; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036067 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036067
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:38351275..38352100
RNA-Seq ExpressionLag0036067
SyntenyLag0036067
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1842420.1 unnamed protein product [Ananas comosus var. bracteatus]1.6e-2862.39Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME+T EK N+   DLNKPFRF G+HFKRWKGK+LFYLNLLKVAYVLTEKN KK +++ MN +E +EH+EK +K+EK EY   Y LL+ L + FYDYY N 
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWK
         ++ KK+WK
Subjt:  LTTVKKVWK

CAD1844241.1 unnamed protein product [Ananas comosus var. bracteatus]1.3e-2761.47Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME+T EK N+   DLNKPFRF G++FKRWKGK+LFYLNLLKVAYVLTEKN KK +++ MN +E +EH+EK +K+EK EY   Y LL+ L + FYDYY N 
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWK
         ++ KK+WK
Subjt:  LTTVKKVWK

KAF5930758.1 hypothetical protein HYC85_031631 [Camellia sinensis]2.9e-3040.99Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEF-------MEHHEKIDKHE----KY--EYTYLYSLL-
        ME  +EKPNEN  DLNKPFRFKGAHFKRWKGK+LFY +LLKVA++LTEKN  K  +E M  E++            K D  E    KY   + + Y ++ 
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEF-------MEHHEKIDKHE----KY--EYTYLYSLL-

Query:  -SFLVEYFYDYYL-------------------NILTTVKKVWKNFDGKATRGQ----DALIQEVNKI-PTKANVTEEPLV----AMITDIYMVQSVEGWW
           +V+   D+ +                    I+  +   W+ F     R Q     +++++V       A +  E +      ++ DI+MVQSVEGWW
Subjt:  -SFLVEYFYDYYL-------------------NILTTVKKVWKNFDGKATRGQ----DALIQEVNKI-PTKANVTEEPLV----AMITDIYMVQSVEGWW

Query:  ADSGANRHVCYDKDWFKVYTPF
        ADSGANRHVCYDKDWFK +TPF
Subjt:  ADSGANRHVCYDKDWFKVYTPF

XP_018819172.1 uncharacterized protein LOC108989865 [Juglans regia]2.9e-3038.72Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYT--------------YLYSLL
        ME T EK  E++ DLNKPFRFKGA FKRWK K+LFYL+LL V+YVLT KN  K  +E+M   +   H EKI+K+ + +Y               + Y ++
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYT--------------YLYSLL

Query:  --SFLVEYFYDYYL-------------------NILTTVKKVWKNFD---------------------GKATRGQDALIQEVNKIPTKANVTEEPLVAMI
           F+ E   D+ +                    I+  +   W+ F                       +  RGQD LI +     T   +     VA++
Subjt:  --SFLVEYFYDYYL-------------------NILTTVKKVWKNFD---------------------GKATRGQDALIQEVNKIPTKANVTEEPLVAMI

Query:  TDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
        TDI  VQ VEGWWADSGANRHVCYDKDWFK +TPF
Subjt:  TDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

XP_030945271.1 uncharacterized protein LOC115969796 [Quercus lobata]9.9e-4744.69Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        MES+ EKPNE V DLNKPFRFKGAHFKRWKGK+LFYL+LLKV+Y+LT+KN  K  ++ M+ EE++ H EKIDK+ K EY     LL+ L ++FYDYY   
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------
          + KK+WK                           DGK+                                                            
Subjt:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------

Query:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
                RGQDAL+ QE N    TKANVTEEPLVAMITDI MVQ VEGWW DSGANRHVCYDK+WFK+YTPF
Subjt:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

TrEMBL top hitse value%identityAlignment
A0A2N9EB05 Uncharacterized protein3.5e-5050.84Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME TIEKP E+V DLNKPFRFKG +FKRWKGK+LFYL+LLKV+YVLTEKN  K  ++ M+ +E   H EKIDK++K EY   + LL+ L ++FYDYY   
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWKNF-------------------------DGKA--------------------------------TRGQDALI-QEVN-KIPTKANVTEEPLV
         T+ KK+WK                           DGK+                                 RGQDAL+ QE N    TKANVTEE LV
Subjt:  LTTVKKVWKNF-------------------------DGKA--------------------------------TRGQDALI-QEVN-KIPTKANVTEEPLV

Query:  AMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
        AMITD+ MVQ VEGWWADSGANRHVCYDK+WFK YTPF
Subjt:  AMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

A0A2N9ESI2 Uncharacterized protein4.8e-4744.69Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME TIEKP E+V DLNKPFRFKG +FKRWKGK+LFYL+LLKV+YVLTEKN  K  ++ M+ +E   H EKIDK++K EY   + LL+ L ++FYDYY   
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------
         T+ KK+WK                           DGK+                                                            
Subjt:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------

Query:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
                RGQDAL+ QE N    TKANVTEEPLVAMITD+ MVQ VEGWWADSGANRHVCYDK+WFK YTPF
Subjt:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

