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Lag0035998 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035998
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr3:36225284..36225661
RNA-Seq ExpressionLag0035998
SyntenyLag0035998
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152547.1 U-box domain-containing protein 38 [Cucumis sativus]1.6e-3775.97Show/hide
Query:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV
        EEV+RESTLLPFKTQPS YA    SSS G  DR+ NHRG  DSY+PN EEES+LI KFRS +EFEQ+EGVISLRKL+KSNESIR SLCTKE LA LLPL+
Subjt:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV

Query:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV
         SRST +QI AVA VVNLSLEK+NKLKIV
Subjt:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV

XP_022923679.1 U-box domain-containing protein 38-like [Cucurbita moschata]2.3e-3677.6Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSS-DREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRS
        EE+VREST+LPFKTQPSCYAA SS  SS DR  +   DSY+PNSEEES+LI KFRS +E EQQEGVISLRKL+KSNES R S+CTKE LA LLPLVSSRS
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSS-DREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRS

Query:  TRIQIKAVAFVVNLSLEKSNKLKIV
        T IQI AVA VVNLSLEKSNKLKI+
Subjt:  TRIQIKAVAFVVNLSLEKSNKLKIV

XP_023001501.1 U-box domain-containing protein 38-like [Cucurbita maxima]2.3e-3677.42Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST
        EE+VREST+LPFKTQPSCYAA SS  SS        DSY+PNSEEES+LI KFRS +EFEQQEGVISLRKL+KSNES RVS+CTKE LA L PLVSSRST
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST

Query:  RIQIKAVAFVVNLSLEKSNKLKIV
         IQI AVA VVNLSLEKSNKLKI+
Subjt:  RIQIKAVAFVVNLSLEKSNKLKIV

XP_023519818.1 U-box domain-containing protein 38-like [Cucurbita pepo subsp. pepo]5.4e-3880Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSS-DREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRS
        EE+VREST+LPFKTQPSCYAA SS  SS DR  +   DSY+PNSEEES LI KFRS +EFEQQEGVISLRKL+KSNESIR SLCTKE LA LLPLVSSRS
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSS-DREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRS

Query:  TRIQIKAVAFVVNLSLEKSNKLKIV
        T IQI AVA VVNLSLEKSNKLKI+
Subjt:  TRIQIKAVAFVVNLSLEKSNKLKIV

XP_038895164.1 U-box domain-containing protein 38-like [Benincasa hispida]9.3e-3878.63Show/hide
Query:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDRE--PNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLP
        EE+VRESTLLPFKTQPS YAA   SSS GS DRE  PNHRG  DSYSPNSEEES+LI KF+S +E+EQ+EGVISLRKL+KSNESIR SLCTKE LA LLP
Subjt:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDRE--PNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLP

Query:  LVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV
        LV SRS  IQI AVA VVNLSLEK NKLKIV
Subjt:  LVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV

TrEMBL top hitse value%identityAlignment
A0A0A0LR64 RING-type E3 ubiquitin transferase7.7e-3875.97Show/hide
Query:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV
        EEV+RESTLLPFKTQPS YA    SSS G  DR+ NHRG  DSY+PN EEES+LI KFRS +EFEQ+EGVISLRKL+KSNESIR SLCTKE LA LLPL+
Subjt:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV

Query:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV
         SRST +QI AVA VVNLSLEK+NKLKIV
Subjt:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV

A0A5A7ULP5 RING-type E3 ubiquitin transferase2.7e-3575.19Show/hide
Query:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV
        EE  RESTLLPFKTQPS YAA   SSS G  DR+ NH G  DS SPN EEES+LI KFRS +EFEQ+EGVISLRKL+KSNESIR SLCTKE LA LLPLV
Subjt:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV

Query:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV
         SRS  +QI AVA VVNLSLEK+NKLKIV
Subjt:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV

A0A5D3BJ60 RING-type E3 ubiquitin transferase2.7e-3575.19Show/hide
Query:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV
        EE  RESTLLPFKTQPS YAA   SSS G  DR+ NH G  DS SPN EEES+LI KFRS +EFEQ+EGVISLRKL+KSNESIR SLCTKE LA LLPLV
Subjt:  EEVVRESTLLPFKTQPSCYAA---SSSDGSSDREPNHRG--DSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLV

Query:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV
         SRS  +QI AVA VVNLSLEK+NKLKIV
Subjt:  SSRSTRIQIKAVAFVVNLSLEKSNKLKIV

A0A6J1E734 RING-type E3 ubiquitin transferase1.1e-3677.6Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSS-DREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRS
        EE+VREST+LPFKTQPSCYAA SS  SS DR  +   DSY+PNSEEES+LI KFRS +E EQQEGVISLRKL+KSNES R S+CTKE LA LLPLVSSRS
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSS-DREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRS

Query:  TRIQIKAVAFVVNLSLEKSNKLKIV
        T IQI AVA VVNLSLEKSNKLKI+
Subjt:  TRIQIKAVAFVVNLSLEKSNKLKIV

A0A6J1KIT1 RING-type E3 ubiquitin transferase1.1e-3677.42Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST
        EE+VREST+LPFKTQPSCYAA SS  SS        DSY+PNSEEES+LI KFRS +EFEQQEGVISLRKL+KSNES RVS+CTKE LA L PLVSSRST
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST

Query:  RIQIKAVAFVVNLSLEKSNKLKIV
         IQI AVA VVNLSLEKSNKLKI+
Subjt:  RIQIKAVAFVVNLSLEKSNKLKIV

SwissProt top hitse value%identityAlignment
Q0WUF6 U-box domain-containing protein 411.1e-1249.43Show/hide
Query:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV
        S SP S EE ++  K R  + F+ ++G+I LRK+++S+E +RVSLCT  +L+ L  L+ SR   +Q  A A VVNLSLEK NK+KIV
Subjt:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV

Q9FJP6 U-box domain-containing protein 389.7e-1440.5Show/hide
Query:  TLLPFKTQPSCYAASSSDGSSDRE--PNHR--GDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQ
        T LP  T+P+C++ S S  SS+ E   +H    +S S  +EE+  +  K +S E F+Q++G+I +RK++++N+  RVSLC+  +L+ L  ++ SR + +Q
Subjt:  TLLPFKTQPSCYAASSSDGSSDRE--PNHR--GDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQ

Query:  IKAVAFVVNLSLEKSNKLKIV
          A+A +VNLSL+K NKL IV
Subjt:  IKAVAFVVNLSLEKSNKLKIV

Q9FL17 U-box domain-containing protein 403.7e-1338.71Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST
        E +   S  L   T+PSC+++ SS      EPN         + EE  L+ K +S    E +E +IS+R++++ +ES R+SLCT  +++ L  L+ SR  
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST

Query:  RIQIKAVAFVVNLSLEKSNKLKIV
         +Q+   A +VNLSLEKSNK+KIV
Subjt:  RIQIKAVAFVVNLSLEKSNKLKIV

Q9STT1 U-box domain-containing protein 398.2e-1348.28Show/hide
Query:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV
        S+ P S EE ++  K  SV+  + ++G+I LRK ++SNE+ R+SLCT  +L+ L  L+ SR   +Q  A A +VNLSLEK NKLKIV
Subjt:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV

Arabidopsis top hitse value%identityAlignment
AT3G47820.1 PLANT U-BOX 395.8e-1448.28Show/hide
Query:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV
        S+ P S EE ++  K  SV+  + ++G+I LRK ++SNE+ R+SLCT  +L+ L  L+ SR   +Q  A A +VNLSLEK NKLKIV
Subjt:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV

AT5G40140.1 RING/U-box superfamily protein with ARM repeat domain2.6e-1438.71Show/hide
Query:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST
        E +   S  L   T+PSC+++ SS      EPN         + EE  L+ K +S    E +E +IS+R++++ +ES R+SLCT  +++ L  L+ SR  
Subjt:  EEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRST

Query:  RIQIKAVAFVVNLSLEKSNKLKIV
         +Q+   A +VNLSLEKSNK+KIV
Subjt:  RIQIKAVAFVVNLSLEKSNKLKIV

AT5G62560.1 RING/U-box superfamily protein with ARM repeat domain7.6e-1449.43Show/hide
Query:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV
        S SP S EE ++  K R  + F+ ++G+I LRK+++S+E +RVSLCT  +L+ L  L+ SR   +Q  A A VVNLSLEK NK+KIV
Subjt:  SYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAFVVNLSLEKSNKLKIV

AT5G65200.1 plant U-box 386.9e-1540.5Show/hide
Query:  TLLPFKTQPSCYAASSSDGSSDRE--PNHR--GDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQ
        T LP  T+P+C++ S S  SS+ E   +H    +S S  +EE+  +  K +S E F+Q++G+I +RK++++N+  RVSLC+  +L+ L  ++ SR + +Q
Subjt:  TLLPFKTQPSCYAASSSDGSSDRE--PNHR--GDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQ

Query:  IKAVAFVVNLSLEKSNKLKIV
          A+A +VNLSL+K NKL IV
Subjt:  IKAVAFVVNLSLEKSNKLKIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGTCGTACGAGAAAGTACTCTTTTGCCCTTTAAAACACAACCCTCTTGTTATGCGGCTTCCTCTTCAGATGGAAGCTCCGACAGAGAGCCCAATCACAGAGG
AGATTCATATTCCCCGAATTCAGAAGAGGAATCTCAACTCATCCCGAAATTCAGAAGCGTTGAGGAATTTGAGCAACAAGAAGGAGTAATTTCCCTAAGAAAATTATCCA
AATCCAACGAGTCGATTAGGGTTTCGTTATGCACAAAGGAATTACTCGCCACCCTACTCCCTCTGGTTTCATCCCGATCTACAAGAATCCAAATAAAGGCCGTAGCTTTC
GTCGTGAATCTCTCCCTGGAGAAATCGAACAAATTGAAGATTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGTCGTACGAGAAAGTACTCTTTTGCCCTTTAAAACACAACCCTCTTGTTATGCGGCTTCCTCTTCAGATGGAAGCTCCGACAGAGAGCCCAATCACAGAGG
AGATTCATATTCCCCGAATTCAGAAGAGGAATCTCAACTCATCCCGAAATTCAGAAGCGTTGAGGAATTTGAGCAACAAGAAGGAGTAATTTCCCTAAGAAAATTATCCA
AATCCAACGAGTCGATTAGGGTTTCGTTATGCACAAAGGAATTACTCGCCACCCTACTCCCTCTGGTTTCATCCCGATCTACAAGAATCCAAATAAAGGCCGTAGCTTTC
GTCGTGAATCTCTCCCTGGAGAAATCGAACAAATTGAAGATTGTATGA
Protein sequenceShow/hide protein sequence
MEEVVRESTLLPFKTQPSCYAASSSDGSSDREPNHRGDSYSPNSEEESQLIPKFRSVEEFEQQEGVISLRKLSKSNESIRVSLCTKELLATLLPLVSSRSTRIQIKAVAF
VVNLSLEKSNKLKIV