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Lag0036180 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036180
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:41050201..41050728
RNA-Seq ExpressionLag0036180
SyntenyLag0036180
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.6e-2736.53Show/hide
Query:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFD
        +L+E+W    LT  ED I+ D+D +A++ T + L   LI KL S   ++  V++ T K AW++D +   V+++G N+F+F F     R R+L  GPW FD
Subjt:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFD

Query:  KSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGAC
        ++L+I++  +   KP +  F  V+ W+HF D+ L      MA RLGN +G + DV+++ +   WG+C
Subjt:  KSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGAC

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.0e-3041.42Show/hide
Query:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPW
        MD  +L+ DW K  LT  ED+I+ DVD +A+    Q L   L+GKL +   ++ +V+ +    AW+++  L VE +GKNLF+F F  E    RV+  GPW
Subjt:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPW

Query:  LFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA
         FDK+L++L+     +  SE  F +VAFWIH  D+P+      MA RLGN +G +VDVD +     WGA
Subjt:  LFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-2033.53Show/hide
Query:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGP
        M    L+E+W    LT  E++ + DVD +A   T   L   L+GKL     +   VM+ T + AW+++     V+ LG NLF+F F     R ++   GP
Subjt:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGP

Query:  WLFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA
        W FD++L+++   +    PSE  F ++  W+ F D+PL     +MA RLGN LG + + D  +    WG+
Subjt:  WLFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]4.2e-2035.93Show/hide
Query:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLG---CCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWL
        SL++    LSLT  ED     V R   + TS ++G    CL+GKL +      E M+ T  + WQ  +G+ V ++G NLF+F F     + RVL+ GPW 
Subjt:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLG---CCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWL

Query:  FDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWG
        FDK LL+L  +    +PS+    +V FW+H  ++PL L   ++ E +GN +G+++D+D  +    WG
Subjt:  FDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWG

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.2e-2036.53Show/hide
Query:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLG---CCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWL
        SLV+    LSLT  ED     V R   D TS ++G    CL+GKL +      E M+ T  + WQ  +G+ V ++G NLF+F F     + RVL+ GPW 
Subjt:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLG---CCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWL

Query:  FDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWG
        FDK LL+L  +    +PS+     V FW+H  ++PL L   ++ + +GN +G+++D+D  +    WG
Subjt:  FDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWG

TrEMBL top hitse value%identityAlignment
A0A2N9EEA9 CCHC-type domain-containing protein2.0e-2034.52Show/hide
Query:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPW
        MD  +L++DW K SLT+ ++   FDV+ +AM  + +L   CL+GKL +  +     ++ T    W   +G+    +  NLF+FQF + ++R RVL+  PW
Subjt:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPW

Query:  LFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWG
        LFD  LLIL  +      S+    +  FW+    IPL     E  ER+G++ GE + VD       WG
Subjt:  LFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.2e-2736.53Show/hide
Query:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFD
        +L+E+W    LT  ED I+ D+D +A++ T + L   LI KL S   ++  V++ T K AW++D +   V+++G N+F+F F     R R+L  GPW FD
Subjt:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFD

Query:  KSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGAC
        ++L+I++  +   KP +  F  V+ W+HF D+ L      MA RLGN +G + DV+++ +   WG+C
Subjt:  KSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGAC

A0A6J1DU55 uncharacterized protein LOC1110231359.7e-3141.42Show/hide
Query:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPW
        MD  +L+ DW K  LT  ED+I+ DVD +A+    Q L   L+GKL +   ++ +V+ +    AW+++  L VE +GKNLF+F F  E    RV+  GPW
Subjt:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPW

Query:  LFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA
         FDK+L++L+     +  SE  F +VAFWIH  D+P+      MA RLGN +G +VDVD +     WGA
Subjt:  LFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA

A0A6J1DX30 uncharacterized protein LOC1110248745.4e-2133.53Show/hide
Query:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGP
        M    L+E+W    LT  E++ + DVD +A   T   L   L+GKL     +   VM+ T + AW+++     V+ LG NLF+F F     R ++   GP
Subjt:  MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQID-QGLHVELLGKNLFIFQFLSEEKRVRVLNQGP

Query:  WLFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA
        W FD++L+++   +    PSE  F ++  W+ F D+PL     +MA RLGN LG + + D  +    WG+
Subjt:  WLFDKSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGA

A0A803MW53 Uncharacterized protein4.8e-2233.93Show/hide
Query:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQL-LGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFD
        SL++DW +L LT  E+ I    D +  +  S   +   L+GKL +      E M++  K  W+ID  + +  +  N+F+FQF + + R +VL   PW+FD
Subjt:  SLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQL-LGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFD

Query:  KSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGACW
          +L+L+ +   ++PSE SF    FWI  LD+P  +  S +A  +GN +GE +DVD  +       CW
Subjt:  KSLLILEFLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGACW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTCTATCCCTGGTTGAGGACTGGTCCAAGTTGAGTCTTACTCAAATTGAGGATGACATTTCCTTTGATGTTGACCGCAACGCTATGGATCGAACAAGCCAATT
GTTGGGATGTTGCCTCATTGGTAAGTTGCAATCTCACTGCTTCTTGGCGACAGAAGTCATGAGAAAGACGTTCAAGGCGGCTTGGCAGATTGACCAAGGGCTCCATGTTG
AATTATTGGGTAAGAACCTTTTTATCTTTCAATTTCTGTCTGAAGAGAAACGAGTTCGAGTCTTGAATCAAGGTCCATGGCTTTTTGATAAGTCGCTTCTGATCCTGGAA
TTTCTGATCCGCGGTCAGAAACCCTCGGAGTATAGCTTCTTGCAGGTGGCCTTCTGGATCCATTTTTTAGATATCCCTTTGGACTTGTATTATTCGGAAATGGCTGAACG
TTTGGGTAATGTGTTGGGTGAGTATGTTGATGTGGACAACCACAACGATTTTCATTTTTGGGGTGCTTGCTGGTGCGTCGTCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTCTATCCCTGGTTGAGGACTGGTCCAAGTTGAGTCTTACTCAAATTGAGGATGACATTTCCTTTGATGTTGACCGCAACGCTATGGATCGAACAAGCCAATT
GTTGGGATGTTGCCTCATTGGTAAGTTGCAATCTCACTGCTTCTTGGCGACAGAAGTCATGAGAAAGACGTTCAAGGCGGCTTGGCAGATTGACCAAGGGCTCCATGTTG
AATTATTGGGTAAGAACCTTTTTATCTTTCAATTTCTGTCTGAAGAGAAACGAGTTCGAGTCTTGAATCAAGGTCCATGGCTTTTTGATAAGTCGCTTCTGATCCTGGAA
TTTCTGATCCGCGGTCAGAAACCCTCGGAGTATAGCTTCTTGCAGGTGGCCTTCTGGATCCATTTTTTAGATATCCCTTTGGACTTGTATTATTCGGAAATGGCTGAACG
TTTGGGTAATGTGTTGGGTGAGTATGTTGATGTGGACAACCACAACGATTTTCATTTTTGGGGTGCTTGCTGGTGCGTCGTCAGCTGA
Protein sequenceShow/hide protein sequence
MDPLSLVEDWSKLSLTQIEDDISFDVDRNAMDRTSQLLGCCLIGKLQSHCFLATEVMRKTFKAAWQIDQGLHVELLGKNLFIFQFLSEEKRVRVLNQGPWLFDKSLLILE
FLIRGQKPSEYSFLQVAFWIHFLDIPLDLYYSEMAERLGNVLGEYVDVDNHNDFHFWGACWCVVS