; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036088 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036088
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:38775917..38779338
RNA-Seq ExpressionLag0036088
SyntenyLag0036088
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8501049.1 hypothetical protein CXB51_003148 [Gossypium anomalum]2.3e-5140.4Show/hide
Query:  LDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATT---------ISKNSRMQAQIKAIHSMMMGMTMN----------NQ-ANIA----
        L+  ++ +V+ASANG+ L KS NEA+ I++ IA+ +  W    AT+         +   + + +Q+ +I SM+  +T N          NQ  NIA    
Subjt:  LDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATT---------ISKNSRMQAQIKAIHSMMMGMTMN----------NQ-ANIA----

Query:  ----------------------------------LPMLFLLLVVRSVVQTQQSNLETLMKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPH
                                          LP  F   V R V     ++LE L+K YMA+NDAT+RNLE Q+GQ+A E++NRPQG  PS T+   
Subjt:  ----------------------------------LPMLFLLLVVRSVVQTQQSNLETLMKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPH

Query:  GEGKEQCKA-----------NL----KKWIRIR-------------WPK----VPNSGYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQ
          GKE CKA           N+    K+ +  +              PK    VP S Y PPPPYPQR +   Q++QFKKFLDVLK+L +NIPL+EALEQ
Subjt:  GEGKEQCKA-----------NL----KKWIRIR-------------WPK----VPNSGYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQ

Query:  MPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSI
        MP YVKF+KDILSKKR+LGE+ETVALT+  +  +++++PP LKDPG FTIPC+I
Subjt:  MPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSI

XP_030494994.1 uncharacterized protein LOC115710785 [Cannabis sativa]2.6e-4750.69Show/hide
Query:  TQQSNLETLMKEYMARND--ATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-------------------------NLKKWIRIRWPKV
        +Q S+LE+LM++YMA+ND  A++RNL++QLG++A ++KNRPQGT PS TE P  +GKE CKA                          +KK   I   ++
Subjt:  TQQSNLETLMKEYMARND--ATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-------------------------NLKKWIRIRWPKV

Query:  P-------------NSGYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPM
        P              S    PPP+PQ+F+    D QF++FLDVLK+L +NI L+EALEQMPTYVKFL+DIL+KKRRLGE+ETVALTE  SA++K+++PP 
Subjt:  P-------------NSGYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPM

Query:  LKDPGSFTIPCSIRGKD
        LKDPGSFTIP SI G+D
Subjt:  LKDPGSFTIPCSIRGKD

XP_030505532.1 uncharacterized protein LOC115720524 [Cannabis sativa]1.6e-5242.62Show/hide
Query:  LDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATTISK-----------NSRMQAQIKAIHS------------------------MMM
        L+ AS+ +++ASANG+ L KS NEA  IL+TIA+ N  W  T   T  K           NS+      AI S                          M
Subjt:  LDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATTISK-----------NSRMQAQIKAIHS------------------------MMM

Query:  G---MTMNN-------------------------------QANIALPMLFLLLVVRS--VVQTQQSNLETLMKEYMARNDATI-------RNLEVQLGQI
        G      NN                               Q   A P  F      S     +Q S+LE+LM++YMA+ DA I       RNLE+QLG +
Subjt:  G---MTMNN-------------------------------QANIALPMLFLLLVVRS--VVQTQQSNLETLMKEYMARNDATI-------RNLEVQLGQI

Query:  AQEIKNRPQGTFPSKTEIPHGEGKEQCKA----------NLKKWIRIRWPK--VPNSGYI--------PPPPYPQRFRHASQDIQFKKFLDVLKKLDVNI
        A E+K RPQG+ PS T+ P  +GKEQCK+          N ++ I++   K   PNS           PP P+PQRFR   QD QFKKFLDVLK+L +NI
Subjt:  AQEIKNRPQGTFPSKTEIPHGEGKEQCKA----------NLKKWIRIRWPK--VPNSGYI--------PPPPYPQRFRHASQDIQFKKFLDVLKKLDVNI

