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Lag0036178 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036178
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:41037082..41037638
RNA-Seq ExpressionLag0036178
SyntenyLag0036178
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8501049.1 hypothetical protein CXB51_003148 [Gossypium anomalum]1.3e-2245.51Show/hide
Query:  MQAQIKAIHSMMMGMTMNNQANITS--VNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQPTQQQLQKNFQQV--PVQSQESN-LETL
        + +Q+ +I SM+  +T N   + T+   N   ++ C  CGE H+ + CP NP S++Y  G+  SN +    QP   QL    QQV  PVQ++ SN LE L
Subjt:  MQAQIKAIHSMMMGMTMNNQANITS--VNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQPTQQQLQKNFQQV--PVQSQESN-LETL

Query:  MKEYMARNDVAVRNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
        +K YMA+ND  +RNLE Q+GQ+A E++NRPQG LPS T+     GKE CKA+TLRS
Subjt:  MKEYMARNDVAVRNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]7.9e-2343.93Show/hide
Query:  VSSLCCEICGEEHIADNCPLNPASVFYAAGSSN------SNTH--------------------------QFGKQ-----------PTQQQLQKNFQQVPV
        V+ L C  C E HI D CP NPASVFY    +N      SNT+                          Q  KQ           P QQ+  +  Q  PV
Subjt:  VSSLCCEICGEEHIADNCPLNPASVFYAAGSSN------SNTH--------------------------QFGKQ-----------PTQQQLQKNFQQVPV

Query:  QSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
        Q+  SNLE +MKEYMAR D  +       RN E QLGQ+A E+KNRPQG+ P  TE+P REGKEQCKAVTLRS
Subjt:  QSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]2.7e-2343.21Show/hide
Query:  MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQP----TQQQLQKNFQQVPVQSQESNLETLM
        + AQ+ ++ +++  M M       +    + + C  CG+ H  +NCP NPASV Y   SS+      GKQ       QQ +      P  SQ S+LE+LM
Subjt:  MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQP----TQQQLQKNFQQVPVQSQESNLETLM

Query:  KEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
        ++YMA+ND  +       +NLE+QLGQ+A ++KNRPQGTLPS TE P R+GKE CKAVTLRS
Subjt:  KEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]6.2e-2037.5Show/hide
Query:  MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAA------------------------------GSSNSNTHQFGKQ
        + AQ+ ++ +++  M M       +    + + C  CG+ H  +NCP NPASV Y                                G+S+S     GKQ
Subjt:  MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAA------------------------------GSSNSNTHQFGKQ

Query:  P----TQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
               QQ +      P  SQ S+LE+LM++YMA+ND  +       RNLEVQLGQ+A  +KNRPQGTLPS TE P R+GKE CKA+TLRS
Subjt:  P----TQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]2.8e-2037.37Show/hide
Query:  MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAA------------------------------GSSNSNTHQ----
        + AQ+ ++ +++  M M       +    + + C  CG+ H  +NCP NPASV Y                                G+S+S   Q    
Subjt:  MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAA------------------------------GSSNSNTHQ----

Query:  ------FGKQPTQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
              F +QP  QQ  +     P  SQ S+LE+LM++YMA+ND  +       RNLEVQLGQ+A ++KNRPQGTLPS TE P R+GKE CKAVTLRS
Subjt:  ------FGKQPTQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248971.5e-1656.82Show/hide
Query:  PTQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
        P QQQ  +  Q  P+Q+  SNLE +MKEYMAR D  +       RN   QLG +A E+KNRPQG+ P  TE+P REGKEQCKAVTLRS
Subjt:  PTQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

A0A6J1DY39 uncharacterized protein LOC1110256537.7e-1632.19Show/hide
Query:  MQAQIKAIHSMMMGMTMNN--------QANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAA-----------------------------GSSNSN
        MQ QI  I  M+  M  NN          N + V  ++   C  CG+ H ++NCP NP+S++Y                               GSSN+ 
Subjt:  MQAQIKAIHSMMMGMTMNN--------QANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAA-----------------------------GSSNSN

Query:  THQ-----------------FGKQPTQQQLQKNFQQVPVQSQESNLETLMKE----------------------------YMARNDVAVRNLEVQLGQIA
         H                  F   P Q   QKN+ Q P Q   SN+E LMKE                            YM RNDV VR LE+QLGQ+ 
Subjt:  THQ-----------------FGKQPTQQQLQKNFQQVPVQSQESNLETLMKE----------------------------YMARNDVAVRNLEVQLGQIA

Query:  QEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
         E++ RPQG+LPS TE P R GKE C ++  RS
Subjt:  QEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

