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Lag0036156 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036156
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:40605500..40607976
RNA-Seq ExpressionLag0036156
SyntenyLag0036156
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.2e-2149.12Show/hide
Query:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIRTK
        LGN +G+FEDV+S      WG+ LRVRVR D+ +PL RGIK+NLDGPM G WIPI+YE+LP F      + H+ KDC +      S S+ LQYG W+R +
Subjt:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIRTK

Query:  NFLIFGGHGHRNFS
                GH+N S
Subjt:  NFLIFGGHGHRNFS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.6e-2360.4Show/hide
Query:  LGNVVGVFEDVDSCN--GFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEAL-QYGEWI
        LGN +G F DVD CN  GF  WGASLR+RV IDI++PLRRGIKIN+DGPM G WIPI+YE+LP FC F  +I H S DC   Y  A+  S A  +YG W+
Subjt:  LGNVVGVFEDVDSCN--GFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEAL-QYGEWI

Query:  R
        R
Subjt:  R

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.3e-1650Show/hide
Query:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIR
        LGN +G FE+ D  +    WG++LRVRV +DIS+PLRRGIK+NLDGP+ G+WIPI+YE+LP FC            CG L    + H    QYG W+R
Subjt:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIR

XP_028117212.1 uncharacterized protein LOC114314884 [Camellia sinensis]3.8e-1439.06Show/hide
Query:  SKLSLTSAKEDVSVDADRCAVDRTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHL
        S L L S   DV V            LLGN +G F D++  +G   WG +L +R+ I+I +PLRRG+K+ L G     WI ++YE+LP FC    L+ H 
Subjt:  SKLSLTSAKEDVSVDADRCAVDRTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHL

Query:  SKDCG-ELYKHARSHSEALQYGEWIRTK
          DCG  L + A      LQYG W+R +
Subjt:  SKDCG-ELYKHARSHSEALQYGEWIRTK

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.4e-1337.38Show/hide
Query:  RTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHA-RSHSEALQYG
        +   ++GN VG F D+D  +G   WG ++R+RV +D+ +PLRRG+K+ L       W+  KYE+LP +C F   + H  ++C +    A  S  ++LQYG
Subjt:  RTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHA-RSHSEALQYG

Query:  EWIRTKN
         W+R  N
Subjt:  EWIRTKN

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054812.0e-2149.12Show/hide
Query:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIRTK
        LGN +G+FEDV+S      WG+ LRVRVR D+ +PL RGIK+NLDGPM G WIPI+YE+LP F      + H+ KDC +      S S+ LQYG W+R +
Subjt:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIRTK

Query:  NFLIFGGHGHRNFS
                GH+N S
Subjt:  NFLIFGGHGHRNFS

A0A6J1DU55 uncharacterized protein LOC1110231351.3e-2360.4Show/hide
Query:  LGNVVGVFEDVDSCN--GFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEAL-QYGEWI
        LGN +G F DVD CN  GF  WGASLR+RV IDI++PLRRGIKIN+DGPM G WIPI+YE+LP FC F  +I H S DC   Y  A+  S A  +YG W+
Subjt:  LGNVVGVFEDVDSCN--GFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEAL-QYGEWI

Query:  R
        R
Subjt:  R

A0A6J1DX30 uncharacterized protein LOC1110248742.5e-1650Show/hide
Query:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIR
        LGN +G FE+ D  +    WG++LRVRV +DIS+PLRRGIK+NLDGP+ G+WIPI+YE+LP FC            CG L    + H    QYG W+R
Subjt:  LGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEALQYGEWIR

A0A6P9EGW2 uncharacterized protein LOC1183486452.0e-1342.31Show/hide
Query:  RTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEA-LQYG
        RTS  LG   G    VD       WG  LRV+V ID+S+PL RG  IN+      SWIP KYEKLP FC +  ++ H    C   +    +H+++ LQYG
Subjt:  RTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARSHSEA-LQYG

