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Lag0035820 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035820
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:31166202..31166963
RNA-Seq ExpressionLag0035820
SyntenyLag0035820
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG49522.1 hypothetical protein EZV62_025397 [Acer yangbiense]5.8e-1440.82Show/hide
Query:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDD
        GGPW+FD+ALLVL  P G  D   + F K AFW+    VPL  ++  + R LGS++G V ++   G  + +   +WVRV +++ KPLRR +R+ +  D
Subjt:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDD

TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]7.6e-1433.33Show/hide
Query:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL-------
        GGPW+FD+ALLVL  P G  D   + F K AFW+    VPL  ++  + R LGS++G V ++   G  + +   + VRV +++ KPLRR +R+       
Subjt:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL-------

Query:  ---------RLEDDSISCVQGGNV--------------DMSFPYGDWLRA
                 RL D    C + G+V              D +  +G WLRA
Subjt:  ---------RLEDDSISCVQGGNV--------------DMSFPYGDWLRA

TXG70631.1 hypothetical protein EZV62_005566 [Acer yangbiense]4.4e-1432.54Show/hide
Query:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIR---------
        GPW+FD+ALLVLV P+G  D   + F++ AFWV    VPL  ++  + R +G+++G V ++   G  +++   + VRV I++N+PLR  +R         
Subjt:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIR---------

Query:  ----LRLEDDSISCVQGGNV-----------------DMSFPYGDWLRA-YPFRLSRGPGMTREVSEFR
            LR E     C + G +                 D +  YG WLRA  P R S   G   E S  R
Subjt:  ----LRLEDDSISCVQGGNV-----------------DMSFPYGDWLRA-YPFRLSRGPGMTREVSEFR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.3e-1836Show/hide
Query:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL--------
        GPWTF+++LLVL SP   + P+ ++F+ CAFW+   N+P + +S  MA  LG+ +G V ++ G G + W    + VRV I+++KPLRRGI+L        
Subjt:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL--------

Query:  -------RLEDDSISCVQGGN-----------VDMSFP--YGDWLRAYPFRLSRGPGMTREVSEFRERGGRRGRG
               +L D    C + G+           V  + P  YGDWLRA   + S    ++    E   RGGR GRG
Subjt:  -------RLEDDSISCVQGGN-----------VDMSFP--YGDWLRAYPFRLSRGPGMTREVSEFRERGGRRGRG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.1e-1642.71Show/hide
Query:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLED
        GPWTFD++LL+LV     + P+ ID S CAFWV    +  + +++ MA+ LG+ +G V +V G+   +W+R  +WVRV I + KPLRRG++++  D
Subjt:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLED

TrEMBL top hitse value%identityAlignment
A0A5C7GW89 DUF4283 domain-containing protein3.7e-1431.82Show/hide
Query:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDDSIS
        GPW FD++L+VL  P+G  D   + F + +FWV F NVPL +++ ++A+    +VG V+++  V  + W    M VRV +++ KPL+RGIR+  +D    
Subjt:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDDSIS

Query:  CVQ-----GGNVDM----------------SFPYGDWLRAYPFRLSRGPGMTRE
         V+      G++ +                   YG WLRA P +  +G    +E
Subjt:  CVQ-----GGNVDM----------------SFPYGDWLRAYPFRLSRGPGMTRE

A0A5C7GYX1 Uncharacterized protein2.8e-1440.82Show/hide
Query:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDD
        GGPW+FD+ALLVL  P G  D   + F K AFW+    VPL  ++  + R LGS++G V ++   G  + +   +WVRV +++ KPLRR +R+ +  D
Subjt:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDD

A0A5C7GZQ4 CCHC-type domain-containing protein3.7e-1433.33Show/hide
Query:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL-------
        GGPW+FD+ALLVL  P G  D   + F K AFW+    VPL  ++  + R LGS++G V ++   G  + +   + VRV +++ KPLRR +R+       
Subjt:  GGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL-------

Query:  ---------RLEDDSISCVQGGNV--------------DMSFPYGDWLRA
                 RL D    C + G+V              D +  +G WLRA
Subjt:  ---------RLEDDSISCVQGGNV--------------DMSFPYGDWLRA

A0A6J1D765 uncharacterized protein LOC1110179026.4e-1936Show/hide
Query:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL--------
        GPWTF+++LLVL SP   + P+ ++F+ CAFW+   N+P + +S  MA  LG+ +G V ++ G G + W    + VRV I+++KPLRRGI+L        
Subjt:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRL--------

