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Lag0035851 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035851
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:32188273..32188839
RNA-Seq ExpressionLag0035851
SyntenyLag0035851
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1042.16Show/hide
Query:  KLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVD
        KLN+ ASWSE    GG+ W IHDS+GS I   CK++ + W +K LE KA IEGLK Y    + V    +P + +E     +   +N    D  EL   VD
Subjt:  KLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVD

Query:  EI
        EI
Subjt:  EI

PRQ38614.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis]8.8e-0828.89Show/hide
Query:  MAILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSS---------HSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIH
        + ++LLW+IW  RN    + +   +++   Q+              NF   L+S +S            W PP +G  K N + ++++   CGG+G  I 
Subjt:  MAILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSS---------HSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIH

Query:  DSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEI
        DS GS++G  C KIS + +   +EA A   G +A E + +F    +  P+V ESD + +V A     ED +  G  V++I
Subjt:  DSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEI

XP_015388376.1 uncharacterized protein LOC102612209 [Citrus sinensis]4.0e-0827.13Show/hide
Query:  ILLLWNIWNTRN--INNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGA
        I + W IW  RN  I     + P +  AR    +  E     K +N     +   +S   W+PP  G +K+N +A+        GLG  I +S G +I A
Subjt:  ILLLWNIWNTRN--INNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGA

Query:  GCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR
          K++S    + C+EA+A + G++  ++++         P+++ESDS +VV  V       TE+   V+EI +   +    S+    R
Subjt:  GCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.5e-1030.46Show/hide
Query:  AILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAK------------LESLSSHS-QWEPPEAGVWKLNTNASWSEIEECGGLGW
        ++++ W IW +RN +    +  D  +  R I + F +  +DK     Q +             E+L+    +W  P    WKLNT+ASWSE  E GG+GW
Subjt:  AILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAK------------LESLSSHS-QWEPPEAGVWKLNTNASWSEIEECGGLGW

Query:  AIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDAT
         + D  G ++ AG  KI +   I  LE    I GL+       F+  + + P+ +ESDSV+V+  + +   D T
Subjt:  AIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDAT

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.1e-1331.32Show/hide
Query:  WNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKIS
        W IWN RN      +    +   +Q+   F  +   + + +     ++L++  +WEPP   +W LN +ASWS+    GG+GW I    G ++ AG + + 
Subjt:  WNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKIS

Query:  KMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR
           N+K LEA A +EGL+        +G  R  PL +E+DS +V + +NR  ED T+ G  V+EI   R S  + + +   R
Subjt:  KMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR

TrEMBL top hitse value%identityAlignment
A0A2P6QWT3 Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein4.3e-0828.89Show/hide
Query:  MAILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSS---------HSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIH
        + ++LLW+IW  RN    + +   +++   Q+              NF   L+S +S            W PP +G  K N + ++++   CGG+G  I 
Subjt:  MAILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSS---------HSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIH

Query:  DSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEI
        DS GS++G  C KIS + +   +EA A   G +A E + +F    +  P+V ESD + +V A     ED +  G  V++I
Subjt:  DSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEI

A0A5B7BU49 RNase H domain-containing protein (Fragment)1.1e-0838.26Show/hide
Query:  WEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASED
        W PP  G++KLN +ASW   E CGG+G  I D  G +IG   K+I     I   EA A + GL   ++    VG +    L VE D + V+ A+  + ED
Subjt:  WEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASED

Query:  ATELGLFVDEIDRFR
         +ELG   D I + R
Subjt:  ATELGLFVDEIDRFR

A0A5D3E6P6 RNase H domain-containing protein5.6e-0838.16Show/hide
Query:  ESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEE
        ES  S   W  P  G W+ N +ASW+++EE  G  W + DS G+ I A C++    W ++ LEA A+  GL  Y +
Subjt:  ESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEE

A0A6J1CQG0 uncharacterized protein LOC1110132167.0e-1130.46Show/hide
Query:  AILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAK------------LESLSSHS-QWEPPEAGVWKLNTNASWSEIEECGGLGW
        ++++ W IW +RN +    +  D  +  R I + F +  +DK     Q +             E+L+    +W  P    WKLNT+ASWSE  E GG+GW
Subjt:  AILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAK------------LESLSSHS-QWEPPEAGVWKLNTNASWSEIEECGGLGW

Query:  AIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDAT
         + D  G ++ AG  KI +   I  LE    I GL+       F+  + + P+ +ESDSV+V+  + +   D T
Subjt:  AIHDSIGSLIGAGCKKISKMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDAT

A0A6J1DNV9 uncharacterized protein LOC1110224035.2e-1431.32Show/hide
Query:  WNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKIS
        W IWN RN      +    +   +Q+   F  +   + + +     ++L++  +WEPP   +W LN +ASWS+    GG+GW I    G ++ AG + + 
Subjt:  WNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKIS

Query:  KMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR
           N+K LEA A +EGL+        +G  R  PL +E+DS +V + +NR  ED T+ G  V+EI   R S  + + +   R
Subjt:  KMWNIKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTTTACTGTTATGGAACATATGGAATACAAGGAATATCAACAACAACAACAACCAATTGCCTGATATCAACAGAGCAAGAAGACAAATTGCTATCAGTTTTGA
GGATAAGCCTATGGATAAGGACAAGAACAATTTCCAAGCTAAGTTAGAGAGTCTTTCGAGTCACTCACAATGGGAGCCTCCAGAGGCCGGCGTCTGGAAGCTAAACACTA
ATGCCTCTTGGTCAGAAATTGAGGAGTGTGGTGGTCTCGGTTGGGCCATTCATGACTCAATTGGATCTCTAATCGGGGCGGGCTGCAAGAAAATTTCAAAGATGTGGAAC
ATAAAATGTCTTGAAGCAAAAGCGAGTATTGAAGGTTTAAAAGCTTACGAGGAAAGCGACGATTTCGTTGGAAGCAGACGCAAGCCACCACTGGTTGTTGAGTCAGACTC
CGTCGATGTTGTGGCAGCTGTTAATCGAGCCTCTGAAGACGCCACAGAGCTTGGCTTGTTCGTGGATGAAATCGACAGATTTAGAGGCTCGGATCGAGTGAAATCCCTCT
CCATATGCTCCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTTTACTGTTATGGAACATATGGAATACAAGGAATATCAACAACAACAACAACCAATTGCCTGATATCAACAGAGCAAGAAGACAAATTGCTATCAGTTTTGA
GGATAAGCCTATGGATAAGGACAAGAACAATTTCCAAGCTAAGTTAGAGAGTCTTTCGAGTCACTCACAATGGGAGCCTCCAGAGGCCGGCGTCTGGAAGCTAAACACTA
ATGCCTCTTGGTCAGAAATTGAGGAGTGTGGTGGTCTCGGTTGGGCCATTCATGACTCAATTGGATCTCTAATCGGGGCGGGCTGCAAGAAAATTTCAAAGATGTGGAAC
ATAAAATGTCTTGAAGCAAAAGCGAGTATTGAAGGTTTAAAAGCTTACGAGGAAAGCGACGATTTCGTTGGAAGCAGACGCAAGCCACCACTGGTTGTTGAGTCAGACTC
CGTCGATGTTGTGGCAGCTGTTAATCGAGCCTCTGAAGACGCCACAGAGCTTGGCTTGTTCGTGGATGAAATCGACAGATTTAGAGGCTCGGATCGAGTGAAATCCCTCT
CCATATGCTCCAGGTAG
Protein sequenceShow/hide protein sequence
MAILLLWNIWNTRNINNNNNQLPDINRARRQIAISFEDKPMDKDKNNFQAKLESLSSHSQWEPPEAGVWKLNTNASWSEIEECGGLGWAIHDSIGSLIGAGCKKISKMWN
IKCLEAKASIEGLKAYEESDDFVGSRRKPPLVVESDSVDVVAAVNRASEDATELGLFVDEIDRFRGSDRVKSLSICSR