; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036162 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036162
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc CCHC-type-like protein
Genome locationchr3:40763433..40764516
RNA-Seq ExpressionLag0036162
SyntenyLag0036162
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCI00644.1 zinc CCHC-type-like protein [Trifolium medium]1.4e-2332.22Show/hide
Query:  KNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVE
        K  +  AWR +    V+ + +N++LF++    D + ++KNGPW F +NLLVL+    +++P D++   +EFW R+ +LPL  R+  +A+++G+ LG FV+
Subjt:  KNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVE

Query:  VDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDL----FLLWKDWAYVSKENDLEEDKEPEGEDYQ
        VDN++S    G  +R++  +D+ +PL+RG +IK  G  +  +     L    F+  K    +    D+E+  E E  D +
Subjt:  VDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDL----FLLWKDWAYVSKENDLEEDKEPEGEDYQ

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.5e-2542.34Show/hide
Query:  AWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVDNEKS
        AW+     TVESIG+N++LF +    D   +MK GPW F K L+VL++P  +K   +++F +  FW+ L +LP+ + NK +A R+GN +G FV+VD  + 
Subjt:  AWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVDNEKS

Query:  ENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWI
           WG S+RI+V +DI +PLRRG  I   G     WI
Subjt:  ENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWI

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.9e-2438.06Show/hide
Query:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF
        A+KN +   W+  +   V  IG N+++F +  + DK  ++ +GPW F K+LL+L E   N +P D+   + +FW+ + NLPL   NK V E +GN +G+F
Subjt:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF

Query:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMI
        +++D E     WG ++RI+V LD+ +PLRRG  +
Subjt:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMI

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]2.2e-2436.43Show/hide
Query:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF
        A+KN +   W+  +   V  IG N+++F +  + DK  ++ NGPW F K+LL+L E   N +P D+     +FW+ + NLPL   NK V + +GN +G+F
Subjt:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF

Query:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSD
        +++D E     WG ++RI+V +D+ +PLRRG  +  + +D
Subjt:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSD

XP_042988686.1 uncharacterized protein LOC122316216 [Carya illinoinensis]2.5e-2341.98Show/hide
Query:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF
        A K  MK AWR         +  N++L  +ED+ DKE +++ GPW F K+LL+++E   NK+   +  ++A FW+RL +LPL  RN  V  RIG K+G  
Subjt:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF

Query:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRG
        +EVD +  E  WG+ +R++V LDI +PL RG
Subjt:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRG

TrEMBL top hitse value%identityAlignment
A0A392MB81 Zinc CCHC-type-like protein (Fragment)2.7e-2331.25Show/hide
Query:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF
        A K  +  AWR R    ++ + +N++LFK+    + + + KNGPW F +NL++L     N++P +++  K  FW+R+ +LPL  R++ +A+++GN LG F
Subjt:  AIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF

Query:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDLFLLWKDWAYVSKEN-------------DLEEDKEPEGEDYQG
         E+D  K  N  G  +RI+  LD+ +PL+RG  +K  G D+            W D+ Y    N             D EE ++ + + Y G
Subjt:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDLFLLWKDWAYVSKEN-------------DLEEDKEPEGEDYQG

A0A392NMN9 Zinc CCHC-type-like protein (Fragment)7.0e-2432.22Show/hide
Query:  KNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVE
        K  +  AWR +    V+ + +N++LF++    D + ++KNGPW F +NLLVL+    +++P D++   +EFW R+ +LPL  R+  +A+++G+ LG FV+
Subjt:  KNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVE

Query:  VDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDL----FLLWKDWAYVSKENDLEEDKEPEGEDYQ
        VDN++S    G  +R++  +D+ +PL+RG +IK  G  +  +     L    F+  K    +    D+E+  E E  D +
Subjt:  VDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDL----FLLWKDWAYVSKENDLEEDKEPEGEDYQ

A0A484LY53 CCHC-type domain-containing protein2.0e-2335.46Show/hide
Query:  MAIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGE
        +A+KN M   WR  E   V+ +G  +Y+F++  + + E +M+  PW F    L+LE  G +K P +V       W+R+  L  GF ++ VA+R+GN++G+
Subjt:  MAIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGE

Query:  FVEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSD
        FVE D +   N W + +RI+V+LD+ +PL++G  +K  G +
Subjt:  FVEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSD

A0A6J1DU55 uncharacterized protein LOC1110231357.5e-2642.34Show/hide
Query:  AWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVDNEKS
        AW+     TVESIG+N++LF +    D   +MK GPW F K L+VL++P  +K   +++F +  FW+ L +LP+ + NK +A R+GN +G FV+VD  + 
Subjt:  AWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVDNEKS

