; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036065 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036065
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:38307872..38309822
RNA-Seq ExpressionLag0036065
SyntenyLag0036065
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_013651561.1 uncharacterized protein LOC106356339 [Brassica napus]3.0e-0829.75Show/hide
Query:  VEQALKHMFPTKASGPDEFLAVELLLIMSLLGMNAYNLSSGVLEDKLDLMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY----RQLIPLVVFSGGV
        + Q + H   TK SG ++ +A++  +        AY+       + + + ++GF+  WV  I  C+++ ++ VLIN   R +     RQ I +V+   G+
Subjt:  VEQALKHMFPTKASGPDEFLAVELLLIMSLLGMNAYNLSSGVLEDKLDLMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY----RQLIPLVVFSGGV

Query:  PTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQA
             +G YL  P     +K   F  + D +   V GW G   S GGKEV+IKSI  A
Subjt:  PTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQA

XP_022145149.1 uncharacterized protein LOC111014663 [Momordica charantia]4.2e-1035.2Show/hide
Query:  LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY------RQLIPLVVF-----SGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRV
        + RLGF   W++ +  C+ + EF+VLIN V    +      RQ  PL  +     S G   +       +    Y   PSQ  R +   F  + D++ + 
Subjt:  LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY------RQLIPLVVF-----SGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRV

Query:  VQGWKGSLFSAGGKEVLIKSIAQAN
        +QGWKG LFS GGKE+LIK++AQ N
Subjt:  VQGWKGSLFSAGGKEVLIKSIAQAN

XP_028962160.1 uncharacterized protein LOC103417751 [Malus domestica]7.1e-1036.3Show/hide
Query:  LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY------RQLIPL-----VVFSGGVPTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGS
        L++LGF   W + I +CV+T EFAVL+N      +      RQ  PL     ++F      VSD G YL  P+ + R+K      +  ++   VQGWK S
Subjt:  LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY------RQLIPL-----VVFSGGVPTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGS

Query:  LFSAGGKEVLIKSIAQA------NLF-------HELFSTPDAFLWG
          S  GKEVLIK++ QA      NLF       ++L S    F WG
Subjt:  LFSAGGKEVLIKSIAQA------NLF-------HELFSTPDAFLWG

XP_030483480.1 uncharacterized protein LOC115700064 [Cannabis sativa]9.3e-1030.54Show/hide
Query:  LMRLGFAPEWVDQITDCVSTFEFAVLIN------EVCRMHYRQLIPLVVFSG--------------------------GVPTVSDLGYYLEFPSQFPRTK
        +M+ GF   WV+ + DCV+T E+  L+N       V     RQ  PL+ +                            G+ +V+    YL  P+   R K
Subjt:  LMRLGFAPEWVDQITDCVSTFEFAVLIN------EVCRMHYRQLIPLVVFSG--------------------------GVPTVSDLGYYLEFPSQFPRTK

Query:  GLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQA--NLFHELFSTPDA-----------FLWG
           F  I D++++ V+GWK S FSAGG+E+LIK++ QA  N    +F  P A           FLWG
Subjt:  GLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQA--NLFHELFSTPDA-----------FLWG

XP_030924525.1 uncharacterized protein LOC115951461 [Quercus lobata]1.0e-0826.24Show/hide
Query:  GEVEQALKHMFPTKASGPDEFLAVELLLIMS--LLGMNAYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEFAVLIN-------------
        GEV +ALK M+P KA G D F A+  + +      G  A  L      D+++       + +LGF   W   +  C+++  + V +N             
Subjt:  GEVEQALKHMFPTKASGPDEFLAVELLLIMS--LLGMNAYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEFAVLIN-------------

Query:  -------------EVC----RMHYRQLIPLVVFSGGVPTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQANLFHE
                     E C    ++ ++++   +    G   +     YL  PS   R K   F+ +  ++ + + GWK  L S  GKEVLIK++AQA L  E
Subjt:  -------------EVC----RMHYRQLIPLVVFSGGVPTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQANLFHE

