CuGenDBv2

Gene ID	Lag0036138
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Gag/pol protein
Genome location	chr3:40020365..40031248
RNA-Seq Expression	Lag0036138
Synteny	Lag0036138
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]

1.5e-107

67.41

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         KTKA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

4.3e-107

66.77

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         K KA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS++QL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L+ +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

5.7e-107

67.09

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         K KA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

5.7e-107

67.09

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         K KA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

1.5e-107

67.41

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         KTKA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

2.7e-107

67.09

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         K KA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

A0A5A7TU93 Gag/pol protein

2.1e-107

66.77

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         K KA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS++QL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L+ +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

A0A5A7V4M1 Gag/pol protein

2.7e-107

67.09

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         K KA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

A0A5D3CPJ6 Gag/pol protein

7.2e-108

67.41

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         KTKA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

A0A5D3CSZ6 Gag/pol protein

7.2e-108

67.41

Show/hide

Query:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ
        V++ Y+RW KAN+K R YILASLS+VLAK+H+ M+T R IM+SL+EMFGQ SYQ+ HDALKY+Y+ RM EG SVREHVL+MMV FNVAE NGAVIDE SQ
Subjt:  VKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQ

Query:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK
        V+FILESLP+SFLQFRSNA+MNKI + LT+LL ELQ ++SL+K KGQ +GEANV  S RKF + S+SGTK + +SS  KK +KKKG +  KA   AAK  
Subjt:  VAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSS--KKTQKKKGNK-RKAPSTAAKNK

Query:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV
         KTKA   KG CFHCN +GHWKRNCPKYL EKKK K+GK+DLLVLETC+VE+D+  WI+DSGATNHVC SFQ  SS+RQL  GEMT+RVGTG V+SA AV
Subjt:  GKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQENSSFRQLNDGEMTLRVGTGEVISAKAV

Query:  GAAKLFFRNRFLLLEN
        G  +L  +  FLLLEN
Subjt:  GAAKLFFRNRFLLLEN

SwissProt top hits

e value

%identity

Alignment

O65569 40S ribosomal protein S11-2

2.2e-05

69.44

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+     + G+GKRPGKGGNRFWK+I L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.7e-06

22.02

Show/hide

Query:  WTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEAN-GAVIDERSQVAFILE
        W   +++    I   LS  +        T RGI   L  ++   +        K +Y+  M EGT+   H L++        AN G  I+E  +   +L 
Subjt:  WTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQPSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEAN-GAVIDERSQVAFILE

Query:  SLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSSKKTQKKKGNKRKAPSTAAKNKGKTKAMVDK
        SLP S+    +  +  K T  L  + + L L + + K                   K  + G   +     ++ ++  N         K+K ++K+ V  
Subjt:  SLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRKFEKDSSSGTKFVATSSKKTQKKKGNKRKAPSTAAKNKGKTKAMVDK

Query:  GKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFD-------------LLVL---ETCV-VEHDEFTWILDSGATNHVCP
          C++CN  GH+KR+CP     K +    K D             +L +   E C+ +   E  W++D+ A++H  P
Subjt:  GKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFD-------------LLVL---ETCV-VEHDEFTWILDSGATNHVCP

P16181 40S ribosomal protein S11-1

2.2e-05

69.44

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+     + G+GKRPGKGGNRFWK+I L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

P17093 40S ribosomal protein S11

7.7e-06

72.22

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+     + G+GKRPGKGGNRFWKSI L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

Q9M5M1 40S ribosomal protein S11

7.7e-06

72.22

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+     + G+GKRPGKGGNRFWKSI L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

Arabidopsis top hits

e value

%identity

Alignment

AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2

1.0e-05

100

Show/hide

Query:  YATASARSDGLLLLCGGRDANSV
        YATASARSDGLLLLCGGRDANSV
Subjt:  YATASARSDGLLLLCGGRDANSV

AT1G08420.2 BRI1 suppressor 1 (BSU1)-like 2

1.0e-05

100

Show/hide

Query:  YATASARSDGLLLLCGGRDANSV
        YATASARSDGLLLLCGGRDANSV
Subjt:  YATASARSDGLLLLCGGRDANSV

AT3G48930.1 Nucleic acid-binding, OB-fold-like protein

1.6e-06

69.44

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+     + G+GKRPGKGGNRFWK+I L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

AT4G30800.1 Nucleic acid-binding, OB-fold-like protein

1.6e-06

69.44

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+     + G+GKRPGKGGNRFWK+I L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

AT5G23740.1 ribosomal protein S11-beta

4.6e-06

69.44

Show/hide

Query:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL
        EKAFLKQPK+       G+GKRPGKGGNRFWK+I L
Subjt:  EKAFLKQPKL----DEIGEGKRPGKGGNRFWKSIEL

