; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035983 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035983
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr3:35764846..35765870
RNA-Seq ExpressionLag0035983
SyntenyLag0035983
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.4e-2631.4Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERKELV-----
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L + +FSY  ED   KKRQ                            A  RK ++     
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERKELV-----

Query:  ----GKNQTFKLENEKLQ-----QEVKRLMNQGNSFTRGHD----------QRPFKRQKTLLELVAELN---ETINKQKTQLIEFEEANTVSRRTLD---
            GK  +F+  N+ ++     +E  RL+ Q N   R             Q   ++ K+ L+   +L    ET++++  ++ +   +    + TL    
Subjt:  ----GKNQTFKLENEKLQ-----QEVKRLMNQGNSFTRGHD----------QRPFKRQKTLLELVAELN---ETINKQKTQLIEFEEANTVSRRTLD---

Query:  NLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
         L + M  +SE+ E  K+Y+ SL  QL A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V++T+  ++++++RA GFAEWA D+
Subjt:  NLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]2.7e-3032.45Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKK---------------RQLATERKELVGKNQTFKLENEKLQQEV
        YRCG FH VPL+GPWG V+  PLL LRQ W KQFIP TH L + +FSY  ED   KK                Q   +  EL  KN+  + ENEKL++E 
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKK---------------RQLATERKELVGKNQTFKLENEKLQQEV

Query:  KRLMNQG----------NSFTRGHDQ-------------------RPFKRQKT----------------------LLELVAELNETINKQKTQLIEFEEA
         + M+             SF +  D+                   R  K +KT                       L+LV +LN +I K++T++++ E  
Subjt:  KRLMNQG----------NSFTRGHDQ-------------------RPFKRQKT----------------------LLELVAELNETINKQKTQLIEFEEA

Query:  NTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWAR
        N   R+T+D+L + M   SE+ E  K+Y+ SL  QL A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V++T+  ++++++RA  FAE A 
Subjt:  NTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWAR

Query:  DM
        D+
Subjt:  DM

TYK23955.1 girdin-like [Cucumis melo var. makuwa]1.3e-2729.45Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L + +FSY  ED   KKRQ                            A  RK        
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------

Query:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------
                             EL  KN+  + ENEKL++E  + M+          +  S  +  D+                   R  K +KT      
Subjt:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------

Query:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS
                         LE V +L+ +I  ++TQ+++ E  N   R+ +D+L + M  +SE+ E  K+Y  SL  QL AFQ +S++++ E   L+  Y  
Subjt:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS

Query:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
        ++ DY +   D Q+++ ++++T+  ++++++RA  FAEWA D+
Subjt:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

XP_016900531.1 PREDICTED: girdin-like [Cucumis melo]1.3e-2729.45Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L + +FSY  ED   KKRQ                            A  RK        
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------

Query:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------
                             EL  KN+  + ENEKL++E  + M+          +  S  +  D+                   R  K +KT      
Subjt:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------

Query:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS
                         LE V +L+ +I  ++TQ+++ E  N   R+ +D+L + M  +SE+ E  K+Y  SL  QL AFQ +S++++ E   L+  Y  
Subjt:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS

Query:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
        ++ DY +   D Q+++ ++++T+  ++++++RA  FAEWA D+
Subjt:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]9.8e-2830.18Show/hide
Query:  FHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQLA--------------------------TERK--------------
        FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L   +F+Y  ED   KK +                            T R+              
Subjt:  FHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQLA--------------------------TERK--------------

Query:  ----------------ELVGKNQTFKLENEKLQQE----------VKRLMNQGNSFTRGHDQ-------------------RPFKRQKTL----------
                        +L  KN+  + ENEKLQ+E          ++R + +  SF +  D+                   R  K +KT+          
Subjt:  ----------------ELVGKNQTFKLENEKLQQE----------VKRLMNQGNSFTRGHDQ-------------------RPFKRQKTL----------

Query:  ------------LELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDY
                    LELV +L  +I K++ Q+++ E  N   R+T+D+L V M   SE  +  K+Y+ SL  QL AFQ +SE++  E   L+  Y  ++ DY
Subjt:  ------------LELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDY

Query:  AIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
         + R D Q ++ +V++T+  ++I++RRA GFAEWA D+
Subjt:  AIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

TrEMBL top hitse value%identityAlignment
A0A1S4DX26 girdin-like6.2e-2829.45Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L + +FSY  ED   KKRQ                            A  RK        
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------

Query:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------
                             EL  KN+  + ENEKL++E  + M+          +  S  +  D+                   R  K +KT      
Subjt:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------

Query:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS
                         LE V +L+ +I  ++TQ+++ E  N   R+ +D+L + M  +SE+ E  K+Y  SL  QL AFQ +S++++ E   L+  Y  
Subjt:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS

Query:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
        ++ DY +   D Q+++ ++++T+  ++++++RA  FAEWA D+
Subjt:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

A0A5A7T1W2 Retrotrans_gag domain-containing protein5.4e-2430.97Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGL--------HKLEFSYSCEDSNEKKRQLATERK---------------------ELVGKN
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L          +   Y    +N +K  +   R+                     EL  KN
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGL--------HKLEFSYSCEDSNEKKRQLATERK---------------------ELVGKN

Query:  QTFKLENEKLQQEVKRLMNQGNSFTRGHDQRPFKRQKTLLELVAELN---ETINKQKTQLIEFEEANTVSRRTLD---NLSVNMQAQSEKSEAFKSYSSS
        +  + ENEKL++E  + M+        + Q   ++ K+ L+   +L    ET++K+  ++ +   +    + TL     L + M  +SE+ +  K+Y+  
Subjt:  QTFKLENEKLQQEVKRLMNQGNSFTRGHDQRPFKRQKTLLELVAELN---ETINKQKTQLIEFEEANTVSRRTLD---NLSVNMQAQSEKSEAFKSYSSS

