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Lag0035826 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035826
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhloem filament protein
Genome locationchr3:31454218..31454523
RNA-Seq ExpressionLag0035826
SyntenyLag0035826
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041955.1 Phloem filament protein [Cucumis melo var. makuwa]7.1e-1239.33Show/hide
Query:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYREC--EGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF
        W +IPDV +PCVQ V  +AV +HN     HL Y+ T  GWY E       L Y+LH+K  +C+GR+ +   +V+E+  +  ++  LL F
Subjt:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYREC--EGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF

KAG6588755.1 hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1136.96Show/hide
Query:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS
        ++C  +W +IPDV++ CVQ +  FAV  +N       +Y     GW+ E +G+ L +RLH+   DC+GR+  ++V+V E+ T   KV  L S
Subjt:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS

KAG6588757.1 hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1239.13Show/hide
Query:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS
        ++C  +W +IPDV++ CVQ V  FAV  +N       +Y     GW+ E +G+ L YRLHV+  DC+GR+  ++V+V E+ T   K+  L S
Subjt:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS

KAG6588758.1 hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1236.96Show/hide
Query:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS
        ++C  +W +IPDV++ CVQ +  FAV  +N       +Y     GW+ E +G+ L YRLH++  DC+GR+  + V+V E+ T   K+  L S
Subjt:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS

KAG6588759.1 hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1135.87Show/hide
Query:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS
        ++C  +W +IPDV++ CVQ +  FAV  +N       +Y     GW+ E +G+ L +RLH+   DC+GR+  ++V+V E+ T   K+  L S
Subjt:  VVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLS

TrEMBL top hitse value%identityAlignment
A0A0A0K3W6 Phloem filament protein3.8e-1136.78Show/hide
Query:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF
        W +IPDV K CVQ+   +AVT HN+    +L Y  T  GWY E    ++ ++LH+K  +C+GR+ +   +V+E+  +  K+  L  F
Subjt:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF

A0A5D3D2J2 Phloem filament protein3.4e-1239.33Show/hide
Query:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYREC--EGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF
        W +IPDV +PCVQ V  +AV +HN     HL Y+ T  GWY E       L Y+LH+K  +C+GR+ +   +V+E+  +  ++  LL F
Subjt:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYREC--EGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF

A0A6J1EI90 uncharacterized protein LOC1114345927.9e-0936.73Show/hide
Query:  EVVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSFTRIV
        +V  + +W +IPDV+  CVQEV   AV + N    H L+Y   + GWY E   + L YRLH++  D + R L  E +V E+     ++  L+SF  I+
Subjt:  EVVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSFTRIV

A0A6J1EIQ8 uncharacterized protein LOC1114345179.3e-1039.13Show/hide
Query:  EWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSFTRIV
        +W +IP V +PCVQ V +FAV   N  + + L++   Y GWY E   + L YRLH+K  D + R LN E +V E      +V  L+S   +V
Subjt:  EWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSFTRIV

A0A6J1ELQ9 uncharacterized protein LOC1114345157.9e-0934.44Show/hide
Query:  DPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF
        + +W +IP+V  P VQE+  FAV  HN      L+Y++ Y GW+ +   D + +RLH+K  D +GR+ + E +V  ++    ++  L SF
Subjt:  DPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G47550.1 Cystatin/monellin superfamily protein7.6e-0435.21Show/hide
Query:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIV
        W+ I +VT P V E+G+FAV+ +N+     L++    +G  +   G   +YRL V  ND  G   N   IV
Subjt:  WTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATGAGGTGGTTTGCGATCCAGAGTGGACAGAAATCCCTGACGTAACTAAGCCTTGCGTGCAAGAGGTTGGAGATTTTGCTGTTACACGACACAACGAAACTTT
TCCACATCATCTACAATACATCGACACTTATGCTGGCTGGTATCGAGAGTGTGAGGGAGACATCCTAGACTATCGTCTCCATGTTAAGACGAACGACTGTGTGGGACGTT
TGCTAAACATTGAAGTCATCGTTCGCGAACAAAACACTGTCGATGGAAAAGTCTGGGACCTCTTATCCTTCACCAGAATAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATGAGGTGGTTTGCGATCCAGAGTGGACAGAAATCCCTGACGTAACTAAGCCTTGCGTGCAAGAGGTTGGAGATTTTGCTGTTACACGACACAACGAAACTTT
TCCACATCATCTACAATACATCGACACTTATGCTGGCTGGTATCGAGAGTGTGAGGGAGACATCCTAGACTATCGTCTCCATGTTAAGACGAACGACTGTGTGGGACGTT
TGCTAAACATTGAAGTCATCGTTCGCGAACAAAACACTGTCGATGGAAAAGTCTGGGACCTCTTATCCTTCACCAGAATAGTTTAA
Protein sequenceShow/hide protein sequence
MSYEVVCDPEWTEIPDVTKPCVQEVGDFAVTRHNETFPHHLQYIDTYAGWYRECEGDILDYRLHVKTNDCVGRLLNIEVIVREQNTVDGKVWDLLSFTRIV