Query:  LF
         F
Subjt:  LF

TrEMBL top hitse value%identityAlignment
A0A2N9EEH0 Uncharacterized protein3.7e-1229.13Show/hide
Query:  GEVEQALKHMFPTKASGPDE---------------FLAVELLLIMSLLGMN-----AYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEF
        GEV +AL  M PTKA GPD+                +A E L  M           A  L      D+++       + ++GF   W+  I  C+ +  +
Subjt:  GEVEQALKHMFPTKASGPDE---------------FLAVELLLIMSLLGMN-----AYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEF

Query:  AVLINEV------CRMHYRQLIPL-----VVFSGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQ
        +VL+N             RQ  PL     ++ + G+ T+        DLG YL  P    R K   F  +  +I + +QGWKG L S  G+E+LIKS+AQ
Subjt:  AVLINEV------CRMHYRQLIPL-----VVFSGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQ

Query:  A-------------NLFHELFSTPDAFLWG
        A             NL  E+ S    F WG
Subjt:  A-------------NLFHELFSTPDAFLWG

A0A2N9EEN8 Uncharacterized protein1.2e-1028.7Show/hide
Query:  GEVEQALKHMFPTKASGPDE---------------FLAVELLLIMSLLGMN-----AYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEF
        GEV +AL  M PTKA GPD+                +A E L  M           A  L      D+++       + ++GF    +  I  C+ +  +
Subjt:  GEVEQALKHMFPTKASGPDE---------------FLAVELLLIMSLLGMN-----AYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEF

Query:  AVLINEV------CRMHYRQLIPL-----VVFSGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQ
        +VL+N             RQ  PL     ++ + G+ T+        DLG YL  P    R K   F  +  +I + +QGWKG L S  G+E+LIKS+AQ
Subjt:  AVLINEV------CRMHYRQLIPL-----VVFSGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQ

Query:  A-------------NLFHELFSTPDAFLWG
        A             NL  E+ S    F WG
Subjt:  A-------------NLFHELFSTPDAFLWG

A0A2N9I264 CCHC-type domain-containing protein1.4e-1132.73Show/hide
Query:  EVEQALKHMFPTKASGPDEFLAVELLLIMSLLGMNAYNLSSGVLEDKLD--LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHYR-QLIPLVVFSG--
        EV++AL  M PTKA GP        ++      ++       V  D L   +++LGF P WV  I  CV+T  +A+++N   + + + QL+      G  
Subjt:  EVEQALKHMFPTKASGPDEFLAVELLLIMSLLGMNAYNLSSGVLEDKLD--LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHYR-QLIPLVVFSG--

Query:  GVPTV-----SDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQA
         VP +     +    YL  P    R K   F  I D++ R +QGWK  L S  G+EVLIK++ QA
Subjt:  GVPTV-----SDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIAQA

A0A2N9IFR8 RNase H domain-containing protein1.1e-1129.21Show/hide
Query:  EVEQALKHMFPTKASGPDEFLAVELLLIM------------SLLGMNAYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEFAVLINE---
        E+E ALK M P KA GPD  L  + +LI               LG  A  L      D+++       ++++GF   WV  + +CV T  ++VLINE   
Subjt:  EVEQALKHMFPTKASGPDEFLAVELLLIM------------SLLGMNAYNLSSGVLEDKLD-------LMRLGFAPEWVDQITDCVSTFEFAVLINE---

Query:  --VCRMHYRQLIPLVVFSGGVPTVSDLGY-----------------------YLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIA
          +      + I  +  S G PT++ L +                       YL  PS   R+K   F  + +++   +QGWK  L S  G+EVLIK++ 
Subjt:  --VCRMHYRQLIPLVVFSGGVPTVSDLGY-----------------------YLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIKSIA

Query:  QA
        QA
Subjt:  QA

A0A6J1CUD6 uncharacterized protein LOC1110146632.0e-1035.2Show/hide
Query:  LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY------RQLIPLVVF-----SGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRV
        + RLGF   W++ +  C+ + EF+VLIN V    +      RQ  PL  +     S G   +       +    Y   PSQ  R +   F  + D++ + 
Subjt:  LMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHY------RQLIPLVVF-----SGGVPTV-------SDLGYYLEFPSQFPRTKGLCFRCITDQIRRV