Query:  EWIR
         W+R
Subjt:  EWIR

A0A7N2R0C3 Reverse transcriptase domain-containing protein7.7e-1332.05Show/hide
Query:  TSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDC-GELYKHARSHSEALQYGE
        T   +G  +G F +VD       WG  LRVRV ID++R L RG KIN++      W+  KYE+LP FC    L+ H  KDC  E  K        LQYG 
Subjt:  TSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDC-GELYKHARSHSEALQYGE

Query:  WIRTKNFLIFGGHGHRNFSWFSRYNSEKLLAQCPSISSVRGSEVRGKYWLQRWIPK
        W+R        G   R   W   +  +K++ +  +  + + +E +G+  +Q  + +
Subjt:  WIRTKNFLIFGGHGHRNFSWFSRYNSEKLLAQCPSISSVRGSEVRGKYWLQRWIPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGATTATCTTCGGATTTTCAATCCATGATTTCTCCTTTGCAAGCAGGATGTATTTATTTCCAATTTCCTTTTTTCATTCTAAGGATTTCAACTGCTTATTTTCA
GGTGACGAGAAAGCTGTCATTTTCGATTTGGACAGGCTGGTCAAGAGAGATTTCAGCCTTCTGGCTGGTATTTCAATGGGTATCAGATTCGGGTCTTCTACAGCAATTGC
ATCTTTCGTCTCAGACTCCATTATGTTCCAATCCCATTGTTTCTTTGTGTTTTTTGCCCACCGGTTGCGATATGGATCATTTGGCCCTTGTCGAAGATTTGTCTAAGTTG
AGTCTTACCTCGGCTAAGGAAGATGTTTCAGTTGATGCCGATAGGTGTGCTGTTGATCGAACGAGTCATTTGTTAGGTAACGTTGTGGGCGTTTTTGAAGATGTGGATAG
TTGTAATGGCTTCCATTATTGGGGGGCCAGTCTCCGAGTGCGAGTGCGGATTGACATCTCTCGGCCTCTTAGAAGAGGAATTAAAATCAACTTGGATGGTCCGATGTGTG
GTAGTTGGATCCCAATCAAGTACGAAAAACTACCGAAGTTCTGCTCGTTTTACAGTTTGATTAGGCATTTATCTAAGGATTGTGGCGAGTTATATAAGCATGCTCGTTCT
CACAGTGAAGCGCTCCAATATGGGGAATGGATCCGCACAAAGAACTTCCTAATCTTCGGTGGCCATGGACACAGGAACTTCTCATGGTTCTCCAGATACAACAGCGAGAA
GCTTTTGGCGCAGTGCCCTTCAATTTCGTCGGTGCGTGGATCTGAGGTACGTGGTAAATATTGGCTTCAACGGTGGATTCCTAAAGTGCCCGGACAGGTGGGAAGTGTTG
GTTCTCCGTCGGGTGGCAGTCCAAGTGGTGGAGTCTTAATAGTTGTAGGTTCACCGTCCGACGACAGTCCAAGCGGTGGAGTCTTAACAGTTGCAGAGGCCAGACTGAAT
TATGTAAGGAAACTAAACCTTGAGAAGACAAGTTTGCTTGAATCTAATGCTATGGAGGTGGGTCATGCGGCTTTCAAACTCCAGAATCATGGGCTCAAGGAAGATACAAA
GTTGGAGATGGTTAACACAGATCAAAGAAGAGTGAAAAAGAAAGGAGGCACCTGGAAGAAGCGTGCTCGCACCGGGTTTATTCCTGAAGATTTAACTTCTATTTGGCCCT
