; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035844 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035844
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:32155457..32155837
RNA-Seq ExpressionLag0035844
SyntenyLag0035844
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2706415.1 hypothetical protein I3760_05G103200 [Carya illinoinensis]1.5e-1943.52Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        +++ L + +N+PW++ GDFNEILDN EK+GG  R  + +REF++ ++ CE+ D GFVG +FTW N      LI +R+DRFL N    +     +V+H V 
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPL
        + SD+ PL
Subjt:  SSSDYRPL

KAG2725981.1 hypothetical protein I3760_01G090600 [Carya illinoinensis]3.0e-2041.27Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        L+R LR + N+PW++ GDFNE+L   EK GG  R E  M+ F+  +D C + D GF G K+TWCN     G++ ER+DRF+  P+ +     F+V H V 
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPLLAEWKEEPSDART-YHHR
        +SSD+ P++      PS A+  Y H+
Subjt:  SSSDYRPLLAEWKEEPSDART-YHHR

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]4.5e-2450Show/hide
Query:  LRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRSSSD
        L    ++PW+LGGDFNEIL N EK  GV R++S M+ F+ ++D C + DPGFVG  FTWC+ H     IWER+DRFLIN  +       ++ HL   +SD
Subjt:  LRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRSSSD

Query:  YRPLLAEW
        +RP+LAEW
Subjt:  YRPLLAEW

XP_038688711.1 uncharacterized protein LOC119987879 [Tripterygium wilfordii]4.4e-1945.95Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        L+R LR   ++PW++ GDFNEILD+ EK GG  R    M EFQ  ++ C++ D G+ G KFTWCNN    G+I+ERIDR + +    N     KV H+V 
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPLLAE
        S SD++P+L +
Subjt:  SSSDYRPLLAE

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]3.9e-2040.48Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        L+R LR++ N+PW++ GDFNE+L  +EK GG  R E  M+ F+  +D C + D GF G K+TWCN     G++ ER+DRF+  P  +    + +V H V 
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPLLAEWKEEPSDA-RTYHHR
        +SSD+ P++      PS A   Y H+
Subjt:  SSSDYRPLLAEWKEEPSDA-RTYHHR

TrEMBL top hitse value%identityAlignment
A0A2N9H1U1 Reverse transcriptase domain-containing protein1.6e-1940.74Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        L++ L +Q ++PW+  GDFNE+L   EK GG  R    M++F+ ++D C   D G+ GP FTWCNN ++ G +WER+DR L      N     ++FHL  
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPL
        ++SD+ P+
Subjt:  SSSDYRPL

A0A2N9I921 Reverse transcriptase domain-containing protein1.2e-1940.74Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        L+R L  Q ++PW  GGDFNEI+   EK G + + ES M  F++++D C   D G++G  FTWCNN  +   +WER+DR + +    +R    +V+HL  
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPL
        + SD++PL
Subjt:  SSSDYRPL

A0A6J1DRA0 uncharacterized protein LOC1110224232.2e-2450Show/hide
Query:  LRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRSSSD
        L    ++PW+LGGDFNEIL N EK  GV R++S M+ F+ ++D C + DPGFVG  FTWC+ H     IWER+DRFLIN  +       ++ HL   +SD
Subjt:  LRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRSSSD

Query:  YRPLLAEW
        +RP+LAEW
Subjt:  YRPLLAEW

A0A7N2KQ83 Uncharacterized protein1.2e-1944.04Show/hide
Query:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR
        L+R L  + ++PW+ GGDFNE+L + EK GG  R    MR+F +++D C +FD GFVG KFTW   H + G++WER+DR +      N     KV  LV 
Subjt:  LMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVR

Query:  SSSDYRPLL
        +SSD+ P++
Subjt:  SSSDYRPLL

M0ZWW4 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H1.6e-1943.64Show/hide
Query:  MRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRS
        ++ + + I  PW + GDFN +LD  EK GG  ++ +   +F   MDACE+ D GF GPKFTWCNN I    IW+R+DR  IN           V HL ++
Subjt:  MRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRS

Query:  SSDYRPLLAE
         SD+RPLL +
Subjt:  SSDYRPLLAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATGAGGTGCCTACGAAAACAGATCAATGTGCCGTGGGTCTTGGGAGGAGACTTCAATGAGATCTTGGATAATAGAGAAAAATGGGGTGGCGTTGACAGGCAGGA
GTCGACAATGAGGGAGTTTCAAAAGTCTATGGATGCTTGTGAGGTTTTTGATCCTGGGTTTGTTGGACCAAAGTTTACATGGTGTAATAACCATATTAACCATGGTCTTA
TTTGGGAGAGAATTGATCGGTTCCTCATTAACCCGACTATGCAGAACCGGTGTAGCATGTTTAAGGTGTTTCACCTTGTGAGGAGCTCGTCGGATTATAGACCGCTACTG
GCAGAATGGAAAGAAGAGCCATCTGATGCAAGAACCTACCATCACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATGAGGTGCCTACGAAAACAGATCAATGTGCCGTGGGTCTTGGGAGGAGACTTCAATGAGATCTTGGATAATAGAGAAAAATGGGGTGGCGTTGACAGGCAGGA
GTCGACAATGAGGGAGTTTCAAAAGTCTATGGATGCTTGTGAGGTTTTTGATCCTGGGTTTGTTGGACCAAAGTTTACATGGTGTAATAACCATATTAACCATGGTCTTA
TTTGGGAGAGAATTGATCGGTTCCTCATTAACCCGACTATGCAGAACCGGTGTAGCATGTTTAAGGTGTTTCACCTTGTGAGGAGCTCGTCGGATTATAGACCGCTACTG
GCAGAATGGAAAGAAGAGCCATCTGATGCAAGAACCTACCATCACAGATGA
Protein sequenceShow/hide protein sequence
MLMRCLRKQINVPWVLGGDFNEILDNREKWGGVDRQESTMREFQKSMDACEVFDPGFVGPKFTWCNNHINHGLIWERIDRFLINPTMQNRCSMFKVFHLVRSSSDYRPLL
AEWKEEPSDARTYHHR