A0A6J1DYG0 uncharacterized protein LOC1110257643.8e-2343.93Show/hide
Query:  VSSLCCEICGEEHIADNCPLNPASVFYAAGSSN------SNTH--------------------------QFGKQ-----------PTQQQLQKNFQQVPV
        V+ L C  C E HI D CP NPASVFY    +N      SNT+                          Q  KQ           P QQ+  +  Q  PV
Subjt:  VSSLCCEICGEEHIADNCPLNPASVFYAAGSSN------SNTH--------------------------QFGKQ-----------PTQQQLQKNFQQVPV

Query:  QSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
        Q+  SNLE +MKEYMAR D  +       RN E QLGQ+A E+KNRPQG+ P  TE+P REGKEQCKAVTLRS
Subjt:  QSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

A0A6J1DZC3 uncharacterized protein LOC1110244493.7e-1835.61Show/hide
Query:  MQAQIKAIHSMMMGMTMNNQA--------NITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQ----------------PTQQQL
        MQ+Q+  +  MM  M  NN A        N+  V  +    C  CG+ H ++NCP NP  + Y    S++N  Q   Q                P Q   
Subjt:  MQAQIKAIHSMMMGMTMNNQA--------NITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQ----------------PTQQQL

Query:  QKNFQQVPVQSQESNLETLMKE------------------------------YMARNDVAVRNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKA
        QKN  Q PVQ   S +E++MKE                              Y +RND A+RNLE Q+GQ+A E+KNRP+GTLPS TE P  EG+E CK 
Subjt:  QKNFQQVPVQSQESNLETLMKE------------------------------YMARNDVAVRNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKA

Query:  VTLRS
        +T RS
Subjt:  VTLRS

A0A6P4MBX5 uncharacterized protein LOC1084556641.4e-1736.22Show/hide
Query:  MQAQIKAIHSMMMGMTMNNQANITS--VNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQ----------------------------
        + +Q+ +I SM+  +T N   +  +   N   ++ C   GE H+ + CP NP+S+ Y  G+ N N  + G Q                            
Subjt:  MQAQIKAIHSMMMGMTMNNQANITS--VNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQ----------------------------

Query:  ---PTQQQLQKNFQQVPVQSQESN-LETLMKEYMARNDVAVRNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS
           PTQ        Q PVQ++ SN LE L+K YM +ND  +RNLE Q+GQ+A E++NRPQG LPS  + P   GKE CKA+TLRS
Subjt:  ---PTQQQLQKNFQQVPVQSQESN-LETLMKEYMARNDVAVRNLEVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCCAGATCAAGGCCATCCATAGCATGATGATGGGCATGACCATGAACAATCAAGCCAACATAACCTCTGTCAATGTTGTCTCTTCTCTCTGTTGTGAAATATG
TGGTGAGGAACACATCGCTGATAATTGTCCACTAAATCCAGCATCTGTTTTTTATGCAGCCGGGTCAAGTAATTCCAACACTCATCAATTTGGAAAACAGCCTACACAAC
AACAGCTGCAGAAAAACTTCCAACAAGTTCCAGTGCAGAGTCAAGAGTCAAATCTAGAGACTCTTATGAAGGAGTACATGGCAAGGAATGATGTTGCAGTAAGGAACTTG
GAAGTTCAGCTTGGACAAATTGCTCAAGAGATTAAGAATAGACCTCAAGGGACGTTGCCTAGCAAGACCGAGATCCCTCACAGAGAAGGCAAGGAACAATGCAAGGCAGT
GACCTTAAGAAGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCCAGATCAAGGCCATCCATAGCATGATGATGGGCATGACCATGAACAATCAAGCCAACATAACCTCTGTCAATGTTGTCTCTTCTCTCTGTTGTGAAATATG
TGGTGAGGAACACATCGCTGATAATTGTCCACTAAATCCAGCATCTGTTTTTTATGCAGCCGGGTCAAGTAATTCCAACACTCATCAATTTGGAAAACAGCCTACACAAC
AACAGCTGCAGAAAAACTTCCAACAAGTTCCAGTGCAGAGTCAAGAGTCAAATCTAGAGACTCTTATGAAGGAGTACATGGCAAGGAATGATGTTGCAGTAAGGAACTTG
GAAGTTCAGCTTGGACAAATTGCTCAAGAGATTAAGAATAGACCTCAAGGGACGTTGCCTAGCAAGACCGAGATCCCTCACAGAGAAGGCAAGGAACAATGCAAGGCAGT
GACCTTAAGAAGTGATTAG
Protein sequenceShow/hide protein sequence
MQAQIKAIHSMMMGMTMNNQANITSVNVVSSLCCEICGEEHIADNCPLNPASVFYAAGSSNSNTHQFGKQPTQQQLQKNFQQVPVQSQESNLETLMKEYMARNDVAVRNL
EVQLGQIAQEIKNRPQGTLPSKTEIPHREGKEQCKAVTLRSD