TACTCCCTAGAACCGTTAGAAGGCTAAGCGAGTACCGTTATGCACATTTCTGTGACTCAACTCCGACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGATTATCTTCGGATTTTCAATCCATGATTTCTCCTTTGCAAGCAGGATGTATTTATTTCCAATTTCCTTTTTTCATTCTAAGGATTTCAACTGCTTATTTTCA
GGTGACGAGAAAGCTGTCATTTTCGATTTGGACAGGCTGGTCAAGAGAGATTTCAGCCTTCTGGCTGGTATTTCAATGGGTATCAGATTCGGGTCTTCTACAGCAATTGC
ATCTTTCGTCTCAGACTCCATTATGTTCCAATCCCATTGTTTCTTTGTGTTTTTTGCCCACCGGTTGCGATATGGATCATTTGGCCCTTGTCGAAGATTTGTCTAAGTTG
AGTCTTACCTCGGCTAAGGAAGATGTTTCAGTTGATGCCGATAGGTGTGCTGTTGATCGAACGAGTCATTTGTTAGGTAACGTTGTGGGCGTTTTTGAAGATGTGGATAG
TTGTAATGGCTTCCATTATTGGGGGGCCAGTCTCCGAGTGCGAGTGCGGATTGACATCTCTCGGCCTCTTAGAAGAGGAATTAAAATCAACTTGGATGGTCCGATGTGTG
GTAGTTGGATCCCAATCAAGTACGAAAAACTACCGAAGTTCTGCTCGTTTTACAGTTTGATTAGGCATTTATCTAAGGATTGTGGCGAGTTATATAAGCATGCTCGTTCT
CACAGTGAAGCGCTCCAATATGGGGAATGGATCCGCACAAAGAACTTCCTAATCTTCGGTGGCCATGGACACAGGAACTTCTCATGGTTCTCCAGATACAACAGCGAGAA
GCTTTTGGCGCAGTGCCCTTCAATTTCGTCGGTGCGTGGATCTGAGGTACGTGGTAAATATTGGCTTCAACGGTGGATTCCTAAAGTGCCCGGACAGGTGGGAAGTGTTG
GTTCTCCGTCGGGTGGCAGTCCAAGTGGTGGAGTCTTAATAGTTGTAGGTTCACCGTCCGACGACAGTCCAAGCGGTGGAGTCTTAACAGTTGCAGAGGCCAGACTGAAT
TATGTAAGGAAACTAAACCTTGAGAAGACAAGTTTGCTTGAATCTAATGCTATGGAGGTGGGTCATGCGGCTTTCAAACTCCAGAATCATGGGCTCAAGGAAGATACAAA
GTTGGAGATGGTTAACACAGATCAAAGAAGAGTGAAAAAGAAAGGAGGCACCTGGAAGAAGCGTGCTCGCACCGGGTTTATTCCTGAAGATTTAACTTCTATTTGGCCCT
TACTCCCTAGAACCGTTAGAAGGCTAAGCGAGTACCGTTATGCACATTTCTGTGACTCAACTCCGACATAG
Protein sequenceShow/hide protein sequence
MAGLSSDFQSMISPLQAGCIYFQFPFFILRISTAYFQVTRKLSFSIWTGWSREISAFWLVFQWVSDSGLLQQLHLSSQTPLCSNPIVSLCFLPTGCDMDHLALVEDLSKL
SLTSAKEDVSVDADRCAVDRTSHLLGNVVGVFEDVDSCNGFHYWGASLRVRVRIDISRPLRRGIKINLDGPMCGSWIPIKYEKLPKFCSFYSLIRHLSKDCGELYKHARS
HSEALQYGEWIRTKNFLIFGGHGHRNFSWFSRYNSEKLLAQCPSISSVRGSEVRGKYWLQRWIPKVPGQVGSVGSPSGGSPSGGVLIVVGSPSDDSPSGGVLTVAEARLN
YVRKLNLEKTSLLESNAMEVGHAAFKLQNHGLKEDTKLEMVNTDQRRVKKKGGTWKKRARTGFIPEDLTSIWPLLPRTVRRLSEYRYAHFCDSTPT