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Lag0036081 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036081
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr3:38641169..38641729
RNA-Seq ExpressionLag0036081
SyntenyLag0036081
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU41445.1 hypothetical protein TSUD_98410 [Trifolium subterraneum]3.2e-1832.94Show/hide
Query:  VWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDL
        +W  LW L +P K  HF WR L+  +P   NL ++GI  +  CP C   +E+S H+   C  AK++W + S  + L+    E+L +  L + ++  +   
Subjt:  VWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDL

Query:  ELIATTCWAIWNDRNKASHNEE-FPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPP
        ELIA T + IW  RN     E+  PP D+ S      L+ ++  N +   +I    S   SS   RWNPP
Subjt:  ELIATTCWAIWNDRNKASHNEE-FPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-2234.64Show/hide
Query:  GGVWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQ-STKVFLDEDFHESLPNRWLRINSENQK
        G  WN++W L +PTKIK F WRS H  IP   NL  RGI     C  C  + ES  H  F C RA++IW++       L  + + S    W  +  + + 
Subjt:  GGVWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQ-STKVFLDEDFHESLPNRWLRINSENQK

Query:  KDLELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQ----VRWNPPTEV
        KDL L A T W IWNDRN   H ++  PV+ K  W+  +L+++ +         +S  SP+  S        W P + V
Subjt:  KDLELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQ----VRWNPPTEV

XP_030478322.1 uncharacterized protein LOC115695396 [Cannabis sativa]1.4e-1834.51Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE
        W  LW+L +P KIKHF WR+ H+ +P +LNL  +    +  C  C    ES  H L GC+RAK IWKS + K F    +   + +  L+      K++ +
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE

Query:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKV
        +  T  W IWN RN    N+     +++  ++ NYL+ Y+ V
Subjt:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKV

XP_030479128.1 uncharacterized protein LOC115696368 [Cannabis sativa]1.1e-1835.21Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE
        W +LW+L +P+KIKHF WR+ H  +P +LNL  +    +  C  C    ES  H L GC+RAK IWKS + K F    +   +    L+      K+D +
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE

Query:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKV
        +  T  W IWN RN    N+     +++  ++ NYL+ Y+ V
Subjt:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKV

XP_030964645.1 uncharacterized protein LOC115985893 [Quercus lobata]2.2e-1932.76Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDED-----FHESLPNRWLRINSEN-
        W+ +W LR+P KI+ F WR+  N +P   NL RR I  +  C  C    E++ H+L+ C RAKE+WK    +V LD D       E +   W   N +  
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDED-----FHESLPNRWLRINSEN-

Query:  QKKDLELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPP
         ++D+ L+  T W IW +RN+  H +   P  + + W ++YLE+Y   N            P   S +V W  P
Subjt:  QKKDLELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPP

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.0e-2234.64Show/hide
Query:  GGVWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQ-STKVFLDEDFHESLPNRWLRINSENQK
        G  WN++W L +PTKIK F WRS H  IP   NL  RGI     C  C  + ES  H  F C RA++IW++       L  + + S    W  +  + + 
Subjt:  GGVWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQ-STKVFLDEDFHESLPNRWLRINSENQK

Query:  KDLELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQ----VRWNPPTEV
        KDL L A T W IWNDRN   H ++  PV+ K  W+  +L+++ +         +S  SP+  S        W P + V
Subjt:  KDLELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQ----VRWNPPTEV

A0A803PL19 Uncharacterized protein1.4e-1931.36Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE
        W +LW+L IP+KIKHF WR+ H+ +P +LNL  +    N  C  C    ES  H L GC RAK IWK+ S K F    +   + N  L+      K+D +
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE

Query:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPPT
        +  T  W IWN RN     +     +++  ++ NYL+ Y+             ++  +     +  PP+
Subjt:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPPT

A0A803PLK9 Uncharacterized protein3.1e-1932.75Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE
        W +LW+L IP+KIKHF WR+ H+ +P +LNL  +    N  C  C    ES  H L GC RAK IWK+ S K F    +   + +  L+      K+D +
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE

Query:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVN------------SEIPRSILSVKSPQVS
        +  T  W IWN RN     +     +++  ++ NYL+ Y+               S IP+S   ++ P +S
Subjt:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVN------------SEIPRSILSVKSPQVS

A0A803QH76 Uncharacterized protein3.1e-1931.46Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE
        WN LW+L++P K+K F WR +++ +P  +NL+ R I  +  C  C    ES  H LF C RAK +W      VF+    +    + +  + + +   DLE
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLE

Query:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYR------KVNSEIPRSILSVKSPQVSSKQVR--WNPPTE
        +I    W IW++RNK  H  +  P  I  S+  NYL  Y+      K  S +  +  +   P  + ++ R  W PP E
Subjt:  LIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYR------KVNSEIPRSILSVKSPQVSSKQVR--WNPPTE

A0A803QQT2 Uncharacterized protein1.4e-1933.73Show/hide
Query:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKL-ESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDL
        W  LW L+IP K+KHF W+  HN++P N+NL++RGI  +V C  C   + ES  H L+ C  +K  W+       L +   E      +RI +E  K+ L
Subjt:  WNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKL-ESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDL

Query:  ELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPP
        E      W IWN RN   H    P  +    W  N+L ++R             +  Q SS+  RW PP
Subjt:  ELIATTCWAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.3e-0526.79Show/hide
Query:  KHFY--WRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPN--RWLRINSENQKKDLELIA--TTCW
        KH +  W S  + +P    L+  G   +  C  C I+ ES DH+LF C  A ++W+   +++   +    S      W+R +S +    L  ++     +
Subjt:  KHFY--WRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPN--RWLRINSENQKKDLELIA--TTCW