Query:  PLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD
        PL+EALEQMP YVKFLKDIL+KKRRLGE+ETVALTE  +A++K++IPP LKDPGSFTIPCSIRG+D
Subjt:  PLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]1.4e-4851.57Show/hide
Query:  TQQSNLETLMKEYMARNDATI-------RNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA--------------------------------N
        +Q S+LE+LM++YMA+NDA I       RNLEVQLGQ+A ++KNRPQGT PS T+ P  +GKE CKA                                N
Subjt:  TQQSNLETLMKEYMARNDATI-------RNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA--------------------------------N

Query:  LKKWIRIRWPK---------VPNSGYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSAL
            + +++PK            S   PP P+PQRF+    D QF++FLDVLK+L +NIPL+EALEQMPTYVKFLKDIL+KKRRLGE+ETVALTE  SA+
Subjt:  LKKWIRIRWPK---------VPNSGYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSAL

Query:  VKNEIPPMLKDPGSFTIPCSIRG
        +K++IPP LKDPGSFTIP SI G
Subjt:  VKNEIPPMLKDPGSFTIPCSIRG

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]1.4e-5644.87Show/hide
Query:  LDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATTISKNSRMQA--QIKAIHSMMMGMTMNN-----------------QANIALPMLF
        L+ AS+ +++ASANG+ L KS NEA  IL+TIA+ N  W  T A T  K + +     I A+ + M  MT N+                 Q   A P  F
Subjt:  LDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATTISKNSRMQA--QIKAIHSMMMGMTMNN-----------------QANIALPMLF

Query:  LLLVVRS--VVQTQQSNLETLMKEYMARNDATI-------RNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA---NLKKWIRIRWPKVPNSG-
              S      Q S+LE+LM++YMA+NDA I       RNLE+QLG +A E+K RPQG+ PS TE P  +GKEQCK+      K ++    ++  SG 
Subjt:  LLLVVRS--VVQTQQSNLETLMKEYMARNDATI-------RNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA---NLKKWIRIRWPKVPNSG-

Query:  -----------------------------------------YIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRR
                                                   PP P+PQRFR   QD QFKKFLDVLK+L +NIPL+EALEQMP YVKFLKDIL+KKRR
Subjt:  -----------------------------------------YIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRR

Query:  LGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD
        LGE+ETVALTE  SA++K++IPP LKDPGSFTIPCSI G+D
Subjt:  LGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD

TrEMBL top hitse value%identityAlignment
A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129453.4e-4046.36Show/hide
Query:  RSVVQTQQSNLETLMKEYMARND-------ATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRW-----------------
        R  +  ++S LE L+ +Y+++ D       A++RNLE Q+GQ+A  I NRPQG+ PS T+I + +GKEQC+A  L+    I                   
Subjt:  RSVVQTQQSNLETLMKEYMARND-------ATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRW-----------------

Query:  -------------PKVPNSG----YIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALV
                      K  N G      PPPP+PQR +    + QF+KFL+V KKL +NIP  EALEQMP+YVKFLKDILSKKR+LGE+ETV LTE  SA++
Subjt:  -------------PKVPNSG----YIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALV

Query:  KNEIPPMLKDPGSFTIPCSI
        +N++PP LKDPGSFTIPC+I
Subjt:  KNEIPPMLKDPGSFTIPCSI

A0A6J1CPJ3 uncharacterized protein LOC1110129471.5e-4354.8Show/hide
Query:  MKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPH---GEGKEQCKANLKKWIRIRWPKV------PNSGYIPPPPYPQRFRHASQDIQFKKF
        +K+YM RND T+RNLE+QLGQ+A E++ RPQG+ PS TE P         + K       +I  P+V        S    PPP+PQR    +QD  F+KF
Subjt:  MKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPH---GEGKEQCKANLKKWIRIRWPKV------PNSGYIPPPPYPQRFRHASQDIQFKKF

Query:  LDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD
        LD+LK+L +NIP +EALEQMPTY KFLKDI+++K++LGEYETVALTECSS + K++ PP LKDPGSFTI C I GKD
Subjt:  LDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD

A0A6J1DTH7 uncharacterized protein LOC1110229713.7e-3946.39Show/hide
Query:  IRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRWPKVP------------------------------------NSGYIPPPP
        +RNLEVQ+GQ++ ++K RPQG+FP  TE+P  +GKEQCKA  L+  +    PK+P                                    NS ++  PP
Subjt:  IRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRWPKVP------------------------------------NSGYIPPPP

