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Lag0035978 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035978
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr3:35645009..35645320
RNA-Seq ExpressionLag0035978
SyntenyLag0035978
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039052.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.0e-1047.78Show/hide
Query:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQTPSSNTRER
        I   EN ++ +  S S++ NE   H N+M V+ TD  TS+ +M E+EKKIN++++ +EE+DYEIASLK+ +ESRDA ESS T ++N  E+
Subjt:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQTPSSNTRER

KAA0047487.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.7e-1053.09Show/hide
Query:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS
        EI   ENL++ +  S  K  NE + H ++M VM+TD  TSE++MA++EKKIN++++ IEE+DYEIASLK+  ESRD  ESS
Subjt:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS

KAA0051086.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.0e-1151.81Show/hide
Query:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT
        EIT  ENL++ +  S  +  NE +SH N+M VM+TDA TS  +M ++EKKIN++++ +EE+DYEIASLK+ +ESR+  ESS T
Subjt:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT

KAA0058295.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.2e-1051.25Show/hide
Query:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS
        I   EN  + +  S SK  +E +SH N+M VM+T+  TSE +MAE+EKK+N++++++EE+DYEIA LK+ +ESRDA ESS
Subjt:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS

TYK25824.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.0e-1050Show/hide
Query:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT
        I   EN M+ +  S S+  +E + H N++ VM+TD  TS+++MAE+EKKIN++++ ++E+DYEIASLK+ +ESRDA ESS T
Subjt:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT

TrEMBL top hitse value%identityAlignment
A0A5A7T6D4 Ty3-gypsy retrotransposon protein1.9e-1047.78Show/hide
Query:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQTPSSNTRER
        I   EN ++ +  S S++ NE   H N+M V+ TD  TS+ +M E+EKKIN++++ +EE+DYEIASLK+ +ESRDA ESS T ++N  E+
Subjt:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQTPSSNTRER

A0A5A7TZV9 Ty3-gypsy retrotransposon protein3.3e-1053.09Show/hide
Query:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS
        EI   ENL++ +  S  K  NE + H ++M VM+TD  TSE++MA++EKKIN++++ IEE+DYEIASLK+  ESRD  ESS
Subjt:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS

A0A5A7UA64 Ty3-gypsy retrotransposon protein3.9e-1151.81Show/hide
Query:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT
        EIT  ENL++ +  S  +  NE +SH N+M VM+TDA TS  +M ++EKKIN++++ +EE+DYEIASLK+ +ESR+  ESS T
Subjt:  EITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT

A0A5A7UXF0 Ty3-gypsy retrotransposon protein2.5e-1051.25Show/hide
Query:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS
        I   EN  + +  S SK  +E +SH N+M VM+T+  TSE +MAE+EKK+N++++++EE+DYEIA LK+ +ESRDA ESS
Subjt:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESS

A0A5D3DQH9 Ty3-gypsy retrotransposon protein1.5e-1050Show/hide
Query:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT
        I   EN M+ +  S S+  +E + H N++ VM+TD  TS+++MAE+EKKIN++++ ++E+DYEIASLK+ +ESRDA ESS T
Subjt:  ITTAENLMLGKFISPSKKPNETLSH-NVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCACGACTGCAGAAAATCTTATGCTTGGGAAGTTCATCTCTCCTTCTAAGAAACCAAATGAAACATTAAGTCA
TAACGTGATGTTTGTTATGATGACTGATGCAGGAACTAGTGAAGAACAGATGGCTGAAGTTGAGAAGAAAATCAACCTGATACTGGAGATGATTGAAGAGAAAGACTATG
AAATTGCCTCTCTCAAAAGCCAGATGGAGAGTCGGGATGCCGATGAATCAAGTCAGACCCCGTCATCAAATACAAGGGAGAGACCACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCACGACTGCAGAAAATCTTATGCTTGGGAAGTTCATCTCTCCTTCTAAGAAACCAAATGAAACATTAAGTCA
TAACGTGATGTTTGTTATGATGACTGATGCAGGAACTAGTGAAGAACAGATGGCTGAAGTTGAGAAGAAAATCAACCTGATACTGGAGATGATTGAAGAGAAAGACTATG
AAATTGCCTCTCTCAAAAGCCAGATGGAGAGTCGGGATGCCGATGAATCAAGTCAGACCCCGTCATCAAATACAAGGGAGAGACCACCATAA
Protein sequenceShow/hide protein sequence
MLRRMTESAQLEITTAENLMLGKFISPSKKPNETLSHNVMFVMMTDAGTSEEQMAEVEKKINLILEMIEEKDYEIASLKSQMESRDADESSQTPSSNTRERPP