Sequences

Show/hide sequences

CDS sequence

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ATGAAGAACGGCGCTGGAAATCAGAAAAACAGAGTGCATAACAGAGGAATCGACGATTTAAGGTTTGCTGGAAAATTTCCCGACCGGGATCCTGACCAAGAAATCGGTCT
GGTTCGGTTTATTTTGCTGGATCAGCCCGATTTTCTGAGTTATTGGCTCGGTTCAGCCAATTTTTGGCATGTTAAGGATGCTTATGACCGCTGGACAAAGGCCAATGATA
AGACTCGCGTCTATATCTTAGCCAGCTTATCTAAAGTTTTGGCTAAAAGGCATGATGGCATGGTAACAGTGAGGGGGATTATGAACTCTCTCCGGGAGATGTTTGGACAA
CCGTCCTACCAACTCCACCATGACGCTCTCAAATACGTTTATAGCTGTCGCATGAAAGAGGGCACGTCTGTTCGGGAGCATGTCCTGGATATGATGGTCCAATTCAACGT
GGCAGAAGCAAACGGGGCGGTCATAGATGAGCGTAGTCAGGTTGCATTCATCTTAGAATCTCTTCCGAAGAGTTTTCTGCAGTTTCGAAGCAATGCAATGATGAATAAAA
TAACATTCAACCTGACTAGCCTCCTGACTGAGCTACAACTCTATCAGTCTCTTCTTAAGAACAAGGGACAGATAGAAGGAGAGGCAAACGTTGTTCACTCTAAAAGAAAG
TTCGAGAAGGATTCATCCTCTGGAACTAAATTTGTAGCCACTTCTTCAAAGAAAACTCAGAAGAAGAAAGGAAACAAGAGGAAAGCTCCCAGTACTGCTGCTAAAAACAA
GGGAAAAACCAAAGCTATGGTAGATAAGGGCAAGTGTTTCCACTGCAATGTAGATGGACATTGGAAGAGAAACTGCCCAAAGTACCTTGTTGAGAAAAAGAAGGAAAAGG
AAGGTAAATTTGATTTACTGGTTTTAGAAACATGTGTGGTAGAACATGATGAGTTTACCTGGATACTTGATTCAGGAGCAACTAATCATGTTTGCCCTTCTTTTCAGGAA
AATAGTTCCTTTCGACAGTTGAATGATGGGGAAATGACACTCAGGGTCGGAACTGGAGAAGTCATTTCAGCTAAAGCAGTGGGAGCTGCGAAGTTATTTTTTAGAAATAG
ATTCTTACTTTTAGAAAATCCACTTAAAAGCTTTCACAGCAGCGACTTCAAGCAGTTGGAAACGTTCACGCCGCCGGAAATCTTCAATCGGTGCCTTCAGATTGGACTTC
AATGTCTTCACATGGATATCACTAGGTATGCAACTGCTAGTGCGCGATCTGATGGTCTTCTATTACTATGTGGAGGGAGAGATGCTAATAGTGTGATGGAGAAGGCTTTT
CTGAAGCAGCCCAAGCTCGACGAAATCGGCGAAGGAAAGAGGCCAGGAAAAGGAGGAAATCGGTTTTGGAAGAGCATTGAATTGTTTCAAAACTTCGAGAGAGGTGATGA
AGATTACTACGAATTGGGTGATGCTGAGGAGGAGGTCTGA

mRNA sequence

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Protein sequence

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MKNGAGNQKNRVHNRGIDDLRFAGKFPDRDPDQEIGLVRFILLDQPDFLSYWLGSANFWHVKDAYDRWTKANDKTRVYILASLSKVLAKRHDGMVTVRGIMNSLREMFGQ
PSYQLHHDALKYVYSCRMKEGTSVREHVLDMMVQFNVAEANGAVIDERSQVAFILESLPKSFLQFRSNAMMNKITFNLTSLLTELQLYQSLLKNKGQIEGEANVVHSKRK
FEKDSSSGTKFVATSSKKTQKKKGNKRKAPSTAAKNKGKTKAMVDKGKCFHCNVDGHWKRNCPKYLVEKKKEKEGKFDLLVLETCVVEHDEFTWILDSGATNHVCPSFQE
NSSFRQLNDGEMTLRVGTGEVISAKAVGAAKLFFRNRFLLLENPLKSFHSSDFKQLETFTPPEIFNRCLQIGLQCLHMDITRYATASARSDGLLLLCGGRDANSVMEKAF
LKQPKLDEIGEGKRPGKGGNRFWKSIELFQNFERGDEDYYELGDAEEEV

Lag0036138 (gene) of Sponge gourd (AG-4) v1 genome