A0A2N9G1L2 Uncharacterized protein4.8e-4744.69Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME TIEKP E+V DLNKPFRFKG +FKRWKGK+LFYL+LLKV+YVLTEKN  K  ++ M+ +E   H EKIDK++K EY   + LL+ L ++FYDYY   
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------
         T+ KK+WK                           DGK+                                                            
Subjt:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------

Query:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
                RGQDAL+ QE N    TKANVTEEPLVAMITD+ MVQ VEGWWADSGANRHVCYDK+WFK YTPF
Subjt:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

A0A2N9HYX3 Uncharacterized protein3.7e-4745.05Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME TIEKP E+V DLNKPFRFKG +FKRWKGK+LFYL+LLKV+YVLTEKN  K  ++ M+ +E   H EKIDK++K EY   + LL+ L ++FYDYY   
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------
         T+ KK+WK                           DGK+                                                            
Subjt:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------

Query:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
                RGQDAL+ QE N    TKANVTEEPLVAMITDI MVQ VEGWWADSGANRHVCYDK+WFK YTPF
Subjt:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

A0A2N9I4G7 Uncharacterized protein4.8e-4744.69Show/hide
Query:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI
        ME TIEKP E+V DLNKPFRFKG +FKRWKGK+LFYL+LLKV+YVLTEKN  K  ++ M+ +E   H EKIDK++K EY   + LL+ L ++FYDYY   
Subjt:  MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNI

Query:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------
         T+ KK+WK                           DGK+                                                            
Subjt:  LTTVKKVWKNF-------------------------DGKA------------------------------------------------------------

Query:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF
                RGQDAL+ QE N    TKANVTEEPLVAMITD+ MVQ VEGWWADSGANRHVCYDK+WFK YTPF
Subjt:  -------TRGQDALI-QEVN-KIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTACTATTGAGAAGCCAAATGAAAATGTTCGAGATCTCAACAAGCCCTTTCGATTTAAGGGAGCACACTTTAAGAGATGGAAAGGAAAAATGTTGTTCTACCT
TAATCTTCTTAAGGTGGCCTATGTCCTCACAGAAAAGAACCTGAAGAAGTTCGATTCTGAAAGCATGAACGTTGAAGAGTTCATGGAACACCATGAGAAAATTGATAAAC
ATGAGAAATATGAGTACACTTACCTATACTCTCTTTTAAGTTTCCTTGTTGAGTATTTTTATGACTATTATCTTAATATTCTTACAACTGTAAAAAAAGTATGGAAAAAC
TTTGATGGCAAAGCGACAAGAGGGCAAGATGCATTGATTCAAGAAGTCAATAAAATTCCCACCAAGGCCAATGTTACCGAAGAGCCGCTTGTGGCAATGATTACTGATAT
TTATATGGTTCAAAGTGTTGAAGGATGGTGGGCTGATTCTGGAGCCAATAGACATGTCTGTTATGACAAAGATTGGTTCAAAGTTTATACTCCTTTTGTTGGGAATTGGG
GAGTGCGACCAAAGTCTTACATTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTACTATTGAGAAGCCAAATGAAAATGTTCGAGATCTCAACAAGCCCTTTCGATTTAAGGGAGCACACTTTAAGAGATGGAAAGGAAAAATGTTGTTCTACCT
TAATCTTCTTAAGGTGGCCTATGTCCTCACAGAAAAGAACCTGAAGAAGTTCGATTCTGAAAGCATGAACGTTGAAGAGTTCATGGAACACCATGAGAAAATTGATAAAC
ATGAGAAATATGAGTACACTTACCTATACTCTCTTTTAAGTTTCCTTGTTGAGTATTTTTATGACTATTATCTTAATATTCTTACAACTGTAAAAAAAGTATGGAAAAAC
TTTGATGGCAAAGCGACAAGAGGGCAAGATGCATTGATTCAAGAAGTCAATAAAATTCCCACCAAGGCCAATGTTACCGAAGAGCCGCTTGTGGCAATGATTACTGATAT
TTATATGGTTCAAAGTGTTGAAGGATGGTGGGCTGATTCTGGAGCCAATAGACATGTCTGTTATGACAAAGATTGGTTCAAAGTTTATACTCCTTTTGTTGGGAATTGGG
GAGTGCGACCAAAGTCTTACATTGGCTAG
Protein sequenceShow/hide protein sequence
MESTIEKPNENVRDLNKPFRFKGAHFKRWKGKMLFYLNLLKVAYVLTEKNLKKFDSESMNVEEFMEHHEKIDKHEKYEYTYLYSLLSFLVEYFYDYYLNILTTVKKVWKN
FDGKATRGQDALIQEVNKIPTKANVTEEPLVAMITDIYMVQSVEGWWADSGANRHVCYDKDWFKVYTPFVGNWGVRPKSYIG