| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032431.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa] | 1.3e-162 | 36.4 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPK-----QVVPPVG-----------------------QRENLPEN
+ L +RFCRL Y V L +V L S+ + MPPR R GR GRG+G GR P+ Q P Q++ P
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPK-----QVVPPVG-----------------------QRENLPEN
Query: PQVEQPGEQSGPAAQVPQNNEAALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSN
P P S P PQ LS E + +RDFRK++ +FDG+ DPT A LWLSS+ET+FR+M C EDQK+ C VF+L D + WW++ ER +
Subjt: PQVEQPGEQSGPAAQVPQNNEAALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSN
Query: GPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVAELIDRR
+TW Q + F+ K + A+ R K+ EF+ L QG+ TVE+Y+ EF LS F P ++A EA + ++F+ GL+ +IQG V A P +A A+R+A + +
Subjt: GPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVAELIDRR
Query: PSVVSSE-----PSSGYKR-------------------------------------------------RCV-----------------------------
SS+ +SG KR RC+
Subjt: PSVVSSE-----PSSGYKR-------------------------------------------------RCV-----------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGY
PE+L GLPP V+F IELEP T PIS+APYRM PAELKELKVQ+QELLDKG+
Subjt: -----------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGY
Query: IRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTSF---------HGLDE
IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDLRSGYHQLRI++ D+ KT FR+ + GL
Subjt: IRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTSF---------HGLDE
Query: Q----------------------------------------------------------------------GHVVLKQGVTVDPAKIEEVTNWSRPTSVS
GHVV K GV+VDPAKIE VT W+RP++VS
Subjt: Q----------------------------------------------------------------------GHVVLKQGVTVDPAKIEEVTNWSRPTSVS
Query: EIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVL
E+RSFLGLAGYY RFV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTVPDGSG FVIYS+ASKKGLGCVLM
Subjt: EIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVL
Query: QQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLT
QQ K+V Y S QLK +E+NY T
Subjt: QQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLT
Query: HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALITTQAHILDDLERAEI
HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FT KELNMRQRRWLELVKDY C+I YH GKANVVADALSRK +H +ALIT QA + D+ERAEI
Subjt: HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALITTQAHILDDLERAEI
Query: MIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEA
+VG VT +LAQLTV+ +LRQRII Q +DP LV KR EA
Subjt: MIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEA
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| KAA0040695.1 pol protein [Cucumis melo var. makuwa] | 7.6e-163 | 35.99 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
+ L +RFCRL Y V + +V L S+ + MPPR R GR GRGRG GR P+ V PV Q + P P + Q EQ PA
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
Query: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
+ P + A LS E + +RDFRK++ +FDG+ DPT A++WLSS+ET+FR+M C EDQKV C VF+L D WW+
Subjt: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
Query: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
+ ER + +TW QF+ F+ K + A+ R KQ EF+ L QG+ TVE+Y+ EF LS F P ++A EA + ++F+ GL+ +IQG V A P +A A
Subjt: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
Query: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
+R+A + + SS+ +SG KR RC+
Subjt: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------PEDLTGLPPAGVVDFCIEL
P++L GLPP V+F IEL
Subjt: ---------------------------------------------------------------------------------PEDLTGLPPAGVVDFCIEL
Query: EPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSG
EP T PIS+APYRMAPAELKELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FS+IDLRSG
Subjt: EPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSG
Query: YHQLRIREDDISKTAFRTSF---------HGLDEQ-----------------------------------------------------------------
YHQLRI+++D+ KTAFR+ + GL
Subjt: YHQLRIREDDISKTAFRTSF---------HGLDEQ-----------------------------------------------------------------
Query: -----GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSG
GHVV K GV+VDPAKIE VT W+RP++VSE+RSFLGLAGYY +FV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTV DGSG
Subjt: -----GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSG
Query: EFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRD
FVIYS+ASKKGLGCVLM QQ
Subjt: EFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRD
Query: IKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGK
K+V Y S QLK +E+NY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDY C+I YH GK
Subjt: IKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGK
Query: ANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
ANVVADALSRK +H +ALIT QA + DLERAEI ++VG VT +LAQLTV+ +LRQRIID Q +DP LV KR EAG
Subjt: ANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| KAA0046094.1 gag protease polyprotein [Cucumis melo var. makuwa] | 2.2e-162 | 36.13 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
+ L +RF RL Y V L +V L S+ + MPPR R GR GRGRG GR P+ V PV Q + P P + Q EQ PA
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
Query: AQVPQNNEA-------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIER
+ P A LS E + +RDFRK++ +FDG+ DPT A++WLSS+ET+FR+M C EDQKV C VF+L D WW++ ER
Subjt: AQVPQNNEA-------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIER
Query: TIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVA
+ +TW QF+ F+ K + A+ R K+ EF+ L QG+ TVE+Y+ EF LS F P ++A EA +V++F+ GL+ +IQG V A P +A A+R+A
Subjt: TIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVA
Query: ELIDRRPSVVSSE-----PSSGYKR----------------------------------------------RC---------------------------
+ + SS+ +SG KR RC
Subjt: ELIDRRPSVVSSE-----PSSGYKR----------------------------------------------RC---------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------VPEDLTGLPPAGVVDFCIE
PE+L GLPP V+F IE
Subjt: ---------------------------------------------------------------------------------VPEDLTGLPPAGVVDFCIE
Query: LEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRS
LEP T PIS+APYRMAPAELKELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDLRS
Subjt: LEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRS
Query: GYHQLRIREDDISKTAFRTSF---------HGLDEQ----------------------------------------------------------------
GYHQLRI+++D+ KTAF + + GL
Subjt: GYHQLRIREDDISKTAFRTSF---------HGLDEQ----------------------------------------------------------------
Query: ------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGS
GHVV K GV+VDPAKIE VT W+RP++VSE+RSFLGLAGYY RFV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTVPDGS
Subjt: ------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGS
Query: GEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDR
G FVIYS+ASKKGLGCVLM QQ
Subjt: GEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDR
Query: DIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLG
K+V Y S QLK +E+NY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDY C+I YH G
Subjt: DIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLG
Query: KANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
KANVVADALSRK +H +ALIT QA + DLER EI ++VG VT +LAQLTV+ +LRQRIID Q +DP LV KR EAG
Subjt: KANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| KAA0058399.1 pol protein [Cucumis melo var. makuwa] | 1.1e-166 | 36.84 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
+ L +RFCRL Y V L +V L S+ + MPPR R GR GRGRG GR P+ V PV Q + P P + Q EQ PA
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
Query: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
+ P A LS E + +RDFRK++ +FDG+ DPT A++WLSS+ET+FR+M C EDQK+ C VF+L D WW+
Subjt: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
Query: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
+ ER + +TW QF+ F+ K + A+ R K+ EF+ L QG+ TVE+Y+ EF LS F P ++A EA + ++F+ GL+ +IQG V A P +A A
Subjt: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
Query: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
+R+A + + SS+ +SG KR RC+
Subjt: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAEL
PE+L GLPP V+F IELEP T PIS+APYRMAPAEL
Subjt: --------------------------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAEL
Query: KELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS
KELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDLRSGYHQLRI+++D+ KTAFR+
Subjt: KELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS
Query: F---------HGLDEQ----------------------------------------------------------------------GHVVLKQGVTVDPA
+ GL GHVV K GV+VDPA
Subjt: F---------HGLDEQ----------------------------------------------------------------------GHVVLKQGVTVDPA
Query: KIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMH
KIE VT W+RP++VSE+RSFLGLAGYY RFV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTVPDGSG FVIYS+ASKKGLGCVLM
Subjt: KIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMH
Query: HDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNT
QQ K+V
Subjt: HDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNT
Query: YVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALI
Y S QLK +EKNY THDLELAAVVFALKIWRHYLYGE IQIFTDHKSLKY FTQKELNMRQRRWLELVKDY C+I YH GKANVVADALSRK +H +ALI
Subjt: YVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALI
Query: TTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
T QA + DLERAEI ++VG VT +LAQLTV+ +LRQRIID Q +DP LV KR EAG
Subjt: TTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| KAA0061201.1 pol protein [Cucumis melo var. makuwa] | 2.6e-163 | 38.45 | Show/hide |
Query: MPPR---ARGRGKGRGRGRGRGRTTPKQVVPPVGQRENLPEN--PQVEQPGEQSGPAAQVP----QNNEAA---------------------LSWETRCI
MPPR RG G+G GRG GRG+ V P V + + +EQ + AA P Q N+AA LS E + +
Subjt: MPPR---ARGRGKGRGRGRGRGRTTPKQVVPPVGQRENLPEN--PQVEQPGEQSGPAAQVP----QNNEAA---------------------LSWETRCI
Query: RDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVA
RDFRK++ +FDG+ +PT A++WL+SIET+FR+M C EDQKV C VF L D WW++ ER + +TW QF+ F+ K + A + K EF+
Subjt: RDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVA
Query: LTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRV--------------------------------------
L QG+ TVE+Y+ EF LS FTP +V EA + E+F+ GL+ ++QG V A P +A A+R+
Subjt: LTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRV--------------------------------------
Query: --------------------------AELIDRRP----------------------------------------------------SVVSS---------
A++ R+P S +SS
Subjt: --------------------------AELIDRRP----------------------------------------------------SVVSS---------
Query: -------------------------------------------EPSSG--YKRR-----CV---------------------------------------
P SG +K R C+
Subjt: -------------------------------------------EPSSG--YKRR-----CV---------------------------------------
Query: --------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------IDDLFDQLQGAAMFSKIDL
P++L GLPP VDF IELE T PIS+APYRMAPAELKELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDL
Subjt: --------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------IDDLFDQLQGAAMFSKIDL
Query: RSGYHQLRIREDDISKTAFRTSFHGLDE------------------------------------------------------------------------
RSGYHQLRIR+ DI KTAFR S +G DE
Subjt: RSGYHQLRIREDDISKTAFRTSFHGLDE------------------------------------------------------------------------
Query: --------QGHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVP
GHVV +GV+VDPAKIE VTNW RP++VSEIRSFLGLAGYY RFV+ FS I +PLTQLTRKG F+W+ ACE SFQELKQ+LV+APVLTVP
Subjt: --------QGHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVP
Query: DGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNID
DGSG FVIYS+ASKKGLGCVLM QQ
Subjt: DGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNID
Query: LDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQY
K+V Y S QLK +E+NY THDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKY FTQKELNMRQRRWLELVKDY C+I Y
Subjt: LDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQY
Query: HLGKANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
H GKAN+VADALSRK AH +ALIT Q +L D ERAEI ++VG+VTA+LAQL+V+ +LRQ+II Q +DP L KR VE G
Subjt: HLGKANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SSA3 Reverse transcriptase | 6.3e-163 | 36.4 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPK-----QVVPPVG-----------------------QRENLPEN
+ L +RFCRL Y V L +V L S+ + MPPR R GR GRG+G GR P+ Q P Q++ P
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPK-----QVVPPVG-----------------------QRENLPEN
Query: PQVEQPGEQSGPAAQVPQNNEAALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSN
P P S P PQ LS E + +RDFRK++ +FDG+ DPT A LWLSS+ET+FR+M C EDQK+ C VF+L D + WW++ ER +
Subjt: PQVEQPGEQSGPAAQVPQNNEAALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSN
Query: GPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVAELIDRR
+TW Q + F+ K + A+ R K+ EF+ L QG+ TVE+Y+ EF LS F P ++A EA + ++F+ GL+ +IQG V A P +A A+R+A + +
Subjt: GPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVAELIDRR
Query: PSVVSSE-----PSSGYKR-------------------------------------------------RCV-----------------------------
SS+ +SG KR RC+
Subjt: PSVVSSE-----PSSGYKR-------------------------------------------------RCV-----------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGY
PE+L GLPP V+F IELEP T PIS+APYRM PAELKELKVQ+QELLDKG+
Subjt: -----------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGY
Query: IRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTSF---------HGLDE
IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDLRSGYHQLRI++ D+ KT FR+ + GL
Subjt: IRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTSF---------HGLDE
Query: Q----------------------------------------------------------------------GHVVLKQGVTVDPAKIEEVTNWSRPTSVS
GHVV K GV+VDPAKIE VT W+RP++VS
Subjt: Q----------------------------------------------------------------------GHVVLKQGVTVDPAKIEEVTNWSRPTSVS
Query: EIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVL
E+RSFLGLAGYY RFV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTVPDGSG FVIYS+ASKKGLGCVLM
Subjt: EIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVL
Query: QQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLT
QQ K+V Y S QLK +E+NY T
Subjt: QQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLT
Query: HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALITTQAHILDDLERAEI
HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKY FT KELNMRQRRWLELVKDY C+I YH GKANVVADALSRK +H +ALIT QA + D+ERAEI
Subjt: HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALITTQAHILDDLERAEI
Query: MIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEA
+VG VT +LAQLTV+ +LRQRII Q +DP LV KR EA
Subjt: MIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEA
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| A0A5A7TGX4 Reverse transcriptase | 3.7e-163 | 35.99 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
+ L +RFCRL Y V + +V L S+ + MPPR R GR GRGRG GR P+ V PV Q + P P + Q EQ PA
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
Query: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
+ P + A LS E + +RDFRK++ +FDG+ DPT A++WLSS+ET+FR+M C EDQKV C VF+L D WW+
Subjt: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
Query: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
+ ER + +TW QF+ F+ K + A+ R KQ EF+ L QG+ TVE+Y+ EF LS F P ++A EA + ++F+ GL+ +IQG V A P +A A
Subjt: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
Query: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
+R+A + + SS+ +SG KR RC+
Subjt: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------PEDLTGLPPAGVVDFCIEL
P++L GLPP V+F IEL
Subjt: ---------------------------------------------------------------------------------PEDLTGLPPAGVVDFCIEL
Query: EPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSG
EP T PIS+APYRMAPAELKELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FS+IDLRSG
Subjt: EPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSG
Query: YHQLRIREDDISKTAFRTSF---------HGLDEQ-----------------------------------------------------------------
YHQLRI+++D+ KTAFR+ + GL
Subjt: YHQLRIREDDISKTAFRTSF---------HGLDEQ-----------------------------------------------------------------
Query: -----GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSG
GHVV K GV+VDPAKIE VT W+RP++VSE+RSFLGLAGYY +FV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTV DGSG
Subjt: -----GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSG
Query: EFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRD
FVIYS+ASKKGLGCVLM QQ
Subjt: EFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRD
Query: IKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGK
K+V Y S QLK +E+NY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDY C+I YH GK
Subjt: IKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGK
Query: ANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
ANVVADALSRK +H +ALIT QA + DLERAEI ++VG VT +LAQLTV+ +LRQRIID Q +DP LV KR EAG
Subjt: ANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| A0A5A7TSQ8 Reverse transcriptase | 1.1e-162 | 36.13 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
+ L +RF RL Y V L +V L S+ + MPPR R GR GRGRG GR P+ V PV Q + P P + Q EQ PA
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
Query: AQVPQNNEA-------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIER
+ P A LS E + +RDFRK++ +FDG+ DPT A++WLSS+ET+FR+M C EDQKV C VF+L D WW++ ER
Subjt: AQVPQNNEA-------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIER
Query: TIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVA
+ +TW QF+ F+ K + A+ R K+ EF+ L QG+ TVE+Y+ EF LS F P ++A EA +V++F+ GL+ +IQG V A P +A A+R+A
Subjt: TIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRVA
Query: ELIDRRPSVVSSE-----PSSGYKR----------------------------------------------RC---------------------------
+ + SS+ +SG KR RC
Subjt: ELIDRRPSVVSSE-----PSSGYKR----------------------------------------------RC---------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------VPEDLTGLPPAGVVDFCIE
