; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036175 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036175
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:40997509..40998417
RNA-Seq ExpressionLag0036175
SyntenyLag0036175
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]2.3e-3336.4Show/hide
Query:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIG
        ETK      + ++  ++ +  F V  +G SGGL LLW +  EV ++SFS GHIDA +    +++ RFTGFYGNP+  +R  SW L+ RL  L D PWI G
Subjt:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIG

Query:  GDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ-----------------------NIEVHHL---------DYHNSDHRPILASIRSKV
        GDFNEI    EK  G  R+ S ++DF+  L  C LVD+G++ Q                       N E H+L         D+ +SDHRPI A+I   V
Subjt:  GDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ-----------------------NIEVHHL---------DYHNSDHRPILASIRSKV

Query:  KLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGS-SRGAKDIIKKIEGSML-RLCSWNKTRLEGSLSGVIARKTKAIKDME
               K+K  +FE  W+  AEC  IV + W S       +D I  I G    RL +WNKT+  GS+  ++  +   + ++E
Subjt:  KLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGS-SRGAKDIIKKIEGSML-RLCSWNKTRLEGSLSGVIARKTKAIKDME

KAG6636592.1 hypothetical protein CIPAW_11G121200 [Carya illinoinensis]1.8e-3334.92Show/hide
Query:  LDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGGDFNEITF
        +D LK  L    CF V S G SGGLGLLW   + V+++SFS  HID  I  D + + RFTG YG+P+   R  +W+L+R L S+   PW++GGD NE+  
Subjt:  LDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGGDFNEITF

Query:  DLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ--------------------------------NIEVHHLDYHNSDHRPILASIRSKVKLRSSSSK
          EK  GR R  SQ+  F+  L+ C L DLGYK Q                                ++ V H +  +SDH PIL         +    +
Subjt:  DLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ--------------------------------NIEVHHLDYHNSDHRPILASIRSKVKLRSSSSK

Query:  EKKPKFEESWINFAECEQIVKEVW-DSGSSRGAKDIIKKIEGSMLRLCSWNK
         K+   E  W+   +CE+I+++VW + G +RG +D++  I+G   +L  WN+
Subjt:  EKKPKFEESWINFAECEQIVKEVW-DSGSSRGAKDIIKKIEGSMLRLCSWNK

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.3e-3941.25Show/hide
Query:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGG
        ETK       + K  L+   C  V S G SGGL LLW     V IQS S GHID+ I+    S RFTGFYGNP    R +SW L+ RL  + D PWIIGG
Subjt:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGG

Query:  DFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLV---DLGYKVQNIEVHHLDYHNSDHRPILASIRSKVKLRSSSSKEKKPKFEESWINFAECEQIVKE
        DFNEI    EK+ G  RN+SQM        L   +    +  K  N++V HL+  +SDHRPILAS   ++    +  K++K +FEESW+    C  I+  
Subjt:  DFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLV---DLGYKVQNIEVHHLDYHNSDHRPILASIRSKVKLRSSSSKEKKPKFEESWINFAECEQIVKE

Query:  VWDSGSSRGAKDIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGS
         W S    G +    KI   + RL  WNK RL  SL G IA K K ++ +  ++  S
Subjt:  VWDSGSSRGAKDIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGS

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]7.1e-3535Show/hide
Query:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIG
        ETK  +  +D LK  L    CF V S G SGGLGLLW   + V+++SFS  HID  I  D + + RFTG YG+P+   R  +W+L+R L S+   PW++G
Subjt:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIG

Query:  GDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ--------------------------------NIEVHHLDYHNSDHRPILASIRSKV
        GD NE+    EK  GR R  SQ+  F+  L+ C L DLGYK Q                                ++ V H +  +SDH PIL       
Subjt:  GDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ--------------------------------NIEVHHLDYHNSDHRPILASIRSKV

Query:  KLRSSSSKEKKPKFEESWINFAECEQIVKEVW-DSGSSRGAKDIIKKIEGSMLRLCSWNK
          +    + K+   E  W+   +CE+I+++VW + G +RG +D++  I+G   +L  WN+
Subjt:  KLRSSSSKEKKPKFEESWINFAECEQIVKEVW-DSGSSRGAKDIIKKIEGSMLRLCSWNK

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]7.1e-3535Show/hide
Query:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIG
        ETK  +  +D LK  L    CF V S G SGGLGLLW   + V+++SFS  HID  I  D + + RFTG YG+P+   R  +W+L+R L S+   PW++G
Subjt:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSL-RFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIG

Query:  GDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ--------------------------------NIEVHHLDYHNSDHRPILASIRSKV
        GD NE+    EK  GR R  SQ+  F+  L+ C L DLGYK Q                                ++ V H +  +SDH PIL       
Subjt:  GDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQ--------------------------------NIEVHHLDYHNSDHRPILASIRSKV

