; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036177 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036177
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr3:41023603..41024611
RNA-Seq ExpressionLag0036177
SyntenyLag0036177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.2e-0633.67Show/hide
Query:  FVNNLARAKYNELLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQ
        FV+  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P  VNA +V +FY+NI E     V+VRG+++ ++P AIN  + +Q
Subjt:  FVNNLARAKYNELLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.4e-0737.25Show/hide
Query:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV
        +F    A  +Y N +  R    E+GF        G LP F+   IT H W+ FC+ PE     +V +FYAN+ +     V VRGV V WS  AINA++ +
Subjt:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV

Query:  QD
         D
Subjt:  QD

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]2.2e-0837.27Show/hide
Query:  ARAKYNE-LLKRDFLFERGFSGD------LPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--FPH
        A  +Y E +  R    E+GF GD       P F+   IT H W+LFC+ PE + A +V +FYAN+   +   V VRGV V  S  AIN +Y + D    H
Subjt:  ARAKYNE-LLKRDFLFERGFSGD------LPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--FPH

Query:  AGYNEMVVAP
        + + E +  P
Subjt:  AGYNEMVVAP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-0738.24Show/hide
Query:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV
        +F    A  +Y N +  R    E+GF        G LP F+   IT H W+ FC+ PE     +V +FYAN+ + E   V VRGV V WS  AINA++ +
Subjt:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV

Query:  QD
         D
Subjt:  QD

RYE21173.1 hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]6.3e-0835.96Show/hide
Query:  FVNNLARAKYNELLKRDFLFERGFSGDLPHFLRADITN----HGWELFCSKPE-SVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--
        F +  A  +Y+ L++R  +FERG        + + I N      W  FC+ PE   N  ++ +FYAN+ + E   V VRGV VD S GAINAL    D  
Subjt:  FVNNLARAKYNELLKRDFLFERGFSGDLPHFLRADITN----HGWELFCSKPE-SVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--

Query:  FPHAGYNEMVVAPS
        F + GY + +  P+
Subjt:  FPHAGYNEMVVAPS

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.6e-0737.25Show/hide
Query:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV
        +F    A  +Y N +  R    E+GF        G LP F+   IT H W+ FC+ PE     +V +FYAN+ +     V VRGV V WS  AINA++ +
Subjt:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV

Query:  QD
         D
Subjt:  QD

A0A2P5B0K0 Uncharacterized protein1.1e-0837.27Show/hide
Query:  ARAKYNE-LLKRDFLFERGFSGD------LPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--FPH
        A  +Y E +  R    E+GF GD       P F+   IT H W+LFC+ PE + A +V +FYAN+   +   V VRGV V  S  AIN +Y + D    H
Subjt:  ARAKYNE-LLKRDFLFERGFSGD------LPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--FPH

Query:  AGYNEMVVAP
        + + E +  P
Subjt:  AGYNEMVVAP

A0A2P5BCG4 Uncharacterized protein (Fragment)5.2e-0838.24Show/hide
Query:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV
        +F    A  +Y N +  R    E+GF        G LP F+   IT H W+ FC+ PE     +V +FYAN+ + E   V VRGV V WS  AINA++ +
Subjt:  RFVNNLARAKY-NELLKRDFLFERGF-------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNV

Query:  QD
         D
Subjt:  QD

A0A4Q3ENY7 Uncharacterized protein3.1e-0835.96Show/hide
Query:  FVNNLARAKYNELLKRDFLFERGFSGDLPHFLRADITN----HGWELFCSKPE-SVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--
        F +  A  +Y+ L++R  +FERG        + + I N      W  FC+ PE   N  ++ +FYAN+ + E   V VRGV VD S GAINAL    D  
Subjt:  FVNNLARAKYNELLKRDFLFERGFSGDLPHFLRADITN----HGWELFCSKPE-SVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQD--

