; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036125 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036125
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:39617479..39619011
RNA-Seq ExpressionLag0036125
SyntenyLag0036125
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]2.1e-3942.36Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAI
        MEI+   LL++P RM     +R K + CLFHRDH H+T++C  LK E++ L                               T  GGP      RKRKA 
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAI

Query:  DREARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTP
         RE R+      +Y   ++K    +EF+E EAT +  PHND LV+TL ++N K+HRIL+DGGSSAD++SLTA+KAM L     K S   LV F GERV P
Subjt:  DREARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTP

Query:  EGSIELPMTFGNGQHAVTKIINFLVVDFS
        EG  EL +TFG+G  ++T I++FLV+D++
Subjt:  EGSIELPMTFGNGQHAVTKIINFLVVDFS

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]5.4e-4047.98Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE
        MEI++  LLK+P RMK    +R K Q  LFHRDHGH+T++C  LK+E+E L  +G         K    + E  S    R + ++ + +    LEF+E E
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE

Query:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS
        AT +  PHNDALV+TL ++N K+HRIL+DGGSS  ++SLTA+KAM L  + LK S  PLVGF GERV PEG IELP+ FG+G  ++ K+++FLVV ++
Subjt:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]5.4e-4851.52Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE
        MEI++  LLK+P RMK    +R K + CLFHRDH H+T++C  LK+E+E L   G         K+KA  REAR+  E   +Y  +++     +EF+E E
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE

Query:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS
        AT +   HNDALV+TL ++NVK+HRIL+DGGSSAD++S TA+KAM LE ++LK S  PLVGF GERV  EG IELP+TFG+G   VTK+++FLVV+++
Subjt:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.9e-4044.19Show/hide
Query:  MKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAIDREARSEPEYRGMY
        MK   ++R K + CLFHRDHGH+T++C  LK+E+E L                               T  GGP      +KRKA  +EAR+ P Y  +Y
Subjt:  MKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAIDREARSEPEYRGMY

Query:  SVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQ
            +     ++F+E E T +  PHNDALV+TL ++N K+HRIL+DGGSS  ++SLTA+KAM L  + LK +L PLVGF GERV  +  I+LP+TFGNG 
Subjt:  SVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQ

Query:  HAVTKIINFLVVDFS
          +TKI+ FLVVD+S
Subjt:  HAVTKIINFLVVDFS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.9e-4344.44Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL------------------------------THNGGPAGGGSSRKRKAID
        MEI++  LLK+P RMK S  +R K + CLFHRDHGH+T++C  LK+E+E L                              T  GGP    S RKRKA  
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL------------------------------THNGGPAGGGSSRKRKAID

Query:  REARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPE
        REAR+  E   +Y  + +     +EF+E EAT +  PHNDALV+ L ++NVK+HR+L+DGGSSAD++S TA+KAM L  ++LK S  PLVGF  ERV PE
Subjt:  REARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPE

Query:  GSIELPMTFGNGQHAVTKIINFLVVDFSPLKFSI
        G IELP+TFG  +   +K  +  +  + P   SI
Subjt:  GSIELPMTFGNGQHAVTKIINFLVVDFSPLKFSI

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183001.0e-3942.36Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAI
        MEI+   LL++P RM     +R K + CLFHRDH H+T++C  LK E++ L                               T  GGP      RKRKA 
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAI

Query:  DREARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTP
         RE R+      +Y   ++K    +EF+E EAT +  PHND LV+TL ++N K+HRIL+DGGSSAD++SLTA+KAM L     K S   LV F GERV P
Subjt:  DREARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTP

Query:  EGSIELPMTFGNGQHAVTKIINFLVVDFS
        EG  EL +TFG+G  ++T I++FLV+D++
Subjt:  EGSIELPMTFGNGQHAVTKIINFLVVDFS

A0A6J1DP33 uncharacterized protein LOC1110228862.6e-4047.98Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE
        MEI++  LLK+P RMK    +R K Q  LFHRDHGH+T++C  LK+E+E L  +G         K    + E  S    R + ++ + +    LEF+E E
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE

Query:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS
        AT +  PHNDALV+TL ++N K+HRIL+DGGSS  ++SLTA+KAM L  + LK S  PLVGF GERV PEG IELP+ FG+G  ++ K+++FLVV ++
Subjt:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS

A0A6J1DRG9 uncharacterized protein LOC1110235872.6e-4851.52Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE
        MEI++  LLK+P RMK    +R K + CLFHRDH H+T++C  LK+E+E L   G         K+KA  REAR+  E   +Y  +++     +EF+E E
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVE

Query:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS
        AT +   HNDALV+TL ++NVK+HRIL+DGGSSAD++S TA+KAM LE ++LK S  PLVGF GERV  EG IELP+TFG+G   VTK+++FLVV+++
Subjt:  ATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFS

A0A6J1DV51 uncharacterized protein LOC1110246629.0e-4144.19Show/hide
Query:  MKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAIDREARSEPEYRGMY
        MK   ++R K + CLFHRDHGH+T++C  LK+E+E L                               T  GGP      +KRKA  +EAR+ P Y  +Y
Subjt:  MKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL-------------------------------THNGGPAGGGSSRKRKAIDREARSEPEYRGMY

