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Lag0036110 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036110
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:39174035..39174933
RNA-Seq ExpressionLag0036110
SyntenyLag0036110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]1.2e-1128.74Show/hide
Query:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW
        P   K N + R V +L++ +G W++D + ++F  ++A+ ILN   S     D I W+ DK+G FSV+S YHLA +L  + E SSS  + +    A +  W
Subjt:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW

Query:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV
        +C+                      LE++        +++LW +W  RN+I H    P   + +R +
Subjt:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV

AAQ19327.1 bZIP-like protein [Oryza sativa Japonica Group]4.6e-1128.28Show/hide
Query:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL
        K N + + V +L+ ++G W+   + + F  ++A++ILN   S  S  D I W+ DK G+FSV+S Y LA  L +I+E+SSS   ++++  A  + W+C +
Subjt:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL

Query:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE
         + + I    W   +    + +    + LE++ +C +  R+++++
Subjt:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE

ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]1.2e-1128.74Show/hide
Query:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW
        P   K N + R V +L++ +G W++D + ++F  ++A+ ILN   S     D I W+ DK+G FSV+S YHLA +L  + E SSS  + +    A +  W
Subjt:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW

Query:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV
        +C+                      LE++        +++LW +W  RN+I H    P   + +R +
Subjt:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV

BAH93942.1 Os07g0501200 [Oryza sativa Japonica Group]6.5e-1334.15Show/hide
Query:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW
        P   K N + + V +LLNDNGEW+ + ++++F+ I+ DIIL    S     D + W+ DK G+FSV+S YHLA SL ++   SSS +S   +  A  + W
Subjt:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW

Query:  ECDL-EKAIIILW-----SVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEENDLVEPTSR
         C++ +K  I  W     S+   +NK T        + LE   IC++     +EE D+     R
Subjt:  ECDL-EKAIIILW-----SVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEENDLVEPTSR

XP_025877668.1 uncharacterized protein LOC4351546 [Oryza sativa Japonica Group]4.6e-1128.28Show/hide
Query:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL
        K N + + V +L+ ++G W+   + + F  ++A++ILN   S  S  D I W+ DK G+FSV+S Y LA  L +I+E+SSS   ++++  A  + W+C +
Subjt:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL

Query:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE
         + + I    W   +    + +    + LE++ +C +  R+++++
Subjt:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE

TrEMBL top hitse value%identityAlignment
C7J4L5 Os07g0501200 protein3.1e-1334.15Show/hide
Query:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW
        P   K N + + V +LLNDNGEW+ + ++++F+ I+ DIIL    S     D + W+ DK G+FSV+S YHLA SL ++   SSS +S   +  A  + W
Subjt:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW

Query:  ECDL-EKAIIILW-----SVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEENDLVEPTSR
         C++ +K  I  W     S+   +NK T        + LE   IC++     +EE D+     R
Subjt:  ECDL-EKAIIILW-----SVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEENDLVEPTSR

Q0IPZ9 Os12g0156200 protein2.2e-1128.28Show/hide
Query:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL
        K N + + V +L+ ++G W+   + + F  ++A++ILN   S  S  D I W+ DK G+FSV+S Y LA  L +I+E+SSS   ++++  A  + W+C +
Subjt:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL

Query:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE
         + + I    W   +    + +    + LE++ +C +  R+++++
Subjt:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE

Q33AJ4 Retrotransposon protein, putative, unclassified5.9e-1228.74Show/hide
Query:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW
        P   K N + R V +L++ +G W++D + ++F  ++A+ ILN   S     D I W+ DK+G FSV+S YHLA +L  + E SSS  + +    A +  W
Subjt:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW

Query:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV
        +C+                      LE++        +++LW +W  RN+I H    P   + +R +
Subjt:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV

Q7X970 BZIP-like protein2.2e-1128.28Show/hide
Query:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL
        K N + + V +L+ ++G W+   + + F  ++A++ILN   S  S  D I W+ DK G+FSV+S Y LA  L +I+E+SSS   ++++  A  + W+C +
Subjt:  KDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL

Query:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE
         + + I    W   +    + +    + LE++ +C +  R+++++
Subjt:  EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEE

Q8S5K1 Putative retroelement5.9e-1228.74Show/hide
Query:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW
        P   K N + R V +L++ +G W++D + ++F  ++A+ ILN   S     D I W+ DK+G FSV+S YHLA +L  + E SSS  + +    A +  W
Subjt:  PSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFW

Query:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV
        +C+                      LE++        +++LW +W  RN+I H    P   + +R +
Subjt:  ECD----------------------LEKA--------IIILWSVWEFRNKITHSNIKPDFKLLERAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGTAATGAAGTGCCCTCATTGCTAAAAGATAATCTCAAAGGTCGGCGGGTGTTCGAGCTCCTTAATGATAATGGAGAGTGGAACTCTGATATGGTGAGGGAGAA
CTTCTCTACTATAGAAGCAGACATAATTCTCAACACTCCTACGAGCGGTCCTAGCTCGAGGGACGAAATTATCTGGAATAGAGATAAAATAGGCCTTTTTTCGGTTAAGA
GCACTTATCACCTTGCAACCTCTCTTGAGTCAATCAAAGAAGCTTCCTCATCTAAGGCCTCTTCGTCTCATGTTGAAGATGCCAAGCACATCTTTTGGGAATGTGATCTG
GAAAAGGCTATCATTATTCTGTGGAGTGTATGGGAATTCAGGAACAAGATCACACATTCAAACATCAAGCCAGATTTCAAATTGTTAGAAAGAGCAGTCATTTGCAATCT
AGAGCAAAGGAAATCAAAGGAAGAAAATGACCTGGTTGAGCCTACTAGTCGGCCCTTCAATGGTGAAGAACCTGCCGAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGTAATGAAGTGCCCTCATTGCTAAAAGATAATCTCAAAGGTCGGCGGGTGTTCGAGCTCCTTAATGATAATGGAGAGTGGAACTCTGATATGGTGAGGGAGAA
CTTCTCTACTATAGAAGCAGACATAATTCTCAACACTCCTACGAGCGGTCCTAGCTCGAGGGACGAAATTATCTGGAATAGAGATAAAATAGGCCTTTTTTCGGTTAAGA
GCACTTATCACCTTGCAACCTCTCTTGAGTCAATCAAAGAAGCTTCCTCATCTAAGGCCTCTTCGTCTCATGTTGAAGATGCCAAGCACATCTTTTGGGAATGTGATCTG
GAAAAGGCTATCATTATTCTGTGGAGTGTATGGGAATTCAGGAACAAGATCACACATTCAAACATCAAGCCAGATTTCAAATTGTTAGAAAGAGCAGTCATTTGCAATCT
AGAGCAAAGGAAATCAAAGGAAGAAAATGACCTGGTTGAGCCTACTAGTCGGCCCTTCAATGGTGAAGAACCTGCCGAGTCATGA
Protein sequenceShow/hide protein sequence
MPGNEVPSLLKDNLKGRRVFELLNDNGEWNSDMVRENFSTIEADIILNTPTSGPSSRDEIIWNRDKIGLFSVKSTYHLATSLESIKEASSSKASSSHVEDAKHIFWECDL
EKAIIILWSVWEFRNKITHSNIKPDFKLLERAVICNLEQRKSKEENDLVEPTSRPFNGEEPAES