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Lag0036103 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036103
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description39S ribosomal protein L45
Genome locationchr3:39021871..39023031
RNA-Seq ExpressionLag0036103
SyntenyLag0036103
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10219.1 39S ribosomal protein L45 [Cucumis melo var. makuwa]1.3e-2978.12Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMI+ SAVAAE S+FSHGI  RLVTTQAKAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ

XP_004135632.1 uncharacterized protein LOC101211143 isoform X1 [Cucumis sativus]2.8e-2978.12Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMII SAVAAE S+FSH  GIRLVTTQ KAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ

XP_008450683.1 PREDICTED: 39S ribosomal protein L45, mitochondrial isoform X1 [Cucumis melo]1.3e-2978.12Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMI+ SAVAAE S+FSHGI  RLVTTQAKAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ

XP_011659907.1 uncharacterized protein LOC101211143 isoform X2 [Cucumis sativus]2.0e-2777.08Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMII SA AAE S+FSH  GIRLVTTQ KAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ

XP_038879465.1 uncharacterized protein LOC120071330 isoform X1 [Benincasa hispida]4.0e-2877.32Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHG--IRLVTTQAKAPPQI
        MNF +LR +QTLYR+A NR+F S LGSSANYS G+ NVSQLGIQKTSSFLSNS T FSLA+GHKMIISSAVAAE  +FSH   IRLVTTQAKAPPQ+
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHG--IRLVTTQAKAPPQI

TrEMBL top hitse value%identityAlignment
A0A0A0LWH6 Tim44 domain-containing protein1.4e-2978.12Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMII SAVAAE S+FSH  GIRLVTTQ KAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ

A0A1S3BPQ8 39S ribosomal protein L45, mitochondrial isoform X16.1e-3078.12Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMI+ SAVAAE S+FSHGI  RLVTTQAKAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ

A0A5D3CJ04 39S ribosomal protein L456.1e-3078.12Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ
        MNF +LR++QTLYRT + R FTS +GSSANYSCG+ NVSQLGIQKTSSFLSNSH+ FSLA+GHKMI+ SAVAAE S+FSHGI  RLVTTQAKAPPQ
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGI--RLVTTQAKAPPQ

A0A6J1DZD4 uncharacterized protein LOC1110256821.3e-2776.84Show/hide
Query:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGIRLVTTQAKAPPQI
        MNFRS R VQTL+RTAQNR+FTS L +S  YSCG+ N SQLGIQKTSSFLSNS T F L +GHK  ISSAVAAELS+FSHGIR VTTQAKAPPQ+
Subjt:  MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGIRLVTTQAKAPPQI

A0A6J1HZ27 uncharacterized protein LOC111467908 isoform X23.7e-2779.57Show/hide
Query:  RTVQTLYRTAQNRSFTSRLGSSANYSCGVAN---VSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ
        R +QTLYRTAQNR+FTSR+GSSANYSCG+ N   VSQLGIQKT SFLSN+HT FSLA+GHKMII SAVAA+LS+FSH  GIRL TTQAKAPPQ
Subjt:  RTVQTLYRTAQNRSFTSRLGSSANYSCGVAN---VSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSH--GIRLVTTQAKAPPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCAGAAGCTTGCGCACAGTCCAAACTTTGTATCGCACAGCACAGAATCGATCATTTACTTCTAGGCTTGGAAGTTCAGCAAACTATTCTTGCGGTGTTGCAAA
TGTTAGTCAATTGGGTATCCAGAAAACTTCTTCTTTCCTCAGTAACAGTCACACTACTTTTTCACTGGCTCAGGGACATAAAATGATAATAAGTTCTGCAGTGGCTGCTG
AGTTGTCAATGTTCTCACATGGCATTAGGTTGGTGACAACACAAGCAAAAGCCCCTCCACAAATTATGACAATTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCAGAAGCTTGCGCACAGTCCAAACTTTGTATCGCACAGCACAGAATCGATCATTTACTTCTAGGCTTGGAAGTTCAGCAAACTATTCTTGCGGTGTTGCAAA
TGTTAGTCAATTGGGTATCCAGAAAACTTCTTCTTTCCTCAGTAACAGTCACACTACTTTTTCACTGGCTCAGGGACATAAAATGATAATAAGTTCTGCAGTGGCTGCTG
AGTTGTCAATGTTCTCACATGGCATTAGGTTGGTGACAACACAAGCAAAAGCCCCTCCACAAATTATGACAATTGCTTGA
Protein sequenceShow/hide protein sequence
MNFRSLRTVQTLYRTAQNRSFTSRLGSSANYSCGVANVSQLGIQKTSSFLSNSHTTFSLAQGHKMIISSAVAAELSMFSHGIRLVTTQAKAPPQIMTIA