA PE     +VREFY N+   D   V +RGV
Subjt:  QQLPVDRFANNFSRA-----KYAEL------------LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGV

Query:  EVDWSPSAINALYNL
        +V  S  AIN +++L
Subjt:  EVDWSPSAINALYNL

A0A2P5EYL5 Uncharacterized protein5.9e-0837.37Show/hide
Query:  RFANNFSRAKYAELLERDFL-FERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +F +  + A+Y E ++   L  E+GF+ +       P F+   I  H+W+LFCA  E     +VREFYAN+   +   V V+GV+V WS  AIN L+ L
Subjt:  RFANNFSRAKYAELLERDFL-FERGFSGD------LPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

W9R159 Uncharacterized protein2.6e-0837.18Show/hide
Query:  LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL
        +ER F++ RG     P F+ + IA H W  FC  P +   Q+VR+FYAN +  +   + +RG  + ++  AIN+LY+L
Subjt:  LERDFLFERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAACCACCAAAGAGGCGTCGCATTAAGCGGAAGGCAGGCCGCATCAGGGTGATTCGGAATACCCCATCGCCTCCATCATCGGACTCTGAGGAAGAAAGAAGGGA
AAGAGAGAAAAAAGAAGTTGAGAACAAAATGAGAGAAGAAACAGAAAAGAGAGTTGAGGAAGAACAGTTGCTCAAGCGCAGGGCGGAAAAGGGCAAAAACATTGCCGAAG
CATCGGAGGAACACGATGAAATAGAAGAACAACAGTTACCAGTTGATCGCTTCGCCAATAATTTTTCCAGAGCAAAATACGCCGAGCTTCTGGAAAGAGATTTCTTGTTT
GAGCGCGGTTTCAGCGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGACCACGACTGGGAGCTATTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGCG
TGAATTTTATGCAAACATTGACAAAGAGGATTGTTTCCAGGTAATTGTCCGAGGAGTCGAGGTAGATTGGAGTCCGAGTGCTATCAACGCACTGTATAATCTTCAGAACT
TCCCCCATGCGACATATAATGAGATGGCTGTGGCGCCATCTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAACCACCAAAGAGGCGTCGCATTAAGCGGAAGGCAGGCCGCATCAGGGTGATTCGGAATACCCCATCGCCTCCATCATCGGACTCTGAGGAAGAAAGAAGGGA
AAGAGAGAAAAAAGAAGTTGAGAACAAAATGAGAGAAGAAACAGAAAAGAGAGTTGAGGAAGAACAGTTGCTCAAGCGCAGGGCGGAAAAGGGCAAAAACATTGCCGAAG
CATCGGAGGAACACGATGAAATAGAAGAACAACAGTTACCAGTTGATCGCTTCGCCAATAATTTTTCCAGAGCAAAATACGCCGAGCTTCTGGAAAGAGATTTCTTGTTT
GAGCGCGGTTTCAGCGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGACCACGACTGGGAGCTATTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGCG
TGAATTTTATGCAAACATTGACAAAGAGGATTGTTTCCAGGTAATTGTCCGAGGAGTCGAGGTAGATTGGAGTCCGAGTGCTATCAACGCACTGTATAATCTTCAGAACT
TCCCCCATGCGACATATAATGAGATGGCTGTGGCGCCATCTGATTAG
Protein sequenceShow/hide protein sequence
MLEPPKRRRIKRKAGRIRVIRNTPSPPSSDSEEERREREKKEVENKMREETEKRVEEEQLLKRRAEKGKNIAEASEEHDEIEEQQLPVDRFANNFSRAKYAELLERDFLF
ERGFSGDLPQFLRTGIADHDWELFCAKPESVNAQVVREFYANIDKEDCFQVIVRGVEVDWSPSAINALYNLQNFPHATYNEMAVAPSD