PE+L GLPP V+F IE
Subjt: ---------------------------------------------------------------------------------VPEDLTGLPPAGVVDFCIE
Query: LEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRS
LEP T PIS+APYRMAPAELKELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDLRS
Subjt: LEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRS
Query: GYHQLRIREDDISKTAFRTSF---------HGLDEQ----------------------------------------------------------------
GYHQLRI+++D+ KTAF + + GL
Subjt: GYHQLRIREDDISKTAFRTSF---------HGLDEQ----------------------------------------------------------------
Query: ------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGS
GHVV K GV+VDPAKIE VT W+RP++VSE+RSFLGLAGYY RFV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTVPDGS
Subjt: ------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGS
Query: GEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDR
G FVIYS+ASKKGLGCVLM QQ
Subjt: GEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDR
Query: DIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLG
K+V Y S QLK +E+NY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDY C+I YH G
Subjt: DIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLG
Query: KANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
KANVVADALSRK +H +ALIT QA + DLER EI ++VG VT +LAQLTV+ +LRQRIID Q +DP LV KR EAG
Subjt: KANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| A0A5A7UY04 Reverse transcriptase | 5.5e-167 | 36.84 | Show/hide |
Query: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
+ L +RFCRL Y V L +V L S+ + MPPR R GR GRGRG GR P+ V PV Q + P P + Q EQ PA
Subjt: RGLGYRFCRLVYIVDLRYVH-GLSTSIRSRQIMPPRARGRGKGR-GRGRGRGRTTPKQVVPPVGQRENLPENP---------------QVEQPGEQSGPA
Query: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
+ P A LS E + +RDFRK++ +FDG+ DPT A++WLSS+ET+FR+M C EDQK+ C VF+L D WW+
Subjt: AQVPQNNEA-----------------------ALSWETRCIRDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQ
Query: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
+ ER + +TW QF+ F+ K + A+ R K+ EF+ L QG+ TVE+Y+ EF LS F P ++A EA + ++F+ GL+ +IQG V A P +A A
Subjt: SIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVALTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATA
Query: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
+R+A + + SS+ +SG KR RC+
Subjt: VRVAELIDRRPSVVSSE-----PSSGYKR-------------------------------------------------RCV-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAEL
PE+L GLPP V+F IELEP T PIS+APYRMAPAEL
Subjt: --------------------------------------------------------------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAEL
Query: KELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS
KELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDLRSGYHQLRI+++D+ KTAFR+
Subjt: KELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------IDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS
Query: F---------HGLDEQ----------------------------------------------------------------------GHVVLKQGVTVDPA
+ GL GHVV K GV+VDPA
Subjt: F---------HGLDEQ----------------------------------------------------------------------GHVVLKQGVTVDPA
Query: KIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMH
KIE VT W+RP++VSE+RSFLGLAGYY RFV+ FS I PLTQLTRKG F+W++ACE SFQ LKQ+LV+APVLTVPDGSG FVIYS+ASKKGLGCVLM
Subjt: KIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMH
Query: HDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNT
QQ K+V
Subjt: HDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNT
Query: YVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALI
Y S QLK +EKNY THDLELAAVVFALKIWRHYLYGE IQIFTDHKSLKY FTQKELNMRQRRWLELVKDY C+I YH GKANVVADALSRK +H +ALI
Subjt: YVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYHLGKANVVADALSRKTAHVSALI
Query: TTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
T QA + DLERAEI ++VG VT +LAQLTV+ +LRQRIID Q +DP LV KR EAG
Subjt: TTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| A0A5A7V5X5 Pol protein | 1.3e-163 | 38.45 | Show/hide |
Query: MPPR---ARGRGKGRGRGRGRGRTTPKQVVPPVGQRENLPEN--PQVEQPGEQSGPAAQVP----QNNEAA---------------------LSWETRCI
MPPR RG G+G GRG GRG+ V P V + + +EQ + AA P Q N+AA LS E + +
Subjt: MPPR---ARGRGKGRGRGRGRGRTTPKQVVPPVGQRENLPEN--PQVEQPGEQSGPAAQVP----QNNEAA---------------------LSWETRCI
Query: RDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVA
RDFRK++ +FDG+ +PT A++WL+SIET+FR+M C EDQKV C VF L D WW++ ER + +TW QF+ F+ K + A + K EF+
