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Lag0036107 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036107
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr3:39084568..39084965
RNA-Seq ExpressionLag0036107
SyntenyLag0036107
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131660.1 uncharacterized protein LOC111004785 [Momordica charantia]9.5e-1236.07Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG   +  V+GA+ +LRG   +WW  V   EDH+++P    R +D                      ++GS+++ QYER+F EL R  ++ +
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIRELV
         TE  +I +F++GLRREI+ L+
Subjt:  ATEPRRIGRFINGLRREIRELV

XP_022156172.1 uncharacterized protein LOC111023126 [Momordica charantia]1.6e-1136.89Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL  YLG   +  V+GA+ +LRG T +WW  V   EDH ++P    R +D                      ++GS+++ QYER+F EL R  ++ +
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIRELV
         T+  +I +FI+GLRREI+ L+
Subjt:  ATEPRRIGRFINGLRREIRELV

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]4.7e-1137.82Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG + Q  V+GA+ +LRG   +WW+ V   ED+++ P    R ++                       +G++S+ QYER+F EL R  LEL+
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIR
         TE  +I RF+ GLR+ IR
Subjt:  ATEPRRIGRFINGLRREIR

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]3.6e-1137.7Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG      V+GA+ +LRG   +WW  V   EDH++ P    R +D                      ++GS+++ QYER+F EL R   + V
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIRELV
         TE  +I +FI+GLRREI+ L+
Subjt:  ATEPRRIGRFINGLRREIRELV

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]5.6e-1238.66Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG + Q  V+GA+ +LRG   +WW+ V   EDH++ P    R +D                      S+G++++ QYER+F EL R   EL+
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIR
         TE  +I RF+ GLR+ IR
Subjt:  ATEPRRIGRFINGLRREIR

TrEMBL top hitse value%identityAlignment
A0A6J1BQB2 uncharacterized protein LOC1110047854.6e-1236.07Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG   +  V+GA+ +LRG   +WW  V   EDH+++P    R +D                      ++GS+++ QYER+F EL R  ++ +
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIRELV
         TE  +I +F++GLRREI+ L+
Subjt:  ATEPRRIGRFINGLRREIRELV

A0A6J1DQ01 uncharacterized protein LOC1110232502.7e-1238.66Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG + Q  V+GA+ +LRG   +WW+ V   EDH++ P    R +D                      S+G++++ QYER+F EL R   EL+
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIR
         TE  +I RF+ GLR+ IR
Subjt:  ATEPRRIGRFINGLRREIR

A0A6J1DQB9 Reverse transcriptase1.7e-1137.7Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG      V+GA+ +LRG   +WW  V   EDH++ P    R +D                      ++GS+++ QYER+F EL R   + V
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIRELV
         TE  +I +FI+GLRREI+ L+
Subjt:  ATEPRRIGRFINGLRREIRELV

A0A6J1DRB3 uncharacterized protein LOC1110231267.9e-1236.89Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL  YLG   +  V+GA+ +LRG T +WW  V   EDH ++P    R +D                      ++GS+++ QYER+F EL R  ++ +
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIRELV
         T+  +I +FI+GLRREI+ L+
Subjt:  ATEPRRIGRFINGLRREIRELV

A0A6J1DUM2 uncharacterized protein LOC1110232472.3e-1137.82Show/hide
Query:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV
        ELEAL+ YLG + Q  V+GA+ +LRG   +WW+ V   ED+++ P    R ++                       +G++S+ QYER+F EL R  LEL+
Subjt:  ELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSP---CRGQD----------------------SRGSMSIVQYERRFVELFRRVLELV

Query:  ATEPRRIGRFINGLRREIR
         TE  +I RF+ GLR+ IR
Subjt:  ATEPRRIGRFINGLRREIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTAGAGTTGGAAGCCCTATTCCAGTATCTTGGAGCTGATGTTCAACAGTGTGTCCAAGGAGCTATCTTGTTGCTCAGAGGTCACACACACAGCTGGTGGAATCT
AGTGGGCCAGCCTGAGGATCACTCGAGTAGCCCCTGTCGTGGACAAGATTCAAGGGGGAGCATGTCTATAGTGCAATATGAAAGAAGATTTGTTGAGCTGTTTCGTCGTG
TCCTTGAGCTAGTTGCCACCGAGCCAAGGAGAATTGGAAGGTTTATCAATGGCTTGCGTAGAGAAATAAGAGAGTTGGTTAGGCAAGGACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTTAGAGTTGGAAGCCCTATTCCAGTATCTTGGAGCTGATGTTCAACAGTGTGTCCAAGGAGCTATCTTGTTGCTCAGAGGTCACACACACAGCTGGTGGAATCT
AGTGGGCCAGCCTGAGGATCACTCGAGTAGCCCCTGTCGTGGACAAGATTCAAGGGGGAGCATGTCTATAGTGCAATATGAAAGAAGATTTGTTGAGCTGTTTCGTCGTG
TCCTTGAGCTAGTTGCCACCGAGCCAAGGAGAATTGGAAGGTTTATCAATGGCTTGCGTAGAGAAATAAGAGAGTTGGTTAGGCAAGGACCATAG
Protein sequenceShow/hide protein sequence
MTLELEALFQYLGADVQQCVQGAILLLRGHTHSWWNLVGQPEDHSSSPCRGQDSRGSMSIVQYERRFVELFRRVLELVATEPRRIGRFINGLRREIRELVRQGP