Query:  SVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQ
            +     ++F+E E T +  PHNDALV+TL ++N K+HRIL+DGGSS  ++SLTA+KAM L  + LK +L PLVGF GERV  +  I+LP+TFGNG 
Subjt:  SVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQ

Query:  HAVTKIINFLVVDFS
          +TKI+ FLVVD+S
Subjt:  HAVTKIINFLVVDFS

A0A6J1DWY0 uncharacterized protein LOC1110252933.3e-4344.87Show/hide
Query:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL------------------------------THNGGPAGGGSSRKRKAID
        MEI++  LLK+P RMK S  +R K + CLFHRDHGH+T++C  LK+E+E L                              T  GGP    S RKRKA  
Subjt:  MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEAL------------------------------THNGGPAGGGSSRKRKAID

Query:  REARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPE
        REAR+  E   +Y  + +     +EF+E EAT +  PHNDALV+ L ++NVK+HR+L+DGGSSAD+LS TA+KAM L  ++LK S  PLVGF  ERV PE
Subjt:  REARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHNDALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPE

Query:  GSIELPMTFGNGQHAVTKIINFLVVDFSPLKFSI
        G IELP+TFG  +   +K  +  +  + P   SI
Subjt:  GSIELPMTFGNGQHAVTKIINFLVVDFSPLKFSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCCGAAATGCGGGACTCCTGAAATTCCCAGGGAGGATGAAGTTGAGTGTCGATAGAAGAGACAAGAGCCAGTGTTGCCTTTTCCACCGGGACCATGGGCATTC
AACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGACCCATAATGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAGCTATTGATAGGGAAGCAA
GGTCCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTATCAAAGGCACACCCCCCTTTGGAGTTCACTGAGGTTGAGGCAACAAGCATTCATCAACCACATAATGAT
GCCCTGGTGGTCACTCTAATTGTATCCAATGTGAAAATCCATCGGATCCTAATTGACGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACAGCCTTTAAAGCAATGCAGTT
AGAGAGGGAACTCTTAAAGCTAAGCCTTACCCCGCTTGTAGGATTTGTAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTATGACCTTTGGGAATGGACAAC
ATGCAGTGACAAAGATTATAAACTTCCTAGTTGTGGATTTTTCACCATTAAAGTTCAGTATTCAAAAGTGTGCACAAGGCAACCGACTCAAGCATCAAGATACGCGAGTC
TGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTACATGAGCCTAGACCAAAGAGTCTACCTCACCTCATCTGGCTTGACCATTTTCACATCATGCGATCCTG
GACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGACCATGTGAGCCTGGACCAACGAGTCTATCTCACTTCATCTGGCTTGAACATCTTCACATCAACCGAGCCTGGA
CTACCGAGTCTACCTCGCCTCATCTAGACTTGAGACCGTGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGCATCTTCACATCAGGCTAGCTTGGACT
ACCGAGTCTACCTTGCCTCATCCAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCCGAAATGCGGGACTCCTGAAATTCCCAGGGAGGATGAAGTTGAGTGTCGATAGAAGAGACAAGAGCCAGTGTTGCCTTTTCCACCGGGACCATGGGCATTC
AACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGACCCATAATGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAGCTATTGATAGGGAAGCAA
GGTCCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTATCAAAGGCACACCCCCCTTTGGAGTTCACTGAGGTTGAGGCAACAAGCATTCATCAACCACATAATGAT
GCCCTGGTGGTCACTCTAATTGTATCCAATGTGAAAATCCATCGGATCCTAATTGACGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACAGCCTTTAAAGCAATGCAGTT
AGAGAGGGAACTCTTAAAGCTAAGCCTTACCCCGCTTGTAGGATTTGTAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTATGACCTTTGGGAATGGACAAC
ATGCAGTGACAAAGATTATAAACTTCCTAGTTGTGGATTTTTCACCATTAAAGTTCAGTATTCAAAAGTGTGCACAAGGCAACCGACTCAAGCATCAAGATACGCGAGTC
TGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTACATGAGCCTAGACCAAAGAGTCTACCTCACCTCATCTGGCTTGACCATTTTCACATCATGCGATCCTG
GACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGACCATGTGAGCCTGGACCAACGAGTCTATCTCACTTCATCTGGCTTGAACATCTTCACATCAACCGAGCCTGGA
CTACCGAGTCTACCTCGCCTCATCTAGACTTGAGACCGTGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGCATCTTCACATCAGGCTAGCTTGGACT
ACCGAGTCTACCTTGCCTCATCCAGATTGA
Protein sequenceShow/hide protein sequence
MEIRNAGLLKFPGRMKLSVDRRDKSQCCLFHRDHGHSTRNCIQLKDEIEALTHNGGPAGGGSSRKRKAIDREARSEPEYRGMYSVHLSKAHPPLEFTEVEATSIHQPHND
ALVVTLIVSNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKLSLTPLVGFVGERVTPEGSIELPMTFGNGQHAVTKIINFLVVDFSPLKFSIQKCAQGNRLKHQDTRV
WTTESTSPHPDLRLHEPRPKSLPHLIWLDHFHIMRSWTTESTSPHPDLRPCEPGPTSLSHFIWLEHLHINRAWTTESTSPHLDLRPCEPGPTSLPHLIWLEHLHIRLAWT
TESTLPHPD