Subjt: RDFRKWDLCSFDGASRDPTVAELWLSSIETVFRHMNCLEDQKVYCVVFLLRDNALIWWQSIERTIDVSNGPVTWTQFRGEFFRKCYPAASRFKKQAEFVA
Query: LTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRV--------------------------------------
L QG+ TVE+Y+ EF LS FTP +V EA + E+F+ GL+ ++QG V A P +A A+R+
Subjt: LTQGNRTVEEYETEFTRLSLFTPALVAVEADKVERFIPGLKEEIQGSVAAHEPQDYATAVRV--------------------------------------
Query: --------------------------AELIDRRP----------------------------------------------------SVVSS---------
A++ R+P S +SS
Subjt: --------------------------AELIDRRP----------------------------------------------------SVVSS---------
Query: -------------------------------------------EPSSG--YKRR-----CV---------------------------------------
P SG +K R C+
Subjt: -------------------------------------------EPSSG--YKRR-----CV---------------------------------------
Query: --------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------IDDLFDQLQGAAMFSKIDL
P++L GLPP VDF IELE T PIS+APYRMAPAELKELKVQ+QELLDKG+IRPSVSPWGAPVL IDDLFDQLQGA +FSKIDL
Subjt: --------PEDLTGLPPAGVVDFCIELEPETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------IDDLFDQLQGAAMFSKIDL
Query: RSGYHQLRIREDDISKTAFRTSFHGLDE------------------------------------------------------------------------
RSGYHQLRIR+ DI KTAFR S +G DE
Subjt: RSGYHQLRIREDDISKTAFRTSFHGLDE------------------------------------------------------------------------
Query: --------QGHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVP
GHVV +GV+VDPAKIE VTNW RP++VSEIRSFLGLAGYY RFV+ FS I +PLTQLTRKG F+W+ ACE SFQELKQ+LV+APVLTVP
Subjt: --------QGHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVP
Query: DGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNID
DGSG FVIYS+ASKKGLGCVLM QQ
Subjt: DGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNID
Query: LDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQY
K+V Y S QLK +E+NY THDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKY FTQKELNMRQRRWLELVKDY C+I Y
Subjt: LDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQY
Query: HLGKANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
H GKAN+VADALSRK AH +ALIT Q +L D ERAEI ++VG+VTA+LAQL+V+ +LRQ+II Q +DP L KR VE G
Subjt: HLGKANVVADALSRKTAHVSALITTQAHILDDLERAEIMIAVGKVTARLAQLTVKSSLRQRIIDEQPSDPDLVVKRNQVEAG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 7.2e-23 | 22.25 | Show/hide |
Query: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLIDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS--------------
E+ I+ P P + L++ + Y++P++ P LI+ L ++QG+ +F+K+DL+S YH +R+R+ D K AFR
Subjt: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLIDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS--------------
Query: ------------------------------FHGLDEQGHV-----------------------------------VLKQGVTVDPAKIEEVTNWSRPTSV
H E HV + ++G T I++V W +P +
Subjt: ------------------------------FHGLDEQGHV-----------------------------------VLKQGVTVDPAKIEEVTNWSRPTSV
Query: SEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSV
E+R FLG Y +F+ S + PL L +K + W + + +KQ LVS PVL D S + ++ ++AS +G VL
Subjt: SEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSV
Query: LQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYL
SQ+ D +++ Y P Y S ++ + NY
Subjt: LQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYL
Query: THDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYGCDIQYHLGKANVVADALSR
D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D+ +I Y G AN +ADALSR
Subjt: THDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYGCDIQYHLGKANVVADALSR
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| P0CT41 Transposon Tf2-12 polyprotein | 7.2e-23 | 22.25 | Show/hide |
Query: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLIDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS--------------
E+ I+ P P + L++ + Y++P++ P LI+ L ++QG+ +F+K+DL+S YH +R+R+ D K AFR
Subjt: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLIDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS--------------
Query: ------------------------------FHGLDEQGHV-----------------------------------VLKQGVTVDPAKIEEVTNWSRPTSV
H E HV + ++G T I++V W +P +
Subjt: ------------------------------FHGLDEQGHV-----------------------------------VLKQGVTVDPAKIEEVTNWSRPTSV
Query: SEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSV
E+R FLG Y +F+ S + PL L +K + W + + +KQ LVS PVL D S + ++ ++AS +G VL
Subjt: SEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSV
Query: LQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYL
SQ+ D +++ Y P Y S ++ + NY
Subjt: LQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYL
Query: THDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYGCDIQYHLGKANVVADALSR
D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D+ +I Y G AN +ADALSR
Subjt: THDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYGCDIQYHLGKANVVADALSR
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.0e-24 | 21.28 | Show/hide |
Query: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------------IDDLFDQLQGAAMFSKID
+ P+ YR ++++E++ Q+Q+L+ + PSVS + +P+L IDD+ DQL A FS +D
Subjt: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVL-------------------------------------IDDLFDQLQGAAMFSKID
Query: LRSGYHQLRIREDDISKTAFRTS---------------------------FHGLDEQ-------------------------------------------
L SG+HQ+ + E T+F TS F G++
Subjt: LRSGYHQLRIREDDISKTAFRTS---------------------------FHGLDEQ-------------------------------------------
Query: ---------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVP
GH +G+ D K + + N+ P R F+ YY RF++ F+ +T+L +K F W + C+ +F LK +L++ +L P
Subjt: ---------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVP
Query: DGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNID
D S EF I ++ASK+ G VL
Subjt: DGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNID
Query: LDRDIKLVNLHENQLYSGEE-PNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQ
Q ++G + P Y S E N T + ELAA+ +A+ +R Y+YG+ + TDH+ L YLF+ + + R +++Y ++
Subjt: LDRDIKLVNLHENQLYSGEE-PNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQ
Query: YHLGKANVVADALSRKT
Y GK N VADALSR T
Subjt: YHLGKANVVADALSRKT
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.2e-29 | 23.78 | Show/hide |
Query: NPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLI------------------------------------DDLFDQLQGAAMFSKIDLRS
+PI Y +A E++ Q+QE+L++G IR S SP+ +P + D++ +L F+ IDL
Subjt: NPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLI------------------------------------DDLFDQLQGAAMFSKIDLRS
Query: GYHQLRIREDDISKTAFRT-SFH---------------------------------------------GLDEQ---------------------------
G+HQ+ + E+ ISKTAF T S H L E
Subjt: GYHQLRIREDDISKTAFRT-SFH---------------------------------------------GLDEQ---------------------------
Query: ------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWN--EACEASFQELKQRLVSAPVLTVPD
GH+V G+ +P K++ + ++ PT EIR+FLGL GYY +F+ ++ I P+T +K T E EA F++LK ++ P+L +PD
Subjt: ------GHVVLKQGVTVDPAKIEEVTNWSRPTSVSEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWN--EACEASFQELKQRLVSAPVLTVPD
Query: GSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDL
+FV+ ++AS LG VL QN H
Subjt: GSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSVLQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDL
Query: DRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYH
P +++S L D+E NY + EL A+V+A K +RHYL G + I +DH+ L++L KE + RW + +Y I Y
Subjt: DRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYLTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYGCDIQYH
Query: LGKANVVADALSR
GK N VADALSR
Subjt: LGKANVVADALSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 7.2e-23 | 22.25 | Show/hide |
Query: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLIDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS--------------
E+ I+ P P + L++ + Y++P++ P LI+ L ++QG+ +F+K+DL+S YH +R+R+ D K AFR
Subjt: ETNPISKAPYRMAPAELKELKVQIQELLDKGYIRPSVSPWGAPVLIDDLFDQLQGAAMFSKIDLRSGYHQLRIREDDISKTAFRTS--------------
Query: ------------------------------FHGLDEQGHV-----------------------------------VLKQGVTVDPAKIEEVTNWSRPTSV
H E HV + ++G T I++V W +P +
Subjt: ------------------------------FHGLDEQGHV-----------------------------------VLKQGVTVDPAKIEEVTNWSRPTSV
Query: SEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSV
E+R FLG Y +F+ S + PL L +K + W + + +KQ LVS PVL D S + ++ ++AS +G VL
Subjt: SEIRSFLGLAGYYHRFVQGFSSIVAPLTQLTRKGTSFLWNEACEASFQELKQRLVSAPVLTVPDGSGEFVIYSNASKKGLGCVLMHHDYAARRLEEANSV
Query: LQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYL
SQ+ D +++ Y P Y S ++ + NY
Subjt: LQQNWEQNCHITTRAYRSQRRDAATLASRRCVISLTETRVLKAASRRCLDSVSTLRRKKQNIDLDRDIKLVNLHENQLYSGEEPNTYVSHQLKDYEKNYL
Query: THDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYGCDIQYHLGKANVVADALSR
D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D+ +I Y G AN +ADALSR
Subjt: THDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYGCDIQYHLGKANVVADALSR
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