Query:  VQGWKGSLFSAGGKEVLIKSIAQAN
        +QGWKG LFS GGKE+LIK++AQ N
Subjt:  VQGWKGSLFSAGGKEVLIKSIAQAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTACATGGTGTAATAGACGTCCCATATCTAAGCGTCTCCAATCTTGATTGGGCTTGCTCTGATCATCGACCAATTGATCTTAGTTTAGAACCAGTTTCTCGTGT
GTTGCGGCAAGCTCGAAAAGGTCATGGTTTTAAATTCAATGCTCAGTGGGTTCGTCATGAGGAATGTCAAGCAATTATTTGTGATGTGGGAGAATGGGGGGAAGTTGAGC
AAGCCTTGAAGCATATGTTTCCTACAAAGGCTTCTGGGCCTGATGAATTTCTCGCGGTCGAGCTATTACTGATAATGTCATTATTGGGCATGAATGCCTACAATTTATCA
AGCGGCGTTCTTGAGGACAAGTTGGATCTTATGAGGTTGGGTTTTGCGCCCGAATGGGTGGATCAGATCACGGACTGTGTCTCTACTTTTGAGTTTGCTGTGTTGATTAA
TGAGGTTTGTCGCATGCATTACAGACAACTTATTCCTCTAGTTGTATTTTCGGGCGGTGTGCCCACTGTTTCTGATTTGGGGTATTATCTCGAGTTTCCTTCGCAGTTTC
CTCGAACTAAGGGGCTTTGCTTCCGTTGTATTACGGATCAAATTCGACGTGTAGTCCAAGGCTGGAAGGGCTCTTTGTTCTCAGCGGGAGGGAAGGAAGTACTTATTAAG
AGCATTGCACAGGCCAACCTATTCCATGAGTTGTTTTCGACTCCCGATGCTTTTTTGTGGGGAGCTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTACATGGTGTAATAGACGTCCCATATCTAAGCGTCTCCAATCTTGATTGGGCTTGCTCTGATCATCGACCAATTGATCTTAGTTTAGAACCAGTTTCTCGTGT
GTTGCGGCAAGCTCGAAAAGGTCATGGTTTTAAATTCAATGCTCAGTGGGTTCGTCATGAGGAATGTCAAGCAATTATTTGTGATGTGGGAGAATGGGGGGAAGTTGAGC
AAGCCTTGAAGCATATGTTTCCTACAAAGGCTTCTGGGCCTGATGAATTTCTCGCGGTCGAGCTATTACTGATAATGTCATTATTGGGCATGAATGCCTACAATTTATCA
AGCGGCGTTCTTGAGGACAAGTTGGATCTTATGAGGTTGGGTTTTGCGCCCGAATGGGTGGATCAGATCACGGACTGTGTCTCTACTTTTGAGTTTGCTGTGTTGATTAA
TGAGGTTTGTCGCATGCATTACAGACAACTTATTCCTCTAGTTGTATTTTCGGGCGGTGTGCCCACTGTTTCTGATTTGGGGTATTATCTCGAGTTTCCTTCGCAGTTTC
CTCGAACTAAGGGGCTTTGCTTCCGTTGTATTACGGATCAAATTCGACGTGTAGTCCAAGGCTGGAAGGGCTCTTTGTTCTCAGCGGGAGGGAAGGAAGTACTTATTAAG
AGCATTGCACAGGCCAACCTATTCCATGAGTTGTTTTCGACTCCCGATGCTTTTTTGTGGGGAGCTAACTAG
Protein sequenceShow/hide protein sequence
MCLHGVIDVPYLSVSNLDWACSDHRPIDLSLEPVSRVLRQARKGHGFKFNAQWVRHEECQAIICDVGEWGEVEQALKHMFPTKASGPDEFLAVELLLIMSLLGMNAYNLS
SGVLEDKLDLMRLGFAPEWVDQITDCVSTFEFAVLINEVCRMHYRQLIPLVVFSGGVPTVSDLGYYLEFPSQFPRTKGLCFRCITDQIRRVVQGWKGSLFSAGGKEVLIK
SIAQANLFHELFSTPDAFLWGAN