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Lag0036079 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036079
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:38633465..38634360
RNA-Seq ExpressionLag0036079
SyntenyLag0036079
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH84359.1 zinc CCHC-type-like protein [Trifolium medium]4.4e-3139.47Show/hide
Query:  AIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVVNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLP
        A K  ++ AW+ R+  DI +L KNLFLFKF +   +K+ +                ++ KNG W FD++L++L       + S+++ NKV FW+R+ +LP
Subjt:  AIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVVNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLP

Query:  IGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLKRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGH-VKDCHE
        +  R  +   K+ ++LG   E+D +KE +R G  +RI+  +D+ KPLKRG  LK +    D W+  +YERLPNFCF CG+IGH +KDC E
Subjt:  IGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLKRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGH-VKDCHE

TXG60171.1 hypothetical protein EZV62_014744 [Acer yangbiense]2.6e-3137.02Show/hide
Query:  AQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVVNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKL
        A V+HC+VGK++S + ++  A K  +   W      +I++LG N+F+F F++  DR                    RI + G W+FDKSL+ LE+P    
Subjt:  AQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVVNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKL

Query:  RTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLKRGFMLKSECILNDCWISIRYERLPNFCFHCGK
          S + FNKV  W+++ ++PI   +  T   +   LG V+E+ T  ++  WG  +R+K+ ++ISKPLKR   LK +   N   + ++YERLP FC+ CGK
Subjt:  RTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLKRGFMLKSECILNDCWISIRYERLPNFCFHCGK

Query:  IGHV-KDC
        IGHV KDC
Subjt:  IGHV-KDC

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]7.3e-3431.4Show/hide
Query:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV
        +LL EWK F L  +E +  +D++          ++  ++ KL+S R IS   +KN +  AWK   K F +D +G N+FLF F+   DR            
Subjt:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV

Query:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK
                RIL+ G W FD++L++++ P    +  DMDF  V  W+   +L +   + +   ++ +++G   +V++   +  WG+ +R++++ D+ KPL 
Subjt:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK

Query:  RGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHV-KDCHE
        RG  L  +  +  CWI I+YERLP+F +HCG++ H+ KDC +
Subjt:  RGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHV-KDCHE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.1e-4235.68Show/hide
Query:  EDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQ-VDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNV
        E+LL +W++F L  +E E  +D++  D +K+  Q + + +VGKL++ R+IS   +   +  AWK   +  ++++GKNLFLF F  + D            
Subjt:  EDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQ-VDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNV

Query:  VNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPL
               + R++K G WFFDK+L+VL++PC     S+++FN+V FW+ L +LP+ + + +  I++ +++G  ++VD  ++   WG ++RI++ +DI+KPL
Subjt:  VNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPL

Query:  KRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHVK-DC
        +RG  +  +  +  CWI I+YERLP+FC+ CG IGH   DC
Subjt:  KRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHVK-DC

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.8e-3936.36Show/hide
Query:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV
        DLL EWK F L  +E E  ID++        ++++  +VGKL   R I+   +KN M  AWK  +  F++ +LG NLFLF F   LDR            
Subjt:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV

Query:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK
                +I K+G W FD++L+++ +P   +  S++DF K+  W+R  +LP+G       I++ ++LG   E D    +  WG+N+R+++ +DISKPL+
Subjt:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK

Query:  RGFMLKSECILNDCWISIRYERLPNFCFHCG
        RG  L  +  +   WI I+YERLP+FC+HCG
Subjt:  RGFMLKSECILNDCWISIRYERLPNFCFHCG

TrEMBL top hitse value%identityAlignment
A0A2N9FCN0 CCHC-type domain-containing protein7.8e-3434.82Show/hide
Query:  EDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQV--DHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDI--ENMEK
        +DL+ EW+RF+L EDE    +    ED    N++V   HC++GKLI+ R  +K A+K+ M   W+      + + G NLF+F+F  + +RK +  +  E+
Subjt:  EDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQV--DHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDI--ENMEK

Query:  LNVVNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDIS
          VVN              W FDK LL L E      T+ + F+   FW++L  +P+ +    T  +I   L  V +VD  +   RWG+++R+ + +D++
Subjt:  LNVVNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDIS

Query:  KPLKRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHV-KDCHEK
        KP+ RG ++  +  L   WIS +YERLP  CFHC  +GH+ KDC  K
Subjt:  KPLKRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHV-KDCHEK

A0A2N9GF83 CCHC-type domain-containing protein9.6e-3233.05Show/hide
Query:  LEDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNV
        +E+L+ +W+RF+L EDE      +++E      A   HC++GKL+ ++  +K A+K  M   W         ++G NLFLF+F ++ D K          
Subjt:  LEDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNV

Query:  VNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPL
                 R+ K   W FD +LLVL E       + + FN   FW++L  +P+ +    T  ++  ++G V +VD  ++   WG  +R++I +DI+KP+
Subjt:  VNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPL

Query:  KRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGH
        +RG  L +       WI+ +YERLP FCFHCGK+GH
Subjt:  KRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGH

A0A6J1BSZ1 uncharacterized protein LOC1110054813.5e-3431.4Show/hide
Query:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV
        +LL EWK F L  +E +  +D++          ++  ++ KL+S R IS   +KN +  AWK   K F +D +G N+FLF F+   DR            
Subjt:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV

Query:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK
                RIL+ G W FD++L++++ P    +  DMDF  V  W+   +L +   + +   ++ +++G   +V++   +  WG+ +R++++ D+ KPL 
Subjt:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK

Query:  RGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHV-KDCHE
        RG  L  +  +  CWI I+YERLP+F +HCG++ H+ KDC +
Subjt:  RGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHV-KDCHE

A0A6J1DU55 uncharacterized protein LOC1110231355.4e-4335.68Show/hide
Query:  EDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQ-VDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNV
        E+LL +W++F L  +E E  +D++  D +K+  Q + + +VGKL++ R+IS   +   +  AWK   +  ++++GKNLFLF F  + D            
Subjt:  EDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQ-VDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNV

Query:  VNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPL
               + R++K G WFFDK+L+VL++PC     S+++FN+V FW+ L +LP+ + + +  I++ +++G  ++VD  ++   WG ++RI++ +DI+KPL
Subjt:  VNLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPL

Query:  KRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHVK-DC
        +RG  +  +  +  CWI I+YERLP+FC+ CG IGH   DC
Subjt:  KRGFMLKSECILNDCWISIRYERLPNFCFHCGKIGHVK-DC

A0A6J1DX30 uncharacterized protein LOC1110248744.7e-3936.36Show/hide
Query:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV
        DLL EWK F L  +E E  ID++        ++++  +VGKL   R I+   +KN M  AWK  +  F++ +LG NLFLF F   LDR            
Subjt:  DLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDK-FDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVV

Query:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK
                +I K+G W FD++L+++ +P   +  S++DF K+  W+R  +LP+G       I++ ++LG   E D    +  WG+N+R+++ +DISKPL+
Subjt:  NLLNAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLK

Query:  RGFMLKSECILNDCWISIRYERLPNFCFHCG
        RG  L  +  +   WI I+YERLP+FC+HCG
Subjt:  RGFMLKSECILNDCWISIRYERLPNFCFHCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCATCAATAGAGCTGGAAGATCTACTGGTTGAATGGAAACGTTTCAATCTTTGTGAAGATGAGAGAGAGAACCCCATTGACCTGAACAAAGAGGATTGGATTAA
GATCAATGCTCAAGTTGATCACTGCATTGTGGGGAAGCTGATTTCAAACCGAGTTATTTCAAAAGTAGCTATTAAGAACGCTATGTCGGGTGCCTGGAAAACGAGAGATA
AGTTTGATATTGACAATCTGGGGAAAAATCTTTTCTTGTTTAAATTTGATAGCGATTTAGACAGAAAAGATATTGAAAATATGGAAAAACTGAATGTAGTTAATCTCCTC
AATGCATTTCTATTGAGGATTTTAAAGAACGGTACTTGGTTTTTCGACAAGAGTCTTTTGGTTCTTGAAGAACCTTGTGTGAAGCTCAGAACATCAGATATGGACTTTAA
TAAAGTAGGATTCTGGTTAAGGCTTATCAATCTTCCAATTGGATTTAGAGACCATTCAACAACAATAAAGATTGAAAGTAGTTTGGGAGAAGTTCTTGAAGTTGACACCA
TAAAGGAAGACTCCAGATGGGGGAATAACATCAGAATCAAAATTAAAATGGACATATCTAAACCGCTAAAGAGGGGCTTTATGTTAAAATCAGAATGCATCTTGAATGAC
TGTTGGATTTCAATTAGATATGAGAGACTCCCGAATTTCTGCTTCCACTGTGGCAAGATAGGACATGTTAAAGATTGTCATGAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCATCAATAGAGCTGGAAGATCTACTGGTTGAATGGAAACGTTTCAATCTTTGTGAAGATGAGAGAGAGAACCCCATTGACCTGAACAAAGAGGATTGGATTAA
GATCAATGCTCAAGTTGATCACTGCATTGTGGGGAAGCTGATTTCAAACCGAGTTATTTCAAAAGTAGCTATTAAGAACGCTATGTCGGGTGCCTGGAAAACGAGAGATA
AGTTTGATATTGACAATCTGGGGAAAAATCTTTTCTTGTTTAAATTTGATAGCGATTTAGACAGAAAAGATATTGAAAATATGGAAAAACTGAATGTAGTTAATCTCCTC
AATGCATTTCTATTGAGGATTTTAAAGAACGGTACTTGGTTTTTCGACAAGAGTCTTTTGGTTCTTGAAGAACCTTGTGTGAAGCTCAGAACATCAGATATGGACTTTAA
TAAAGTAGGATTCTGGTTAAGGCTTATCAATCTTCCAATTGGATTTAGAGACCATTCAACAACAATAAAGATTGAAAGTAGTTTGGGAGAAGTTCTTGAAGTTGACACCA
TAAAGGAAGACTCCAGATGGGGGAATAACATCAGAATCAAAATTAAAATGGACATATCTAAACCGCTAAAGAGGGGCTTTATGTTAAAATCAGAATGCATCTTGAATGAC
TGTTGGATTTCAATTAGATATGAGAGACTCCCGAATTTCTGCTTCCACTGTGGCAAGATAGGACATGTTAAAGATTGTCATGAGAAATAG
Protein sequenceShow/hide protein sequence
MSPSIELEDLLVEWKRFNLCEDERENPIDLNKEDWIKINAQVDHCIVGKLISNRVISKVAIKNAMSGAWKTRDKFDIDNLGKNLFLFKFDSDLDRKDIENMEKLNVVNLL
NAFLLRILKNGTWFFDKSLLVLEEPCVKLRTSDMDFNKVGFWLRLINLPIGFRDHSTTIKIESSLGEVLEVDTIKEDSRWGNNIRIKIKMDISKPLKRGFMLKSECILND
CWISIRYERLPNFCFHCGKIGHVKDCHEK