Query:  YPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD
        +PQ     +Q+ QF+KFLD+LK+L +NIPLL+ALEQMP Y KFLKDI+S+K++LGE+E VA+T+CSS  V + +P   KDP SFTIPCSI GK+
Subjt:  YPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKD

A0A6J1DU40 uncharacterized protein LOC1110244264.2e-4347.26Show/hide
Query:  MKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRWPKVPN--------------------------------S
        +K+YM RND T+RNLE+QLGQ+A E++ RP+G+  S T  P   GKE C +   +  +    P++P+                                S
Subjt:  MKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRWPKVPN--------------------------------S

Query:  GYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGK
           PPPP+PQR    +QD  F+KFLD+LK+L +N+P +EALEQMPTY KFLKDI+++K++LGEYETVAL E SS + K+++PP LKDPGSFTIPC I GK
Subjt:  GYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGK

Query:  D
        D
Subjt:  D

A0A6J1DY39 uncharacterized protein LOC1110256531.4e-4648.76Show/hide
Query:  MKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRWPKVPN--------------------------------S
        +K+YM RND T+R LE+QLGQ+  E++ RPQG+ PS TE P   GKE C +   +  ++   P++P+                                S
Subjt:  MKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKA-NLKKWIRIRWPKVPN--------------------------------S

Query:  GYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGK
           PPPP+PQR    +QD  F+KFLD+LK+L +NIP +EALEQMPTY KF+KDI+++K++LGEYETVALTECSS + K+++PP LKDPGSFTIPC I GK
Subjt:  GYIPPPPYPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGK

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAAACGTCTCACCACTGTAGCGTCTCGACTCTGATGACGAGTGTCTCGACGCTGATGAAGCTCCAGGGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTT
TAAGCCCCAAATTGCTTCCAAAGCTCCGTTAGATCAAGCTTCAAAGGCACTAGTCAATGCATCTGCAAACGGATCTTTCTTGAAAAAGTCTGCAAATGAGGCACATGCTA
TCTTGGACACCATAGCCACCAAGAATTGCCATTGGGGAGAGACCGAGGCAACAACAATCTCGAAGAATTCTAGGATGCAAGCCCAGATCAAGGCTATCCATAGCATGATG
ATGGGCATGACCATGAACAATCAAGCAAATATAGCCCTGCCAATGCTATTTCTTCTCCTTGTTGTGAGATCTGTGGTGCAGACTCAACAGTCAAATTTAGAGACTCTTAT
GAAGGAATACATGGCAAGAAACGATGCTACAATAAGGAATTTGGAAGTACAACTTGGACAAATTGCTCAGGAGATTAAGAATAGACCACAAGGGACGTTTCCTAGCAAGA
CCGAGATCCCTCACGGAGAAGGCAAGGAGCAATGCAAGGCCAACCTTAAGAAGTGGATTAGAATACGATGGCCCAAAGTACCCAATTCAGGATACATACCACCTCCTCCA
TACCCTCAGAGATTCAGACATGCTTCGCAGGATATACAGTTCAAGAAGTTTTTAGATGTATTAAAGAAGTTAGACGTCAATATCCCATTGTTAGAAGCACTTGAACAAAT
GCCTACCTATGTGAAGTTCTTGAAAGATATTTTGTCAAAGAAGAGAAGGTTGGGAGAATACGAAACTGTTGCACTCACTGAATGTTCCAGTGCACTGGTCAAGAATGAGA
TCCCTCCCATGCTCAAAGACCCAGGAAGTTTCACCATTCCATGCTCCATTCGAGGCAAGGATGAAATGATGAAAAGAGAAACTTTGGAGGATATACTTGGAGATGAAGAA
CCAGAAGAAAAAGGTGGGAAAAAGATTGAAGTTGAAGAAATCAATCAACCCATGAAAAGACAAAAGATCAAACCATATTGGGGGAAGGGCTTCGAGGATGAGGAAGCCCA
TGTCTCCGTGATTGACCTGGGTTTCAAGAGGCGGCTAAAGGGATTTTTTCGGTTCGGTTCGGCTTGTCTGGGGTCAGTTTGGCCTGGTCCAGCCCGATTCAAGCTTGTTT
TGATTATTTGGAGACTGGTTCGAAGCGGTTCGGGTCGGTTCGTGCGGTCTAGTCGGGTTCTGAAGCTGCAGAAGGATATTTTTAGGATAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAAACGTCTCACCACTGTAGCGTCTCGACTCTGATGACGAGTGTCTCGACGCTGATGAAGCTCCAGGGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTT
TAAGCCCCAAATTGCTTCCAAAGCTCCGTTAGATCAAGCTTCAAAGGCACTAGTCAATGCATCTGCAAACGGATCTTTCTTGAAAAAGTCTGCAAATGAGGCACATGCTA
TCTTGGACACCATAGCCACCAAGAATTGCCATTGGGGAGAGACCGAGGCAACAACAATCTCGAAGAATTCTAGGATGCAAGCCCAGATCAAGGCTATCCATAGCATGATG
ATGGGCATGACCATGAACAATCAAGCAAATATAGCCCTGCCAATGCTATTTCTTCTCCTTGTTGTGAGATCTGTGGTGCAGACTCAACAGTCAAATTTAGAGACTCTTAT
GAAGGAATACATGGCAAGAAACGATGCTACAATAAGGAATTTGGAAGTACAACTTGGACAAATTGCTCAGGAGATTAAGAATAGACCACAAGGGACGTTTCCTAGCAAGA
CCGAGATCCCTCACGGAGAAGGCAAGGAGCAATGCAAGGCCAACCTTAAGAAGTGGATTAGAATACGATGGCCCAAAGTACCCAATTCAGGATACATACCACCTCCTCCA
TACCCTCAGAGATTCAGACATGCTTCGCAGGATATACAGTTCAAGAAGTTTTTAGATGTATTAAAGAAGTTAGACGTCAATATCCCATTGTTAGAAGCACTTGAACAAAT
GCCTACCTATGTGAAGTTCTTGAAAGATATTTTGTCAAAGAAGAGAAGGTTGGGAGAATACGAAACTGTTGCACTCACTGAATGTTCCAGTGCACTGGTCAAGAATGAGA
TCCCTCCCATGCTCAAAGACCCAGGAAGTTTCACCATTCCATGCTCCATTCGAGGCAAGGATGAAATGATGAAAAGAGAAACTTTGGAGGATATACTTGGAGATGAAGAA
CCAGAAGAAAAAGGTGGGAAAAAGATTGAAGTTGAAGAAATCAATCAACCCATGAAAAGACAAAAGATCAAACCATATTGGGGGAAGGGCTTCGAGGATGAGGAAGCCCA
TGTCTCCGTGATTGACCTGGGTTTCAAGAGGCGGCTAAAGGGATTTTTTCGGTTCGGTTCGGCTTGTCTGGGGTCAGTTTGGCCTGGTCCAGCCCGATTCAAGCTTGTTT
TGATTATTTGGAGACTGGTTCGAAGCGGTTCGGGTCGGTTCGTGCGGTCTAGTCGGGTTCTGAAGCTGCAGAAGGATATTTTTAGGATAAAATAG
Protein sequenceShow/hide protein sequence
MGQTSHHCSVSTLMTSVSTLMKLQGQNGHFTLRFRSFKPQIASKAPLDQASKALVNASANGSFLKKSANEAHAILDTIATKNCHWGETEATTISKNSRMQAQIKAIHSMM
MGMTMNNQANIALPMLFLLLVVRSVVQTQQSNLETLMKEYMARNDATIRNLEVQLGQIAQEIKNRPQGTFPSKTEIPHGEGKEQCKANLKKWIRIRWPKVPNSGYIPPPP
YPQRFRHASQDIQFKKFLDVLKKLDVNIPLLEALEQMPTYVKFLKDILSKKRRLGEYETVALTECSSALVKNEIPPMLKDPGSFTIPCSIRGKDEMMKRETLEDILGDEE
PEEKGGKKIEVEEINQPMKRQKIKPYWGKGFEDEEAHVSVIDLGFKRRLKGFFRFGSACLGSVWPGPARFKLVLIIWRLVRSGSGRFVRSSRVLKLQKDIFRIK