Query:  -------RLEDDSISCVQGGN-----------VDMSFP--YGDWLRAYPFRLSRGPGMTREVSEFRERGGRRGRG
               +L D    C + G+           V  + P  YGDWLRA   + S    ++    E   RGGR GRG
Subjt:  -------RLEDDSISCVQGGN-----------VDMSFP--YGDWLRAYPFRLSRGPGMTREVSEFRERGGRRGRG

A0A6J1DVS4 uncharacterized protein LOC1110235551.0e-1642.71Show/hide
Query:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLED
        GPWTFD++LL+LV     + P+ ID S CAFWV    +  + +++ MA+ LG+ +G V +V G+   +W+R  +WVRV I + KPLRRG++++  D
Subjt:  GPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCTCAGGGGAATGATGATCCTGTAGCAATAGATTTCTCAAAATGTGCTTTCTGGGTTAATTT
CTGCAATGTACCTTTGAAATATCTCTCGCGTGCTATGGCTAGGAATCTTGGGAGTGTTGTTGGTACTGTTGTGGATGTGTATGGTGTAGGACAGGAGGAGTGGATAAGAT
CTGTTATGTGGGTTCGTGTTTGTATTGAACTAAATAAACCGTTGAGGCGTGGTATACGACTTCGACTTGAGGATGATTCAATTAGTTGTGTGCAAGGGGGCAATGTGGAT
ATGAGTTTTCCTTATGGTGATTGGCTCAGGGCTTACCCCTTTCGGCTGTCTCGGGGACCTGGGATGACCAGGGAAGTTAGTGAATTTCGAGAGAGAGGAGGTCGTCGTGG
GCGTGGCCGTGGCCGATTTACTAGTGGCTCATCTGTTAATCGTGAGTTTGAAGATGAGTCTGATGCTGAGGATCATGGAGCACTGCTAACCTTTTTGGCTCCGCATTCGG
CTGTGATTGTGTCACAACCGAATGCTACTGATGTAGGGATAAAAGCCCCACGCAATGGAAGACTTATCAGAGATCATACCCTATTAATTATTGATCAGAATATCGTTACG
ACAACAAATAAATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGGCCTTGGACCTTTGATAGAGCTTTGTTGGTCCTTGTGTCGCCTCAGGGGAATGATGATCCTGTAGCAATAGATTTCTCAAAATGTGCTTTCTGGGTTAATTT
CTGCAATGTACCTTTGAAATATCTCTCGCGTGCTATGGCTAGGAATCTTGGGAGTGTTGTTGGTACTGTTGTGGATGTGTATGGTGTAGGACAGGAGGAGTGGATAAGAT
CTGTTATGTGGGTTCGTGTTTGTATTGAACTAAATAAACCGTTGAGGCGTGGTATACGACTTCGACTTGAGGATGATTCAATTAGTTGTGTGCAAGGGGGCAATGTGGAT
ATGAGTTTTCCTTATGGTGATTGGCTCAGGGCTTACCCCTTTCGGCTGTCTCGGGGACCTGGGATGACCAGGGAAGTTAGTGAATTTCGAGAGAGAGGAGGTCGTCGTGG
GCGTGGCCGTGGCCGATTTACTAGTGGCTCATCTGTTAATCGTGAGTTTGAAGATGAGTCTGATGCTGAGGATCATGGAGCACTGCTAACCTTTTTGGCTCCGCATTCGG
CTGTGATTGTGTCACAACCGAATGCTACTGATGTAGGGATAAAAGCCCCACGCAATGGAAGACTTATCAGAGATCATACCCTATTAATTATTGATCAGAATATCGTTACG
ACAACAAATAAATTATAG
Protein sequenceShow/hide protein sequence
MGGPWTFDRALLVLVSPQGNDDPVAIDFSKCAFWVNFCNVPLKYLSRAMARNLGSVVGTVVDVYGVGQEEWIRSVMWVRVCIELNKPLRRGIRLRLEDDSISCVQGGNVD
MSFPYGDWLRAYPFRLSRGPGMTREVSEFRERGGRRGRGRGRFTSGSSVNREFEDESDAEDHGALLTFLAPHSAVIVSQPNATDVGIKAPRNGRLIRDHTLLIIDQNIVT
TTNKL