Query:  KLRSSSSKEKKPKFEESWINFAECEQIVKEVW-DSGSSRGAKDIIKKIEGSMLRLCSWNK
          +    + K+ +FE  W+   +CE+I+++VW + G +RG ++++  I+G   +L  WN+
Subjt:  KLRSSSSKEKKPKFEESWINFAECEQIVKEVW-DSGSSRGAKDIIKKIEGSMLRLCSWNK

TrEMBL top hitse value%identityAlignment
A0A2N9F086 Reverse transcriptase domain-containing protein5.3e-3633.82Show/hide
Query:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWI-SKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII
        METK +++++++ +VSL     F VPSLG SGGL + WK+GI ++I+++++ HID +I  ++ M  R TGFYG PE   R  SW LM +L+ L   PW+ 
Subjt:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWI-SKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII

Query:  GGDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYK------------VQNIE--------------------VHHLDYHNSDHRPILASIRSK
         GDFNEI +  EK     R   +M +F+  LS C+L+D+GY+            V N++                    V H+    SDH PIL  +   
Subjt:  GGDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYK------------VQNIE--------------------VHHLDYHNSDHRPILASIRSK

Query:  VKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIAR
        +   +S  K++  +FEE WI  + CE  VK +W   + +G+    + +KI+   + L  W++ +  G  S + AR
Subjt:  VKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIAR

A0A2N9FD73 Uncharacterized protein7.4e-3834.72Show/hide
Query:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWIS-KDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII
        METK     +++++V L     F VPS+G SGGL LLWKEGI ++IQ+FSS HID+ IS KD  + R TGFYG PE   R  SW L+  L+ +   PW+ 
Subjt:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWIS-KDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII

Query:  GGDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYK--------------------------------VQNIEVHHLDYHNSDHRPILASIRSK
         GDFNEI    EK+   Q+   +M DF+  LS C+L+D+GY+                                  N  V H+    SDH PIL  I  +
Subjt:  GGDFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLVDLGYK--------------------------------VQNIEVHHLDYHNSDHRPILASIRSK

Query:  VKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQ
        +       K++  +FEE W+   ECEQ+V+ +WD  +++G+    + +KI+   + L  W+K    G + G +  +  +I+ + + N+
Subjt:  VKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQ

A0A2N9FP20 Reverse transcriptase domain-containing protein1.2e-3534.93Show/hide
Query:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWIS-KDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII
        METK     ++ +++ L    CF VPS+G SGGL LLW + +E+ IQ+FS  HIDA +  +  +  RFTGFYGNP    R+ SW L+ +L SLS+ PW++
Subjt:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWIS-KDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII

Query:  GGDFNEITFDLEKVEGRQR-NQSQMNDFKSTLSLCHLVDLGYK------------VQNIE--------------------VHHLDYHNSDHRPILASIRS
         GDFNEI   LE+  G    +Q+ M +F   L+ C LVDLGY+              N++                    + HL    SDH PIL  + +
Subjt:  GGDFNEITFDLEKVEGRQR-NQSQMNDFKSTLSLCHLVDLGYK------------VQNIE--------------------VHHLDYHNSDHRPILASIRS

Query:  KVKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGSL
         +    S  K +  KFEE W    ECE+++KEVWD  +  G+    + +KI+     L  W K+ +       I  +T ++ ++   NQG L
Subjt:  KVKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGSL

A0A2N9G933 Reverse transcriptase domain-containing protein1.2e-3534.93Show/hide
Query:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWIS-KDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII
        METK     ++ +++ L    CF VPS+G SGGL LLW + +E+ IQ+FS  HIDA +  +  +  RFTGFYGNP    R+ SW L+ +L SLS+ PW++
Subjt:  METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWIS-KDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWII

Query:  GGDFNEITFDLEKVEGRQR-NQSQMNDFKSTLSLCHLVDLGYK------------VQNIE--------------------VHHLDYHNSDHRPILASIRS
         GDFNEI   LE+  G    +Q+ M +F   L+ C LVDLGY+              N++                    + HL    SDH PIL  + +
Subjt:  GGDFNEITFDLEKVEGRQR-NQSQMNDFKSTLSLCHLVDLGYK------------VQNIE--------------------VHHLDYHNSDHRPILASIRS

Query:  KVKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGSL
         +    S  K +  KFEE W    ECE+++KEVWD  +  G+    + +KI+     L  W K+ +       I  +T ++ ++   NQG L
Subjt:  KVKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAK--DIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGSL

A0A6J1DUG8 uncharacterized protein LOC1110241356.1e-4041.25Show/hide
Query:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGG
        ETK       + K  L+   C  V S G SGGL LLW     V IQS S GHID+ I+    S RFTGFYGNP    R +SW L+ RL  + D PWIIGG
Subjt:  ETKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGG

Query:  DFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLV---DLGYKVQNIEVHHLDYHNSDHRPILASIRSKVKLRSSSSKEKKPKFEESWINFAECEQIVKE
        DFNEI    EK+ G  RN+SQM        L   +    +  K  N++V HL+  +SDHRPILAS   ++    +  K++K +FEESW+    C  I+  
Subjt:  DFNEITFDLEKVEGRQRNQSQMNDFKSTLSLCHLV---DLGYKVQNIEVHHLDYHNSDHRPILASIRSKVKLRSSSSKEKKPKFEESWINFAECEQIVKE

Query:  VWDSGSSRGAKDIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGS
         W S    G +    KI   + RL  WNK RL  SL G IA K K ++ +  ++  S
Subjt:  VWDSGSSRGAKDIIKKIEGSMLRLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTAAGAACAAAAGTGCGAACCTTGATAAGCTTAAAGTTAGTTTGAACTGTACAGGTTGTTTCGGTGTGCCTAGCCTTGGTCTAAGCGGAGGGTTGGGTTTGTT
GTGGAAGGAAGGTATAGAGGTGGATATTCAGTCTTTTTCTAGTGGCCATATTGACGCTTGGATCAGTAAAGATTCCATGAGTTTGAGGTTCACCGGTTTTTATGGTAACC
CTGAAGTGGATAACAGAAAGTCTTCGTGGGATCTTATGAGGAGATTGCATTCGTTGAGTGACAGGCCTTGGATAATAGGGGGGGACTTCAACGAAATTACGTTCGACCTC
GAGAAAGTCGAGGGCCGTCAGAGAAATCAAAGTCAAATGAATGACTTCAAGTCTACCTTAAGCCTCTGTCATTTGGTCGATTTAGGCTACAAAGTCCAGAACATCGAAGT
CCACCATTTGGATTATCACAATTCGGATCACAGGCCTATTCTTGCTTCCATAAGAAGTAAGGTCAAGCTGAGGTCGAGCTCTTCTAAGGAGAAAAAGCCTAAATTTGAAG
AGAGTTGGATTAATTTTGCTGAATGTGAGCAAATTGTGAAGGAGGTTTGGGACAGTGGTTCGAGTAGAGGAGCTAAAGACATTATCAAAAAAATTGAAGGCAGCATGCTT
AGGCTTTGTTCCTGGAACAAAACTAGACTAGAAGGATCCCTATCAGGTGTTATTGCTAGGAAAACTAAGGCGATCAAGGACATGGAGCTTATTAACCAAGGGAGCTTGAC
AACACTATTTCCATCATGGACAAAGAATTGGACTCTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTAAGAACAAAAGTGCGAACCTTGATAAGCTTAAAGTTAGTTTGAACTGTACAGGTTGTTTCGGTGTGCCTAGCCTTGGTCTAAGCGGAGGGTTGGGTTTGTT
GTGGAAGGAAGGTATAGAGGTGGATATTCAGTCTTTTTCTAGTGGCCATATTGACGCTTGGATCAGTAAAGATTCCATGAGTTTGAGGTTCACCGGTTTTTATGGTAACC
CTGAAGTGGATAACAGAAAGTCTTCGTGGGATCTTATGAGGAGATTGCATTCGTTGAGTGACAGGCCTTGGATAATAGGGGGGGACTTCAACGAAATTACGTTCGACCTC
GAGAAAGTCGAGGGCCGTCAGAGAAATCAAAGTCAAATGAATGACTTCAAGTCTACCTTAAGCCTCTGTCATTTGGTCGATTTAGGCTACAAAGTCCAGAACATCGAAGT
CCACCATTTGGATTATCACAATTCGGATCACAGGCCTATTCTTGCTTCCATAAGAAGTAAGGTCAAGCTGAGGTCGAGCTCTTCTAAGGAGAAAAAGCCTAAATTTGAAG
AGAGTTGGATTAATTTTGCTGAATGTGAGCAAATTGTGAAGGAGGTTTGGGACAGTGGTTCGAGTAGAGGAGCTAAAGACATTATCAAAAAAATTGAAGGCAGCATGCTT
AGGCTTTGTTCCTGGAACAAAACTAGACTAGAAGGATCCCTATCAGGTGTTATTGCTAGGAAAACTAAGGCGATCAAGGACATGGAGCTTATTAACCAAGGGAGCTTGAC
AACACTATTTCCATCATGGACAAAGAATTGGACTCTCTTTTAG
Protein sequenceShow/hide protein sequence
METKNKSANLDKLKVSLNCTGCFGVPSLGLSGGLGLLWKEGIEVDIQSFSSGHIDAWISKDSMSLRFTGFYGNPEVDNRKSSWDLMRRLHSLSDRPWIIGGDFNEITFDL
EKVEGRQRNQSQMNDFKSTLSLCHLVDLGYKVQNIEVHHLDYHNSDHRPILASIRSKVKLRSSSSKEKKPKFEESWINFAECEQIVKEVWDSGSSRGAKDIIKKIEGSML
RLCSWNKTRLEGSLSGVIARKTKAIKDMELINQGSLTTLFPSWTKNWTLF