Query:  FPHAGYNEMVVAPS
        F + GY + +  P+
Subjt:  FPHAGYNEMVVAPS

A0A6A2ZUE4 Uncharacterized protein5.8e-0733.67Show/hide
Query:  FVNNLARAKYNELLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQ
        FV+  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P  VNA +V +FY+NI E     V+VRG+++ ++P AIN  + +Q
Subjt:  FVNNLARAKYNELLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAATGAGAGCAAGAAAAGAGAGAGACAATGAGGAAGATGAGATACCAGTTACCCCGGAGGCACAAAAAGTGAAAGCAAAGAAAAAGAAAACACCAGAAGAAAA
AGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGTGGAGGATCAAGAAATAGTGCAAAAGGAAGTAGAGGATGTTGCTGTCGAGGCAGTTGAGGAAGACAATTCGAAGGAAC
CCGAAGGACAGAACCCAGAGCAGACTGAGTCGATAGTTGCGGATGTGGAGGTGATTCAAGAAGAGCACAACAAAGGCAAAAGTGTTGCTGCAGCATCGGAGGAACCTGAC
GAGATAGAAGAGCCACAGTTGTCGTATGACCGCTTCGTCAATAATCTTGCCAGAGCAAAATATAATGAGCTGCTTAAGAGAGACTTCCTGTTCGAGAGAGGCTTTAGTGG
TGATCTTCCACATTTTCTGAGGGCCGACATTACGAACCACGGTTGGGAGTTATTCTGTTCCAAGCCTGAATCTGTGAACGCGCATGTAGTGTGCAAGTTTTATGCAAATA
TTGACGAGGAAGAGGGTTTCCAAGTTATCGTTCGAGGAGTAGCAGTTGACTGGAGTCCTGGTGCAATTAACGCCCTGTATAACGTTCAAGATTTCCCCCACGCAGGATAC
AATGAGATGGTTGTGGCGCCATCTAATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAATGAGAGCAAGAAAAGAGAGAGACAATGAGGAAGATGAGATACCAGTTACCCCGGAGGCACAAAAAGTGAAAGCAAAGAAAAAGAAAACACCAGAAGAAAA
AGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGTGGAGGATCAAGAAATAGTGCAAAAGGAAGTAGAGGATGTTGCTGTCGAGGCAGTTGAGGAAGACAATTCGAAGGAAC
CCGAAGGACAGAACCCAGAGCAGACTGAGTCGATAGTTGCGGATGTGGAGGTGATTCAAGAAGAGCACAACAAAGGCAAAAGTGTTGCTGCAGCATCGGAGGAACCTGAC
GAGATAGAAGAGCCACAGTTGTCGTATGACCGCTTCGTCAATAATCTTGCCAGAGCAAAATATAATGAGCTGCTTAAGAGAGACTTCCTGTTCGAGAGAGGCTTTAGTGG
TGATCTTCCACATTTTCTGAGGGCCGACATTACGAACCACGGTTGGGAGTTATTCTGTTCCAAGCCTGAATCTGTGAACGCGCATGTAGTGTGCAAGTTTTATGCAAATA
TTGACGAGGAAGAGGGTTTCCAAGTTATCGTTCGAGGAGTAGCAGTTGACTGGAGTCCTGGTGCAATTAACGCCCTGTATAACGTTCAAGATTTCCCCCACGCAGGATAC
AATGAGATGGTTGTGGCGCCATCTAATGAGTAA
Protein sequenceShow/hide protein sequence
MAKMRARKERDNEEDEIPVTPEAQKVKAKKKKTPEEKEAKRRRRQQRVEDQEIVQKEVEDVAVEAVEEDNSKEPEGQNPEQTESIVADVEVIQEEHNKGKSVAAASEEPD
EIEEPQLSYDRFVNNLARAKYNELLKRDFLFERGFSGDLPHFLRADITNHGWELFCSKPESVNAHVVCKFYANIDEEEGFQVIVRGVAVDWSPGAINALYNVQDFPHAGY
NEMVVAPSNE