Query:  ENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWI
           WG S+RI+V +DI +PLRRG  I   G     WI
Subjt:  ENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWI

A0A6J1DX30 uncharacterized protein LOC1110248742.0e-2337.93Show/hide
Query:  IKNAMKGAWRTRED-FTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF
        +KN M+ AW+   + F V+S+G N++LF +    D+  I K+GPW F + L+++ +P     P ++DF K   W+R  +LPLG   + +A R+GN LG F
Subjt:  IKNAMKGAWRTRED-FTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEF

Query:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWI
         E D +     WG+++R++V LDI++PLRRG  +   G     WI
Subjt:  VEVDNEKSENFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.3e-0628.89Show/hide
Query:  ESIGRNMYLFKYEDIPDKE----WIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVD
        E +GR + + K E +   E     I++ GPW F   + V++     K   D +FK+  FW+++  +PL F    +   IG ++G F+E +
Subjt:  ESIGRNMYLFKYEDIPDKE----WIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCAAGAATGCAATGAAAGGCGCATGGAGAACCAGAGAAGACTTTACGGTTGAATCCATTGGAAGGAACATGTACCTGTTCAAATATGAAGACATACCTGACAA
AGAATGGATTATGAAGAATGGCCCTTGGTTATTTGGCAAAAATTTACTTGTTCTTGAAGAACCAGGGGTAAATAAAAGACCAGTGGATGTTGATTTCAAGAAGGCGGAGT
TCTGGTTAAGGCTGATTAACCTTCCTCTGGGGTTTAGAAATAAACATGTTGCGGAGAGAATAGGCAACAAATTGGGAGAATTTGTAGAGGTTGACAATGAAAAGAGTGAA
AATTTCTGGGGAAACAGTATAAGAATCCAGGTAAGGCTAGATATAAATCAACCTCTTCGAAGAGGATTCATGATAAAAGATGCAGGCAGTGATGTTGAGCGTTGGATAAC
TGGCAATGATCTGTTTTTGCTGTGGAAGGATTGGGCATATGTAAGCAAAGAAAATGATCTGGAGGAAGACAAAGAACCGGAAGGAGAAGATTATCAGGGAAACATCTCAA
TGATTATACCTGAGGAATGGGGAAGCCAAGGTGAAGGTGGAATGGTAGGAGGGAATGATTTTTACCCAGATGGTTGTGGCTGTGGAACAGCCCTGCCGGGGGTTATGAAA
ATCATTTGTTGGAATGCTCAGGGTTGGGGAACCCAAGAGCATTCAGAGCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCAAGAATGCAATGAAAGGCGCATGGAGAACCAGAGAAGACTTTACGGTTGAATCCATTGGAAGGAACATGTACCTGTTCAAATATGAAGACATACCTGACAA
AGAATGGATTATGAAGAATGGCCCTTGGTTATTTGGCAAAAATTTACTTGTTCTTGAAGAACCAGGGGTAAATAAAAGACCAGTGGATGTTGATTTCAAGAAGGCGGAGT
TCTGGTTAAGGCTGATTAACCTTCCTCTGGGGTTTAGAAATAAACATGTTGCGGAGAGAATAGGCAACAAATTGGGAGAATTTGTAGAGGTTGACAATGAAAAGAGTGAA
AATTTCTGGGGAAACAGTATAAGAATCCAGGTAAGGCTAGATATAAATCAACCTCTTCGAAGAGGATTCATGATAAAAGATGCAGGCAGTGATGTTGAGCGTTGGATAAC
TGGCAATGATCTGTTTTTGCTGTGGAAGGATTGGGCATATGTAAGCAAAGAAAATGATCTGGAGGAAGACAAAGAACCGGAAGGAGAAGATTATCAGGGAAACATCTCAA
TGATTATACCTGAGGAATGGGGAAGCCAAGGTGAAGGTGGAATGGTAGGAGGGAATGATTTTTACCCAGATGGTTGTGGCTGTGGAACAGCCCTGCCGGGGGTTATGAAA
ATCATTTGTTGGAATGCTCAGGGTTGGGGAACCCAAGAGCATTCAGAGCGCTAA
Protein sequenceShow/hide protein sequence
MAIKNAMKGAWRTREDFTVESIGRNMYLFKYEDIPDKEWIMKNGPWLFGKNLLVLEEPGVNKRPVDVDFKKAEFWLRLINLPLGFRNKHVAERIGNKLGEFVEVDNEKSE
NFWGNSIRIQVRLDINQPLRRGFMIKDAGSDVERWITGNDLFLLWKDWAYVSKENDLEEDKEPEGEDYQGNISMIIPEEWGSQGEGGMVGGNDFYPDGCGCGTALPGVMK
IICWNAQGWGTQEHSER