Query:  AIWNDRNKASHN
         IW  RN   HN
Subjt:  AIWNDRNKASHN

AT2G02650.1 Ribonuclease H-like superfamily protein8.1e-1224.31Show/hide
Query:  LWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLD----EDFHESLPNRWLRINSENQKKDL
        +W L +  KIKHF WR +   +  N  L  R I+ +  C  C I+ E+  HI+F C   + +W+S +  +         F ++L NR ++++       L
Subjt:  LWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLD----EDFHESLPNRWLRINSENQKKDL

Query:  E--LIATTCWAIWNDRNKASHNEEFPPVDIK--------SSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPPTE
        +  L     W +W  RN     ++    D +        + W+     N    N+ +  +   +++ +  S Q  WNPP E
Subjt:  E--LIATTCWAIWNDRNKASHNEEFPPVDIK--------SSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPPTE

AT3G09510.1 Ribonuclease H-like superfamily protein1.1e-1329.03Show/hide
Query:  LWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKV----FLDEDFHESLPNRWLRINSENQKKDL
        +WNL I  K+KHF WR+L   +     L+ RG+ I+  CP C  + ES +H LF C  A   W+   + +     +  DF E++ N  L    +    D 
Subjt:  LWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKV----FLDEDFHESLPNRWLRINSENQKKDL

Query:  E--LIATTCWAIWNDRNKASHNE--EFPPVDIKSS------WIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRW-NPP-TEVLC
           L     W IW  RN    N+  E P   + S+      W+ N  ++++K  S          + Q++  ++ W NPP T V C
Subjt:  E--LIATTCWAIWNDRNKASHNE--EFPPVDIKSS------WIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRW-NPP-TEVLC

AT3G25270.1 Ribonuclease H-like superfamily protein1.4e-1121.74Show/hide
Query:  LWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLELIA
        +W L+   KIKHF W+ L   +    NL RR I  +  C  C  + E+S H+ F C  A+++W++              +P++ LR      +  +EL+ 
Subjt:  LWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLELIA

Query:  TTC----------------WAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNS---EIPRSILSVKSPQVSSKQVRWNPP
        ++C                W +W  RN+    ++           RN ++ +   N+    + + + S +  Q +  + +W  P
Subjt:  TTC----------------WAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNS---EIPRSILSVKSPQVSSKQVRWNPP

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.5e-0530.77Show/hide
Query:  GININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDE----DFHESLPNRWLRINSENQKKDL-ELIA-TTCWAIWNDRNKASHN
        G+ ++  C  C    E+ DH+L GCS +K +W S  +++ L      ++ E L   W+R +S +    L +L+A +  +A W  RN   HN
Subjt:  GININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDE----DFHESLPNRWLRINSENQKKDL-ELIA-TTCWAIWNDRNKASHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGGTCTGGAATAATCTTTGGAACCTTCGAATCCCTACCAAAATCAAACACTTCTACTGGAGATCACTACACAATTTTATCCCTAGAAATTTGAATTTGAGTAG
AAGAGGAATTAATATTAATGTCTATTGTCCTTTCTGTTTTATTAAACTTGAATCTTCTGATCATATTTTGTTTGGTTGTTCTCGAGCTAAGGAAATTTGGAAGAGTCAGT
CTACAAAAGTTTTTCTAGATGAAGATTTTCACGAAAGTTTGCCTAATCGTTGGCTAAGGATTAATTCAGAGAATCAGAAGAAGGATCTAGAGCTGATAGCAACAACATGC
TGGGCAATTTGGAACGATCGAAACAAAGCATCTCATAATGAAGAATTCCCCCCAGTTGATATTAAAAGCAGTTGGATTCGGAATTACCTGGAAAATTATAGAAAGGTGAA
TTCAGAAATCCCTCGATCCATCTTATCTGTCAAGTCTCCCCAAGTATCTTCGAAGCAGGTTCGCTGGAATCCCCCTACTGAGGTTCTTTGCCTTCGTCGACTGGCATTGG
TTGCGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGGTCTGGAATAATCTTTGGAACCTTCGAATCCCTACCAAAATCAAACACTTCTACTGGAGATCACTACACAATTTTATCCCTAGAAATTTGAATTTGAGTAG
AAGAGGAATTAATATTAATGTCTATTGTCCTTTCTGTTTTATTAAACTTGAATCTTCTGATCATATTTTGTTTGGTTGTTCTCGAGCTAAGGAAATTTGGAAGAGTCAGT
CTACAAAAGTTTTTCTAGATGAAGATTTTCACGAAAGTTTGCCTAATCGTTGGCTAAGGATTAATTCAGAGAATCAGAAGAAGGATCTAGAGCTGATAGCAACAACATGC
TGGGCAATTTGGAACGATCGAAACAAAGCATCTCATAATGAAGAATTCCCCCCAGTTGATATTAAAAGCAGTTGGATTCGGAATTACCTGGAAAATTATAGAAAGGTGAA
TTCAGAAATCCCTCGATCCATCTTATCTGTCAAGTCTCCCCAAGTATCTTCGAAGCAGGTTCGCTGGAATCCCCCTACTGAGGTTCTTTGCCTTCGTCGACTGGCATTGG
TTGCGTCCTGA
Protein sequenceShow/hide protein sequence
MGGVWNNLWNLRIPTKIKHFYWRSLHNFIPRNLNLSRRGININVYCPFCFIKLESSDHILFGCSRAKEIWKSQSTKVFLDEDFHESLPNRWLRINSENQKKDLELIATTC
WAIWNDRNKASHNEEFPPVDIKSSWIRNYLENYRKVNSEIPRSILSVKSPQVSSKQVRWNPPTEVLCLRRLALVAS