Query:  LERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWA
        L  QL A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V++T+  ++++++RA GFAEWA
Subjt:  LERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWA

A0A5A7T5S7 Girdin-like1.2e-2631.4Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERKELV-----
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L + +FSY  ED   KKRQ                            A  RK ++     
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERKELV-----

Query:  ----GKNQTFKLENEKLQ-----QEVKRLMNQGNSFTRGHD----------QRPFKRQKTLLELVAELN---ETINKQKTQLIEFEEANTVSRRTLD---
            GK  +F+  N+ ++     +E  RL+ Q N   R             Q   ++ K+ L+   +L    ET++++  ++ +   +    + TL    
Subjt:  ----GKNQTFKLENEKLQ-----QEVKRLMNQGNSFTRGHD----------QRPFKRQKTLLELVAELN---ETINKQKTQLIEFEEANTVSRRTLD---

Query:  NLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
         L + M  +SE+ E  K+Y+ SL  QL A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V++T+  ++++++RA GFAEWA D+
Subjt:  NLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

A0A5A7T6E2 Girdin-like1.3e-3032.45Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKK---------------RQLATERKELVGKNQTFKLENEKLQQEV
        YRCG FH VPL+GPWG V+  PLL LRQ W KQFIP TH L + +FSY  ED   KK                Q   +  EL  KN+  + ENEKL++E 
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKK---------------RQLATERKELVGKNQTFKLENEKLQQEV

Query:  KRLMNQG----------NSFTRGHDQ-------------------RPFKRQKT----------------------LLELVAELNETINKQKTQLIEFEEA
         + M+             SF +  D+                   R  K +KT                       L+LV +LN +I K++T++++ E  
Subjt:  KRLMNQG----------NSFTRGHDQ-------------------RPFKRQKT----------------------LLELVAELNETINKQKTQLIEFEEA

Query:  NTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWAR
        N   R+T+D+L + M   SE+ E  K+Y+ SL  QL A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V++T+  ++++++RA  FAE A 
Subjt:  NTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWAR

Query:  DM
        D+
Subjt:  DM

A0A5D3DK34 Girdin-like6.2e-2829.45Show/hide
Query:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------
        YRCG FH+VPL+GPWG V+Y PLL LRQ W KQFIP TH L + +FSY  ED   KKRQ                            A  RK        
Subjt:  YRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQL---------------------------ATERK--------

Query:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------
                             EL  KN+  + ENEKL++E  + M+          +  S  +  D+                   R  K +KT      
Subjt:  ---------------------ELVGKNQTFKLENEKLQQEVKRLMN----------QGNSFTRGHDQ-------------------RPFKRQKT------

Query:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS
                         LE V +L+ +I  ++TQ+++ E  N   R+ +D+L + M  +SE+ E  K+Y  SL  QL AFQ +S++++ E   L+  Y  
Subjt:  ----------------LLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSS

Query:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM
        ++ DY +   D Q+++ ++++T+  ++++++RA  FAEWA D+
Subjt:  LRGDYAIMRDDMQIILGKVNRTMNTIKIMARRARGFAEWARDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCTATAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGTTGCGTCCATTATGCTCCGTTGTTGGCCTTGAGACAAAGTTGGTTTAAACAGTT
CATACCAACAACTCATGGTCTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACGAAAAGAAGCGACAACTAGCGACAGAGCGAAAAGAGTTAGTGGGAAAAA
ATCAAACATTCAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGGGCAACTCGTTCACAAGAGGACATGATCAAAGACCTTTCAAGAGGCAA
AAGACTCTCTTAGAGTTAGTTGCGGAATTAAACGAAACCATCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGTTTCAAGGCGAACGTTGGACAA
TCTAAGCGTGAATATGCAGGCTCAATCGGAAAAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAACTCCAAGCATTTCAAAGGGCAAGCGAACAGTTGT
CACTAGAGAGAGGACAACTAGAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGATGACATGCAAATAATTCTTGGGAAAGTAAATCGAACCATGAAC
ACTATCAAGATAATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTCTATAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGTTGCGTCCATTATGCTCCGTTGTTGGCCTTGAGACAAAGTTGGTTTAAACAGTT
CATACCAACAACTCATGGTCTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACGAAAAGAAGCGACAACTAGCGACAGAGCGAAAAGAGTTAGTGGGAAAAA
ATCAAACATTCAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGGGCAACTCGTTCACAAGAGGACATGATCAAAGACCTTTCAAGAGGCAA
AAGACTCTCTTAGAGTTAGTTGCGGAATTAAACGAAACCATCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGTTTCAAGGCGAACGTTGGACAA
TCTAAGCGTGAATATGCAGGCTCAATCGGAAAAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAACTCCAAGCATTTCAAAGGGCAAGCGAACAGTTGT
CACTAGAGAGAGGACAACTAGAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGATGACATGCAAATAATTCTTGGGAAAGTAAATCGAACCATGAAC
ACTATCAAGATAATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATATGTGA
Protein sequenceShow/hide protein sequence
MSFYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFIPTTHGLHKLEFSYSCEDSNEKKRQLATERKELVGKNQTFKLENEKLQQEVKRLMNQGNSFTRGHDQRPFKRQ
KTLLELVAELNETINKQKTQLIEFEEANTVSRRTLDNLSVNMQAQSEKSEAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMRDDMQIILGKVNRTMN
TIKIMARRARGFAEWARDM